Literature DB >> 31123771

Moving forward one step back at a time: reversibility during homologous recombination.

Aurèle Piazza1, Wolf-Dietrich Heyer2,3.   

Abstract

DNA double-strand breaks are genotoxic lesions whose repair can be templated off an intact DNA duplex through the conserved homologous recombination (HR) pathway. Because it mainly consists of a succession of non-covalent associations of molecules, HR is intrinsically reversible. Reversibility serves as an integral property of HR, exploited and tuned at various stages throughout the pathway with anti- and pro-recombinogenic consequences. Here, we focus on the reversibility of displacement loops (D-loops), a central DNA joint molecule intermediate whose dynamics and regulation have recently been physically probed in somatic S. cerevisiae cells. From homology search to repair completion, we discuss putative roles of D-loop reversibility in repair fidelity and outcome.

Entities:  

Keywords:  Crossover; D-loop; Genomic stability; Helicase; Homologous recombination; Homology search

Year:  2019        PMID: 31123771      PMCID: PMC7027933          DOI: 10.1007/s00294-019-00995-7

Source DB:  PubMed          Journal:  Curr Genet        ISSN: 0172-8083            Impact factor:   3.886


  68 in total

1.  Double-strand breaks associated with repetitive DNA can reshape the genome.

Authors:  Juan Lucas Argueso; James Westmoreland; Piotr A Mieczkowski; Malgorzata Gawel; Thomas D Petes; Michael A Resnick
Journal:  Proc Natl Acad Sci U S A       Date:  2008-08-13       Impact factor: 11.205

Review 2.  Sources of DNA double-strand breaks and models of recombinational DNA repair.

Authors:  Anuja Mehta; James E Haber
Journal:  Cold Spring Harb Perspect Biol       Date:  2014-08-07       Impact factor: 10.005

3.  ATP hydrolysis Promotes Duplex DNA Release by the RecA Presynaptic Complex.

Authors:  Ja Yil Lee; Zhi Qi; Eric C Greene
Journal:  J Biol Chem       Date:  2016-09-01       Impact factor: 5.157

Review 4.  Multi-Invasion-Induced Rearrangements as a Pathway for Physiological and Pathological Recombination.

Authors:  Aurèle Piazza; Wolf-Dietrich Heyer
Journal:  Bioessays       Date:  2018-03-26       Impact factor: 4.345

5.  Homology search and choice of homologous partner during mitotic recombination.

Authors:  O Inbar; M Kupiec
Journal:  Mol Cell Biol       Date:  1999-06       Impact factor: 4.272

6.  Double Holliday junctions are intermediates of DNA break repair.

Authors:  Malgorzata Bzymek; Nathaniel H Thayer; Steve D Oh; Nancy Kleckner; Neil Hunter
Journal:  Nature       Date:  2010-03-28       Impact factor: 49.962

7.  Evidence for multiple cycles of strand invasion during repair of double-strand gaps in Drosophila.

Authors:  Mitch McVey; Melissa Adams; Eric Staeva-Vieira; Jeff J Sekelsky
Journal:  Genetics       Date:  2004-06       Impact factor: 4.562

8.  Sgs1 and Mph1 Helicases Enforce the Recombination Execution Checkpoint During DNA Double-Strand Break Repair in Saccharomyces cerevisiae.

Authors:  Suvi Jain; Neal Sugawara; Anuja Mehta; Taehyun Ryu; James E Haber
Journal:  Genetics       Date:  2016-04-13       Impact factor: 4.562

9.  The logic and mechanism of homologous recombination partner choice.

Authors:  Soogil Hong; Youngjin Sung; Mi Yu; Minsu Lee; Nancy Kleckner; Keun P Kim
Journal:  Mol Cell       Date:  2013-08-22       Impact factor: 17.970

10.  The FANCM ortholog Fml1 promotes recombination at stalled replication forks and limits crossing over during DNA double-strand break repair.

Authors:  Weili Sun; Saikat Nandi; Fekret Osman; Jong Sook Ahn; Jovana Jakovleska; Alexander Lorenz; Matthew C Whitby
Journal:  Mol Cell       Date:  2008-10-10       Impact factor: 17.970

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  16 in total

1.  Genetic Characterization of Three Distinct Mechanisms Supporting RNA-Driven DNA Repair and Modification Reveals Major Role of DNA Polymerase ζ.

Authors:  Chance Meers; Havva Keskin; Gabor Banyai; Olga Mazina; Taehwan Yang; Alli L Gombolay; Kuntal Mukherjee; Efiyenia I Kaparos; Gary Newnam; Alexander Mazin; Francesca Storici
Journal:  Mol Cell       Date:  2020-09-02       Impact factor: 17.970

Review 2.  Origin matters: spontaneous DNA-RNA hybrids do not form in trans as a source of genome instability.

Authors:  Belén Gómez-González; Andrés Aguilera
Journal:  Curr Genet       Date:  2020-10-23       Impact factor: 3.886

Review 3.  Emerging non-canonical roles for the Rad51-Rad52 interaction in response to double-strand breaks in yeast.

Authors:  Katrina Ngo; Esther A Epum; Katherine L Friedman
Journal:  Curr Genet       Date:  2020-05-12       Impact factor: 3.886

Review 4.  Collaborations between chromatin and nuclear architecture to optimize DNA repair fidelity.

Authors:  Beata Mackenroth; Eric Alani
Journal:  DNA Repair (Amst)       Date:  2020-11-22

5.  Homology-directed repair involves multiple strand invasion cycles in fission yeast.

Authors:  Amanda J Vines; Kenneth Cox; Bryan A Leland; Megan C King
Journal:  Mol Biol Cell       Date:  2022-01-26       Impact factor: 3.612

6.  Rad9/53BP1 promotes DNA repair via crossover recombination by limiting the Sgs1 and Mph1 helicases.

Authors:  Matteo Ferrari; Chetan C Rawal; Samuele Lodovichi; Maria Y Vietri; Achille Pellicioli
Journal:  Nat Commun       Date:  2020-06-23       Impact factor: 14.919

Review 7.  Resolvases, Dissolvases, and Helicases in Homologous Recombination: Clearing the Road for Chromosome Segregation.

Authors:  Pedro A San-Segundo; Andrés Clemente-Blanco
Journal:  Genes (Basel)       Date:  2020-01-08       Impact factor: 4.096

8.  Loss of TOP3B leads to increased R-loop formation and genome instability.

Authors:  Tao Zhang; Mathew Wallis; Vida Petrovic; Jackie Challis; Paul Kalitsis; Damien F Hudson
Journal:  Open Biol       Date:  2019-12-04       Impact factor: 6.411

9.  A mutant form of Dmc1 that bypasses the requirement for accessory protein Mei5-Sae3 reveals independent activities of Mei5-Sae3 and Rad51 in Dmc1 filament stability.

Authors:  Diedre Reitz; Jennifer Grubb; Douglas K Bishop
Journal:  PLoS Genet       Date:  2019-12-02       Impact factor: 5.917

10.  FANCJ compensates for RAP80 deficiency and suppresses genomic instability induced by interstrand cross-links.

Authors:  Sanket Awate; Joshua A Sommers; Arindam Datta; Sumeet Nayak; Marina A Bellani; Olivia Yang; Christopher A Dunn; Claudia M Nicolae; George-Lucian Moldovan; Michael M Seidman; Sharon B Cantor; Robert M Brosh
Journal:  Nucleic Acids Res       Date:  2020-09-18       Impact factor: 19.160

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