Literature DB >> 26237512

Early embryonic-like cells are induced by downregulating replication-dependent chromatin assembly.

Takashi Ishiuchi1, Rocio Enriquez-Gasca2, Eiji Mizutani3, Ana Bošković1, Celine Ziegler-Birling1, Diego Rodriguez-Terrones1, Teruhiko Wakayama3, Juan M Vaquerizas2, Maria-Elena Torres-Padilla1.   

Abstract

Cellular plasticity is essential for early embryonic cells. Unlike pluripotent cells, which form embryonic tissues, totipotent cells can generate a complete organism including embryonic and extraembryonic tissues. Cells resembling 2-cell-stage embryos (2C-like cells) arise at very low frequency in embryonic stem (ES) cell cultures. Although induced reprogramming to pluripotency is well established, totipotent cells remain poorly characterized, and whether reprogramming to totipotency is possible is unknown. We show that mouse 2C-like cells can be induced in vitro through downregulation of the chromatin-assembly activity of CAF-1. Endogenous retroviruses and genes specific to 2-cell embryos are the highest-upregulated genes upon CAF-1 knockdown. Emerging 2C-like cells exhibit molecular characteristics of 2-cell embryos and higher reprogrammability than ES cells upon nuclear transfer. Our results suggest that early embryonic-like cells can be induced by modulating chromatin assembly and that atypical histone deposition may trigger the emergence of totipotent cells.

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Year:  2015        PMID: 26237512     DOI: 10.1038/nsmb.3066

Source DB:  PubMed          Journal:  Nat Struct Mol Biol        ISSN: 1545-9985            Impact factor:   15.369


  43 in total

1.  Systems biology of the 2-cell mouse embryo.

Authors:  A V Evsikov; W N de Vries; A E Peaston; E E Radford; K S Fancher; F H Chen; J A Blake; C J Bult; K E Latham; D Solter; B B Knowles
Journal:  Cytogenet Genome Res       Date:  2004       Impact factor: 1.636

2.  Retrotransposons regulate host genes in mouse oocytes and preimplantation embryos.

Authors:  Anne E Peaston; Alexei V Evsikov; Joel H Graber; Wilhelmine N de Vries; Andrea E Holbrook; Davor Solter; Barbara B Knowles
Journal:  Dev Cell       Date:  2004-10       Impact factor: 12.270

3.  Live visualization of chromatin dynamics with fluorescent TALEs.

Authors:  Yusuke Miyanari; Céline Ziegler-Birling; Maria-Elena Torres-Padilla
Journal:  Nat Struct Mol Biol       Date:  2013-10-06       Impact factor: 15.369

4.  Simple and efficient production of embryonic stem cell-embryo chimeras by coculture.

Authors:  S A Wood; W S Pascoe; C Schmidt; R Kemler; M J Evans; N D Allen
Journal:  Proc Natl Acad Sci U S A       Date:  1993-05-15       Impact factor: 11.205

5.  Nucleosome assembly by a complex of CAF-1 and acetylated histones H3/H4.

Authors:  A Verreault; P D Kaufman; R Kobayashi; B Stillman
Journal:  Cell       Date:  1996-10-04       Impact factor: 41.582

6.  Transcriptional activation of transposable elements in mouse zygotes is independent of Tet3-mediated 5-methylcytosine oxidation.

Authors:  Azusa Inoue; Shogo Matoba; Yi Zhang
Journal:  Cell Res       Date:  2012-11-27       Impact factor: 25.617

7.  Stepwise assembly of chromatin during DNA replication in vitro.

Authors:  S Smith; B Stillman
Journal:  EMBO J       Date:  1991-04       Impact factor: 11.598

8.  CAF-1 is essential for heterochromatin organization in pluripotent embryonic cells.

Authors:  Martin Houlard; Soizik Berlivet; Aline V Probst; Jean-Pierre Quivy; Patrick Héry; Geneviève Almouzni; Matthieu Gérard
Journal:  PLoS Genet       Date:  2006-09-11       Impact factor: 5.917

9.  HTSeq--a Python framework to work with high-throughput sequencing data.

Authors:  Simon Anders; Paul Theodor Pyl; Wolfgang Huber
Journal:  Bioinformatics       Date:  2014-09-25       Impact factor: 6.937

10.  TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions.

Authors:  Daehwan Kim; Geo Pertea; Cole Trapnell; Harold Pimentel; Ryan Kelley; Steven L Salzberg
Journal:  Genome Biol       Date:  2013-04-25       Impact factor: 13.583

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  119 in total

1.  Want reprogramming? Cut back on the chromatin assembly!

Authors:  Paul D Kaufman
Journal:  Nat Struct Mol Biol       Date:  2015-09       Impact factor: 15.369

2.  Totipotency in the absence of CAF-I: unhindered choices when the chaperone is out.

Authors:  Krassimir Yankulov
Journal:  Nucleus       Date:  2015-12-28       Impact factor: 4.197

Review 3.  Molecular features of cellular reprogramming and development.

Authors:  Zachary D Smith; Camille Sindhu; Alexander Meissner
Journal:  Nat Rev Mol Cell Biol       Date:  2016-02-17       Impact factor: 94.444

4.  Deficiency of microRNA miR-34a expands cell fate potential in pluripotent stem cells.

Authors:  Yong Jin Choi; Chao-Po Lin; Davide Risso; Sean Chen; Thomas Aquinas Kim; Meng How Tan; Jin Billy Li; Yalei Wu; Caifu Chen; Zhenyu Xuan; Todd Macfarlan; Weiqun Peng; K C Kent Lloyd; Sang Yong Kim; Terence P Speed; Lin He
Journal:  Science       Date:  2017-01-12       Impact factor: 47.728

Review 5.  Mechanisms regulating zygotic genome activation.

Authors:  Katharine N Schulz; Melissa M Harrison
Journal:  Nat Rev Genet       Date:  2019-04       Impact factor: 53.242

6.  On transposons and totipotency.

Authors:  Maria-Elena Torres-Padilla
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2020-02-10       Impact factor: 6.237

7.  Transitions in cell potency during early mouse development are driven by Notch.

Authors:  Sergio Menchero; Isabel Rollan; Antonio Lopez-Izquierdo; Maria Jose Andreu; Julio Sainz de Aja; Minjung Kang; Javier Adan; Rui Benedito; Teresa Rayon; Anna-Katerina Hadjantonakis; Miguel Manzanares
Journal:  Elife       Date:  2019-04-08       Impact factor: 8.140

8.  Transient Dux expression facilitates nuclear transfer and induced pluripotent stem cell reprogramming.

Authors:  Lei Yang; Xuefei Liu; Lishuang Song; Anqi Di; Guanghua Su; Chunling Bai; Zhuying Wei; Guangpeng Li
Journal:  EMBO Rep       Date:  2020-07-27       Impact factor: 8.807

9.  Genetic mosaics and time-lapse imaging identify functions of histone H3.3 residues in mouse oocytes and embryos.

Authors:  Liquan Zhou; Boris Baibakov; Bertram Canagarajah; Bo Xiong; Jurrien Dean
Journal:  Development       Date:  2016-12-19       Impact factor: 6.868

Review 10.  Epigenetic modifications and reprogramming in paternal pronucleus: sperm, preimplantation embryo, and beyond.

Authors:  Yuki Okada; Kosuke Yamaguchi
Journal:  Cell Mol Life Sci       Date:  2017-01-03       Impact factor: 9.261

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