Literature DB >> 26142614

Predicting aquatic toxicities of chemical pesticides in multiple test species using nonlinear QSTR modeling approaches.

Nikita Basant1, Shikha Gupta2, Kunwar P Singh3.   

Abstract

In this study, we established nonlinear quantitative-structure toxicity relationship (QSTR) models for predicting the toxicities of chemical pesticides in multiple aquatic test species following the OECD (Organization for Economic Cooperation and Development) guidelines. The decision tree forest (DTF) and decision tree boost (DTB) based QSTR models were constructed using a pesticides toxicity dataset in Selenastrum capricornutum and a set of six descriptors. Other six toxicity data sets were used for external validation of the constructed QSTRs. Global QSTR models were also constructed using the combined dataset of all the seven species. The diversity in chemical structures and nonlinearity in the data were evaluated. Model validation was performed deriving several statistical coefficients for the test data and the prediction and generalization abilities of the QSTRs were evaluated. Both the QSTR models identified WPSA1 (weighted charged partial positive surface area) as the most influential descriptor. The DTF and DTB QSTRs performed relatively better than the single decision tree (SDT) and support vector machines (SVM) models used as a benchmark here and yielded R(2) of 0.886 and 0.964 between the measured and predicted toxicity values in the complete dataset (S. capricornutum). The QSTR models applied to six other aquatic species toxicity data yielded R(2) of >0.92 (DTF) and >0.97 (DTB), respectively. The prediction accuracies of the global models were comparable with those of the S. capricornutum models. The results suggest for the appropriateness of the developed QSTR models to reliably predict the aquatic toxicity of chemicals and can be used for regulatory purpose.
Copyright © 2015 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Algae; Aquatic toxicity; Chemical pesticides; Global QSTRs; Multi-species QSTRs; Structural diversity

Mesh:

Substances:

Year:  2015        PMID: 26142614     DOI: 10.1016/j.chemosphere.2015.06.063

Source DB:  PubMed          Journal:  Chemosphere        ISSN: 0045-6535            Impact factor:   7.086


  7 in total

1.  QSAR modeling for predicting mutagenic toxicity of diverse chemicals for regulatory purposes.

Authors:  Nikita Basant; Shikha Gupta
Journal:  Environ Sci Pollut Res Int       Date:  2017-04-24       Impact factor: 4.223

2.  In silico prediction of pesticide aquatic toxicity with chemical category approaches.

Authors:  Fuxing Li; Defang Fan; Hao Wang; Hongbin Yang; Weihua Li; Yun Tang; Guixia Liu
Journal:  Toxicol Res (Camb)       Date:  2017-07-31       Impact factor: 3.524

3.  In silico prediction of the developmental toxicity of diverse organic chemicals in rodents for regulatory purposes.

Authors:  Nikita Basant; Shikha Gupta; Kunwar P Singh
Journal:  Toxicol Res (Camb)       Date:  2016-02-29       Impact factor: 3.524

4.  Modeling the toxicity of chemical pesticides in multiple test species using local and global QSTR approaches.

Authors:  Nikita Basant; Shikha Gupta; Kunwar P Singh
Journal:  Toxicol Res (Camb)       Date:  2015-12-10       Impact factor: 3.524

5.  Design of potential anti-tumor PARP-1 inhibitors by QSAR and molecular modeling studies.

Authors:  Zeinab Abbasi-Radmoghaddam; Siavash Riahi; Sajjad Gharaghani; Mohammad Mohammadi-Khanaposhtanai
Journal:  Mol Divers       Date:  2020-03-05       Impact factor: 2.943

6.  Modeling the reactivities of hydroxyl radical and ozone towards atmospheric organic chemicals using quantitative structure-reactivity relationship approaches.

Authors:  Shikha Gupta; Nikita Basant; Dinesh Mohan; Kunwar P Singh
Journal:  Environ Sci Pollut Res Int       Date:  2016-04-04       Impact factor: 4.223

7.  QSAR modeling for predicting reproductive toxicity of chemicals in rats for regulatory purposes.

Authors:  Nikita Basant; Shikha Gupta; Kunwar P Singh
Journal:  Toxicol Res (Camb)       Date:  2016-04-26       Impact factor: 3.524

  7 in total

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