Literature DB >> 26249677

In vivo protein crystallization in combination with highly brilliant radiation sources offers novel opportunities for the structural analysis of post-translationally modified eukaryotic proteins.

Michael Duszenko1, Lars Redecke2, Celestin Nzanzu Mudogo1, Benjamin Philip Sommer1, Stefan Mogk1, Dominik Oberthuer3, Christian Betzel4.   

Abstract

During the last decade, the number of three-dimensional structures solved by X-ray crystallography has increased dramatically. By 2014, it had crossed the landmark of 100 000 biomolecular structures deposited in the Protein Data Bank. This tremendous increase in successfully crystallized proteins is primarily owing to improvements in cloning strategies, the automation of the crystallization process and new innovative approaches to monitor crystallization. However, these improvements are mainly restricted to soluble proteins, while the crystallization and structural analysis of membrane proteins or proteins that undergo major post-translational modifications remains challenging. In addition, the need for relatively large crystals for conventional X-ray crystallography usually prevents the analysis of dynamic processes within cells. Thus, the advent of high-brilliance synchrotron and X-ray free-electron laser (XFEL) sources and the establishment of serial crystallography (SFX) have opened new avenues in structural analysis using crystals that were formerly unusable. The successful structure elucidation of cathepsin B, accomplished by the use of microcrystals obtained by in vivo crystallization in baculovirus-infected Sf9 insect cells, clearly proved that crystals grown intracellularly are very well suited for X-ray analysis. Here, methods by which in vivo crystals can be obtained, isolated and used for structural analysis by novel highly brilliant XFEL and synchrotron-radiation sources are summarized and discussed.

Entities:  

Keywords:  X-ray free-electron laser; expression systems; in vivo crystallization; serial femtosecond crystallography

Mesh:

Substances:

Year:  2015        PMID: 26249677      PMCID: PMC4528919          DOI: 10.1107/S2053230X15011450

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.056


  38 in total

1.  Potential for biomolecular imaging with femtosecond X-ray pulses.

Authors:  R Neutze; R Wouts; D van der Spoel; E Weckert; J Hajdu
Journal:  Nature       Date:  2000-08-17       Impact factor: 49.962

2.  Successful production of pseudotyped rAAV vectors using a modified baculovirus expression system.

Authors:  Erik Kohlbrenner; George Aslanidi; Kevin Nash; Stanislav Shklyaev; Martha Campbell-Thompson; Barry J Byrne; Richard O Snyder; Nicholas Muzyczka; Kenneth H Warrington; Sergei Zolotukhin
Journal:  Mol Ther       Date:  2005-10-06       Impact factor: 11.454

3.  The atomic structure of baculovirus polyhedra reveals the independent emergence of infectious crystals in DNA and RNA viruses.

Authors:  Fasséli Coulibaly; Elaine Chiu; Sascha Gutmann; Chitra Rajendran; Peter W Haebel; Keiko Ikeda; Hajime Mori; Vernon K Ward; Clemens Schulze-Briese; Peter Metcalf
Journal:  Proc Natl Acad Sci U S A       Date:  2009-12-10       Impact factor: 11.205

4.  Structure of the full-length insecticidal protein Cry1Ac reveals intriguing details of toxin packaging into in vivo formed crystals.

Authors:  Artem G Evdokimov; Farhad Moshiri; Eric J Sturman; Timothy J Rydel; Meiying Zheng; Jeffrey W Seale; Sonya Franklin
Journal:  Protein Sci       Date:  2014-09-02       Impact factor: 6.725

5.  Evidence for phosphorylation and ubiquitinylation of the turnip yellow mosaic virus RNA-dependent RNA polymerase domain expressed in a baculovirus-insect cell system.

Authors:  F Héricourt; S Blanc; V Redeker; I Jupin
Journal:  Biochem J       Date:  2000-07-15       Impact factor: 3.857

Review 6.  Bacillus thuringiensis and its pesticidal crystal proteins.

Authors:  E Schnepf; N Crickmore; J Van Rie; D Lereclus; J Baum; J Feitelson; D R Zeigler; D H Dean
Journal:  Microbiol Mol Biol Rev       Date:  1998-09       Impact factor: 11.056

7.  N-glycosylation of recombinant human interferon-gamma produced in different animal expression systems.

Authors:  D C James; R B Freedman; M Hoare; O W Ogonah; B C Rooney; O A Larionov; V N Dobrovolsky; O V Lagutin; N Jenkins
Journal:  Biotechnology (N Y)       Date:  1995-06

8.  The Coherent X-ray Imaging instrument at the Linac Coherent Light Source.

Authors:  Mengning Liang; Garth J Williams; Marc Messerschmidt; M Marvin Seibert; Paul A Montanez; Matt Hayes; Despina Milathianaki; Andrew Aquila; Mark S Hunter; Jason E Koglin; Donald W Schafer; Serge Guillet; Armin Busse; Robert Bergan; William Olson; Kay Fox; Nathaniel Stewart; Robin Curtis; Alireza Alan Miahnahri; Sébastien Boutet
Journal:  J Synchrotron Radiat       Date:  2015-04-15       Impact factor: 2.616

9.  The chemistry of insect hemolymph; organic components of the hemolymph of the silkworm, Bombyx mori, and two other species.

Authors:  G R WYATT; T C LOUGHHEED; S S WYATT
Journal:  J Gen Physiol       Date:  1956-07-20       Impact factor: 4.086

10.  Serial crystallography on in vivo grown microcrystals using synchrotron radiation.

Authors:  Cornelius Gati; Gleb Bourenkov; Marco Klinge; Dirk Rehders; Francesco Stellato; Dominik Oberthür; Oleksandr Yefanov; Benjamin P Sommer; Stefan Mogk; Michael Duszenko; Christian Betzel; Thomas R Schneider; Henry N Chapman; Lars Redecke
Journal:  IUCrJ       Date:  2014-02-10       Impact factor: 4.769

View more
  2 in total

1.  Microcrystallography of Protein Crystals and In Cellulo Diffraction.

Authors:  Marion Boudes; Damià Garriga; Fasséli Coulibaly
Journal:  J Vis Exp       Date:  2017-07-21       Impact factor: 1.355

2.  In cellulo crystallization of Trypanosoma brucei IMP dehydrogenase enables the identification of genuine co-factors.

Authors:  Karol Nass; Lars Redecke; M Perbandt; O Yefanov; M Klinge; R Koopmann; F Stellato; A Gabdulkhakov; R Schönherr; D Rehders; J M Lahey-Rudolph; A Aquila; A Barty; S Basu; R B Doak; R Duden; M Frank; R Fromme; S Kassemeyer; G Katona; R Kirian; H Liu; I Majoul; J M Martin-Garcia; M Messerschmidt; R L Shoeman; U Weierstall; S Westenhoff; T A White; G J Williams; C H Yoon; N Zatsepin; P Fromme; M Duszenko; H N Chapman; C Betzel
Journal:  Nat Commun       Date:  2020-01-30       Impact factor: 14.919

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.