Literature DB >> 26212332

RING Dimerization Links Higher-Order Assembly of TRIM5α to Synthesis of K63-Linked Polyubiquitin.

Zinaida Yudina1, Amanda Roa2, Rory Johnson1, Nikolaos Biris1, Daniel A de Souza Aranha Vieira2, Vladislav Tsiperson2, Natalia Reszka2, Alexander B Taylor3, P John Hart4, Borries Demeler1, Felipe Diaz-Griffero5, Dmitri N Ivanov6.   

Abstract

Members of the tripartite motif (TRIM) protein family of RING E3 ubiquitin (Ub) ligases promote innate immune responses by catalyzing synthesis of polyubiquitin chains linked through lysine 63 (K63). Here, we investigate the mechanism by which the TRIM5α retroviral restriction factor activates Ubc13, the K63-linkage-specific E2. Structural, biochemical, and functional characterization of the TRIM5α:Ubc13-Ub interactions reveals that activation of the Ubc13-Ub conjugate requires dimerization of the TRIM5α RING domain. Our data explain how higher-order oligomerization of TRIM5α, which is promoted by the interaction with the retroviral capsid, enhances the E3 Ub ligase activity of TRIM5α and contributes to its antiretroviral function. This E3 mechanism, in which RING dimerization is transient and depends on the interaction of the TRIM protein with the ligand, is likely to be conserved in many members of the TRIM family and may have evolved to facilitate recognition of repetitive epitope patterns associated with infection.
Copyright © 2015 The Authors. Published by Elsevier Inc. All rights reserved.

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Year:  2015        PMID: 26212332      PMCID: PMC4526822          DOI: 10.1016/j.celrep.2015.06.072

Source DB:  PubMed          Journal:  Cell Rep            Impact factor:   9.423


  49 in total

1.  Structural rearrangements in the membrane penetration protein of a non-enveloped virus.

Authors:  Philip R Dormitzer; Emma B Nason; B V V Prasad; Stephen C Harrison
Journal:  Nature       Date:  2004-08-26       Impact factor: 49.962

2.  Proteasome inhibition reveals that a functional preintegration complex intermediate can be generated during restriction by diverse TRIM5 proteins.

Authors:  Jenny L Anderson; Edward M Campbell; Xiaolu Wu; Nick Vandegraaff; Alan Engelman; Thomas J Hope
Journal:  J Virol       Date:  2006-10       Impact factor: 5.103

3.  Contribution of RING domain to retrovirus restriction by TRIM5alpha depends on combination of host and virus.

Authors:  Hikoichiro Maegawa; Tadashi Miyamoto; Jun-Ichi Sakuragi; Tatsuo Shioda; Emi E Nakayama
Journal:  Virology       Date:  2010-01-29       Impact factor: 3.616

4.  Biochemical characterization of a recombinant TRIM5alpha protein that restricts human immunodeficiency virus type 1 replication.

Authors:  Charles R Langelier; Virginie Sandrin; Debra M Eckert; Devin E Christensen; Viswanathan Chandrasekaran; Steven L Alam; Christopher Aiken; John C Olsen; Alak Kanti Kar; Joseph G Sodroski; Wesley I Sundquist
Journal:  J Virol       Date:  2008-09-17       Impact factor: 5.103

5.  A B-box 2 surface patch important for TRIM5alpha self-association, capsid binding avidity, and retrovirus restriction.

Authors:  Felipe Diaz-Griffero; Xu-rong Qin; Fumiaki Hayashi; Takanori Kigawa; Andres Finzi; Zoe Sarnak; Maritza Lienlaf; Shigeyuki Yokoyama; Joseph Sodroski
Journal:  J Virol       Date:  2009-08-05       Impact factor: 5.103

6.  Rapid turnover and polyubiquitylation of the retroviral restriction factor TRIM5.

Authors:  Felipe Diaz-Griffero; Xing Li; Hassan Javanbakht; Byeongwoon Song; Sohanya Welikala; Matthew Stremlau; Joseph Sodroski
Journal:  Virology       Date:  2006-02-10       Impact factor: 3.616

7.  E2 interaction and dimerization in the crystal structure of TRAF6.

Authors:  Qian Yin; Su-Chang Lin; Betty Lamothe; Miao Lu; Yu-Chih Lo; Gregory Hura; Lixin Zheng; Rebecca L Rich; Alejandro D Campos; David G Myszka; Michael J Lenardo; Bryant G Darnay; Hao Wu
Journal:  Nat Struct Mol Biol       Date:  2009-05-24       Impact factor: 15.369

8.  The cytoplasmic body component TRIM5alpha restricts HIV-1 infection in Old World monkeys.

Authors:  Matthew Stremlau; Christopher M Owens; Michel J Perron; Michael Kiessling; Patrick Autissier; Joseph Sodroski
Journal:  Nature       Date:  2004-02-26       Impact factor: 49.962

9.  All three variable regions of the TRIM5alpha B30.2 domain can contribute to the specificity of retrovirus restriction.

Authors:  Sadayuki Ohkura; Melvyn W Yap; Tom Sheldon; Jonathan P Stoye
Journal:  J Virol       Date:  2006-09       Impact factor: 5.103

10.  Genomic analysis of the TRIM family reveals two groups of genes with distinct evolutionary properties.

Authors:  Marco Sardiello; Stefano Cairo; Bianca Fontanella; Andrea Ballabio; Germana Meroni
Journal:  BMC Evol Biol       Date:  2008-08-01       Impact factor: 3.260

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  42 in total

1.  TRIM5α-Mediated Ubiquitin Chain Conjugation Is Required for Inhibition of HIV-1 Reverse Transcription and Capsid Destabilization.

Authors:  Edward M Campbell; Jared Weingart; Paola Sette; Silvana Opp; Jaya Sastri; Sarah K O'Connor; Sarah Talley; Felipe Diaz-Griffero; Vanessa Hirsch; Fadila Bouamr
Journal:  J Virol       Date:  2015-12-16       Impact factor: 5.103

2.  K63-Linked Ubiquitin Is Required for Restriction of HIV-1 Reverse Transcription and Capsid Destabilization by Rhesus TRIM5α.

Authors:  Sabrina Imam; Sevnur Kömürlü; Jessica Mattick; Anastasia Selyutina; Sarah Talley; Amani Eddins; Felipe Diaz-Griffero; Edward M Campbell
Journal:  J Virol       Date:  2019-06-28       Impact factor: 5.103

3.  General Model for Retroviral Capsid Pattern Recognition by TRIM5 Proteins.

Authors:  Jonathan M Wagner; Devin E Christensen; Akash Bhattacharya; Daria M Dawidziak; Marcin D Roganowicz; Yueping Wan; Ruth A Pumroy; Borries Demeler; Dmitri N Ivanov; Barbie K Ganser-Pornillos; Wesley I Sundquist; Owen Pornillos
Journal:  J Virol       Date:  2018-01-30       Impact factor: 5.103

4.  To TRIM or not to TRIM: the balance of host-virus interactions mediated by the ubiquitin system.

Authors:  Adam Hage; Ricardo Rajsbaum
Journal:  J Gen Virol       Date:  2019-12       Impact factor: 3.891

5.  E3 ubiquitin-protein ligase TRIM21-mediated lysine capture by UBE2E1 reveals substrate-targeting mode of a ubiquitin-conjugating E2.

Authors:  Madhanagopal Anandapadamanaban; Nikolaos C Kyriakidis; Veronika Csizmók; Amélie Wallenhammar; Alexander C Espinosa; Alexandra Ahlner; Adam R Round; Jill Trewhella; Martin Moche; Marie Wahren-Herlenius; Maria Sunnerhagen
Journal:  J Biol Chem       Date:  2019-06-03       Impact factor: 5.157

6.  Retrovirus Restriction by TRIM5α: RINGside at a Cage Fight.

Authors:  Wesley I Sundquist; Owen Pornillos
Journal:  Cell Host Microbe       Date:  2018-12-12       Impact factor: 21.023

7.  Structure and catalytic activation of the TRIM23 RING E3 ubiquitin ligase.

Authors:  Daria M Dawidziak; Jacint G Sanchez; Jonathan M Wagner; Barbie K Ganser-Pornillos; Owen Pornillos
Journal:  Proteins       Date:  2017-07-24

8.  Dynamic conformational changes in the rhesus TRIM5α dimer dictate the potency of HIV-1 restriction.

Authors:  Rajan Lamichhane; Santanu Mukherjee; Nikolai Smolin; Raymond F Pauszek; Margret Bradley; Jaya Sastri; Seth L Robia; David Millar; Edward M Campbell
Journal:  Virology       Date:  2016-11-04       Impact factor: 3.616

9.  Rhesus monkey TRIM5α protein SPRY domain contributes to AP-1 activation.

Authors:  Lei Na; Yan-Dong Tang; Cuihui Wang; Cong Liu; Xiaojun Wang
Journal:  J Biol Chem       Date:  2017-12-01       Impact factor: 5.157

10.  TRIM5α Degradation via Autophagy Is Not Required for Retroviral Restriction.

Authors:  Sabrina Imam; Sarah Talley; Rachel S Nelson; Adarsh Dharan; Christopher O'Connor; Thomas J Hope; Edward M Campbell
Journal:  J Virol       Date:  2016-01-13       Impact factor: 5.103

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