Literature DB >> 20007786

The atomic structure of baculovirus polyhedra reveals the independent emergence of infectious crystals in DNA and RNA viruses.

Fasséli Coulibaly1, Elaine Chiu, Sascha Gutmann, Chitra Rajendran, Peter W Haebel, Keiko Ikeda, Hajime Mori, Vernon K Ward, Clemens Schulze-Briese, Peter Metcalf.   

Abstract

Baculoviruses are ubiquitous insect viruses well known for their use as bioinsecticides, gene therapy vectors, and protein expression systems. Overexpression of recombinant proteins in insect cell culture utilizes the strong promoter of the polyhedrin gene. In infected larvae, the polyhedrin protein forms robust intracellular crystals called polyhedra, which protect encased virions for prolonged periods in the environment. Polyhedra are produced by two unrelated families of insect viruses, baculoviruses and cypoviruses. The atomic structure of cypovirus polyhedra revealed an intricate packing of trimers, which are interconnected by a projecting N-terminal helical arm of the polyhedrin molecule. Baculovirus and cypovirus polyhedra share nearly identical lattices, and the N-terminal region of the otherwise unrelated baculovirus polyhedrin protein sequence is also predicted to be alpha-helical. These results suggest homology between the proteins and a common structural basis for viral polyhedra. Here, we present the 2.2-A structure of baculovirus polyhedra determined by x-ray crystallography from microcrystals produced in vivo. We show that the underlying molecular organization is, in fact, very different. Although both polyhedra have nearly identical unit cell dimensions and share I23 symmetry, the polyhedrin molecules are structurally unrelated and pack differently in the crystals. In particular, disulfide bonds and domain-swapped N-terminal domains stabilize the building blocks of baculovirus polyhedra and interlocking C-terminal arms join unit cells together. We show that the N-terminal projecting helical arms have different structural roles in baculovirus and cypovirus polyhedra and conclude that there is no structural evidence for a common evolutionary origin for both classes of polyhedra.

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Year:  2009        PMID: 20007786      PMCID: PMC2799703          DOI: 10.1073/pnas.0910686106

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  27 in total

1.  Viral evolution revealed by bacteriophage PRD1 and human adenovirus coat protein structures.

Authors:  S D Benson; J K Bamford; D H Bamford; R M Burnett
Journal:  Cell       Date:  1999-09-17       Impact factor: 41.582

2.  Structure of simian virus 40 at 3.8-A resolution.

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Journal:  Nature       Date:  1991-11-28       Impact factor: 49.962

3.  Formation of transitory intrachain and interchain disulfide bonds accompanies the folding and oligomerization of simian virus 40 Vp1 in the cytoplasm.

Authors:  Peggy P Li; Akira Nakanishi; Sean W Clark; Harumi Kasamatsu
Journal:  Proc Natl Acad Sci U S A       Date:  2002-01-22       Impact factor: 11.205

Review 4.  Small is beautiful: protein micro-crystallography.

Authors:  S Cusack; H Belrhali; A Bram; M Burghammer; A Perrakis; C Riekel
Journal:  Nat Struct Biol       Date:  1998-08

5.  Examination of New Zealand's endemic Wiseana nucleopolyhedrovirus by analysis of the viral polyhedrin gene.

Authors:  T Sadler; V Ward; T Glare; J Kalmakoff
Journal:  Arch Virol       Date:  1998       Impact factor: 2.574

6.  3D domain swapping modulates the stability of members of an icosahedral virus group.

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Journal:  Structure       Date:  2000-10-15       Impact factor: 5.006

Review 7.  Polyhedrin structure.

Authors:  G F Rohrmann
Journal:  J Gen Virol       Date:  1986-08       Impact factor: 3.891

8.  A phosphorylated 34-kDa protein and a subpopulation of polyhedrin are thiol linked to the carbohydrate layer surrounding a baculovirus occlusion body.

Authors:  M A Whitt; J S Manning
Journal:  Virology       Date:  1988-03       Impact factor: 3.616

9.  Disulfide bonding among micro 1 trimers in mammalian reovirus outer capsid: a late and reversible step in virion morphogenesis.

Authors:  Amy L Odegard; Kartik Chandran; Susanne Liemann; Stephen C Harrison; Max L Nibert
Journal:  J Virol       Date:  2003-05       Impact factor: 5.103

10.  Polyhedrin sequence determines the tetrahedral shape of occlusion bodies in Thysanoplusia orichalcea single-nucleocapsid nucleopolyhedrovirus.

Authors:  X W Cheng; G R Carner; H W Fescemyer
Journal:  J Gen Virol       Date:  1998-10       Impact factor: 3.891

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  30 in total

Review 1.  Host cell processes to accomplish mechanical and non-circulative virus transmission.

Authors:  Aurélie Bak; Sarah L Irons; Alexandre Martinière; Stéphane Blanc; Martin Drucker
Journal:  Protoplasma       Date:  2011-10-09       Impact factor: 3.356

2.  Immobilization of foreign protein into polyhedra of Bombyx mori nucleopolyhedrovirus (BmNPV).

Authors:  Xing-wei Xiang; Rui Yang; Lin Chen; Xiao-long Hu; Shao-fang Yu; Cui-ping Cao; Xiao-feng Wu
Journal:  J Zhejiang Univ Sci B       Date:  2012-02       Impact factor: 3.066

Review 3.  In vivo protein crystallization in combination with highly brilliant radiation sources offers novel opportunities for the structural analysis of post-translationally modified eukaryotic proteins.

Authors:  Michael Duszenko; Lars Redecke; Celestin Nzanzu Mudogo; Benjamin Philip Sommer; Stefan Mogk; Dominik Oberthuer; Christian Betzel
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2015-07-29       Impact factor: 1.056

4.  Structure of a baculovirus sulfhydryl oxidase, a highly divergent member of the erv flavoenzyme family.

Authors:  Motti Hakim; Amitai Mandelbaum; Deborah Fass
Journal:  J Virol       Date:  2011-07-13       Impact factor: 5.103

5.  Structural basis for the enhancement of virulence by viral spindles and their in vivo crystallization.

Authors:  Elaine Chiu; Marcel Hijnen; Richard D Bunker; Marion Boudes; Chitra Rajendran; Kaheina Aizel; Vincent Oliéric; Clemens Schulze-Briese; Wataru Mitsuhashi; Vivienne Young; Vernon K Ward; Max Bergoin; Peter Metcalf; Fasséli Coulibaly
Journal:  Proc Natl Acad Sci U S A       Date:  2015-03-18       Impact factor: 11.205

6.  Atomic structure of granulin determined from native nanocrystalline granulovirus using an X-ray free-electron laser.

Authors:  Cornelius Gati; Dominik Oberthuer; Oleksandr Yefanov; Richard D Bunker; Francesco Stellato; Elaine Chiu; Shin-Mei Yeh; Andrew Aquila; Shibom Basu; Richard Bean; Kenneth R Beyerlein; Sabine Botha; Sébastien Boutet; Daniel P DePonte; R Bruce Doak; Raimund Fromme; Lorenzo Galli; Ingo Grotjohann; Daniel R James; Christopher Kupitz; Lukas Lomb; Marc Messerschmidt; Karol Nass; Kimberly Rendek; Robert L Shoeman; Dingjie Wang; Uwe Weierstall; Thomas A White; Garth J Williams; Nadia A Zatsepin; Petra Fromme; John C H Spence; Kenneth N Goldie; Johannes A Jehle; Peter Metcalf; Anton Barty; Henry N Chapman
Journal:  Proc Natl Acad Sci U S A       Date:  2017-02-15       Impact factor: 11.205

7.  Improving Baculovirus Infectivity by Efficiently Embedding Enhancing Factors into Occlusion Bodies.

Authors:  Shili Yang; Lijuan Zhao; Ruipeng Ma; Wei Fang; Jia Hu; Chengfeng Lei; Xiulian Sun
Journal:  Appl Environ Microbiol       Date:  2017-06-30       Impact factor: 4.792

8.  Ultratight crystal packing of a 10 kDa protein.

Authors:  Sergio Trillo-Muyo; Andrius Jasilionis; Marcin J Domagalski; Maksymilian Chruszcz; Wladek Minor; Nomeda Kuisiene; Joan L Arolas; Maria Solà; F Xavier Gomis-Rüth
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2013-02-16

9.  Three Conserved Regions in Baculovirus Sulfhydryl Oxidase P33 Are Critical for Enzymatic Activity and Function.

Authors:  Wenhua Kuang; Huanyu Zhang; Manli Wang; Ning-Yi Zhou; Fei Deng; Hualin Wang; Peng Gong; Zhihong Hu
Journal:  J Virol       Date:  2017-11-14       Impact factor: 5.103

10.  Nonvirus encoded proteins could be embedded into Bombyx mori cypovirus polyhedra.

Authors:  Yi-Ling Zhang; Ren-Yu Xue; Guang-Li Cao; Xiang-Kun Meng; Yue-Xiong Zhu; Zhong-Hua Pan; Cheng-Liang Gong
Journal:  Mol Biol Rep       Date:  2014-01-28       Impact factor: 2.316

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