| Literature DB >> 26172121 |
Lakshmana Ayaru1, Petros-Pavlos Ypsilantis2, Abigail Nanapragasam1, Ryan Chang-Ho Choi1, Anish Thillanathan1, Lee Min-Ho1, Giovanni Montana2.
Abstract
BACKGROUND: There are no widely used models in clinical care to predict outcome in acute lower gastro-intestinal bleeding (ALGIB). If available these could help triage patients at presentation to appropriate levels of care/intervention and improve medical resource utilisation. We aimed to apply a state-of-the-art machine learning classifier, gradient boosting (GB), to predict outcome in ALGIB using non-endoscopic measurements as predictors.Entities:
Mesh:
Year: 2015 PMID: 26172121 PMCID: PMC4501707 DOI: 10.1371/journal.pone.0132485
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Baseline Variables at initial ALGIB presentation.
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| Age |
| Gender |
|
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| Use of omeprazole/lansoprazole |
| Use of NSAID drugs/antocoagulants |
| Alcoholism |
| Smoking |
| Nursing home resident |
| Colorectal polyp |
| Haemorrhoids |
| Diverticular disease history |
| Colonic AVM |
| Syncope |
|
|
| Cardiovascular disease |
| Hypertension |
| Stroke history |
| COPD |
| Chronic renal failure |
| Diabetes mellitus |
| Dementia |
| Cancer |
| Chronic liver diease |
| Previous GI bleed history |
| Unstable comorbidities |
|
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| Heart rate |
| Systolic BP |
| Diastolic BP |
| Erratic mental status |
| Abdominal pain |
| Tender abdominal exam |
| Ongoing bleed in ED |
| Gross blood on DRE |
|
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| Haemaglobin |
| Haematocrit |
| White blood cell count |
| Platelet |
| APTT |
| Prothrombin time |
| Urea |
| Creatinine |
APTT, activated partial prothrombin time; AVM, arteriovenous malformation; DRE, digital rectal examination; ED emergency department
Characteristics and outcomes of cohorts.
| Characteristic | Charing Cross (n = 170) | Hammersmith (n = 130) | P value |
|---|---|---|---|
| Male | 90 (53%) | 69 (53%) | ns |
| Median Age (range) | 70 (16–99) | 70 (17–101) | ns |
| Discharge within 24 hrs | 4 (2%) | 0 (0%) | ns |
| Median, mean hospital stay (range) | 4, 7 (0–102) | 4, 7 (0–182) | ns |
| Blood cell transfusion | 58 (34%) | 23 (18%) | 0.001 |
| Had lower GI Endoscopy | 125 (74%) | 105 (81%) | ns |
|
| |||
| Severe bleeding | 60 (35%) | 28 (22%) | 0.01 |
| Recurrent bleeding | 34 (20%) | 19 (14%) | ns |
| Therapeutic intervention | 26 (15%) | 9 (7%) | 0.02 |
| endoscopic | 9 (5%) | 4 (3%) | ns |
| angiographic | 9 (5%) | 4 (3%) | ns |
| surgery | 8 (4.7%) | 1 (0.7%) | ns |
| Death | 4 (2.3%) | 3 (2.3%) | ns |
ns-not significant
Final Diagnoses in Cohorts.
| Charing Cross (n = 170) | Hammersmith (n = 130) | |
|---|---|---|
|
| ||
| Diverticulosis and its complications | 13 | 16 |
| Colitis | 14 | 5 |
| Anorectal (including varices) | 6 | 12 |
| Neoplasia and post-neoplasia therapy | 14 | 5 |
| Angiodysplasia | 3 | 4 |
| Isolated large bowel ulcers | 3 | 1 |
| Coagulation disorders | 1 | 0 |
| Small bowel bleeding | 1 | 1 |
|
| ||
| Diverticulosis and its complications | 44 | 13 |
| Colitis | 11 | 11 |
| Anorectal (including varices) | 11 | 9 |
| Neoplasia and post-neoplasia therapy | 2 | 4 |
| Angiodysplasia | 3 | 2 |
| Coagulation disorders | 0 | 1 |
| solated large bowel ulcers | 4 | 0 |
| Small bowel bleed | 1 | 0 |
|
| 39 | 46 |
* significant difference between cohorts p<0.05
Predictive performance of models in Charing Cross (CXC) and Hammersmith (HC) cohorts.
| Outcome variable | Accuracy | Sensitivity | Specificity | PPV | NPV |
|---|---|---|---|---|---|
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| CXC | 88 | 67 | 91 | 50 | 95 |
| HC | 88 | 57 | 91 | 50 | 94 |
|
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| CXH | 88 | 80 | 89 | 44 | 98 |
| HC | 91 | 60 | 92 | 27 | 98 |
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| CXH | 78 | 73 | 80 | 61 | 88 |
| HC | 83 | 57 | 89 | 58 | 90 |
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| CXC | 74 | 22 | 85 | 25 | 83 |
| HC | 83 | 20 | 85 | 6 | 95 |
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| CXC | 74 | 16 | 82 | 11 | 97 |
| HC | 87 | 20 | 90 | 9 | 96 |
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| CXC | 62 | 46 | 69 | 39 | 75 |
| HC | 71 | 35 | 83 | 42 | 80 |
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| Recurrent bleeding | 64 | 24 | 75 | 21 | 77 |
| Therapeutic intervention | 68 | 27.5 | 76 | 19 | 84 |
| Severe bleeding | 63 | 33 | 79 | 44 | 69 |
|
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| Recurrent bleeding | 78 | 16 | 94 | 33 | 81 |
| Therapeutic intervention | 78 | 4 | 92 | 8 | 84 |
| Severe bleeding | 67 | 13 | 96 | 66 | 66 |
Top ten variable importance using gradient boosting models.
| Contribution % | |
|---|---|
|
| |
| Platelet count | 13.4 |
| APTT | 13.0 |
| Haematocrit | 12.4 |
| Urea | 10.9 |
| Creatinine | 9.7 |
| Prothrombin time | 8.9 |
| Diastolic blood pressure | 6.8 |
| Heart rate | 4.1 |
| Systolic blood pressure | 3.9 |
| Alcohol abuse | 3.9 |
|
| |
| Haemoglobin | 15.7 |
| Diastolic blood pressure | 13.9 |
| haematocrit | 9.5 |
| APTT | 9.0 |
| Creatinine | 8.2 |
| Fresh blood on PR | 7.1 |
| Prothrombin time | 6.7 |
| Heart rate | 5.0 |
| Past medical history of colorectal polyp | 3.4 |
| Use of NSAIDs or anticoagulants | 3.4 |
|
| |
| Creatinine | 19.1 |
| Haemoglobin | 18.8 |
| Age | 17.9 |
| Diabetes | 13.2 |
| APTT | 11.5 |
| Diastolic blood pressure | 6.8 |
| Heart Rate | 4.6 |
| Urea | 4.4 |
| Alcoholism | 2.4 |
| Total number of co-morbidities | 1.3 |