Literature DB >> 26121369

Metabolism of Multiple Aromatic Compounds in Corn Stover Hydrolysate by Rhodopseudomonas palustris.

Samantha Austin1, Wayne S Kontur1, Arne Ulbrich1, J Zachary Oshlag1, Weiping Zhang1, Alan Higbee1, Yaoping Zhang1, Joshua J Coon1, David B Hodge1, Timothy J Donohue1, Daniel R Noguera1.   

Abstract

Lignocellulosic biomass hydrolysates hold great potential as a feedstock for microbial biofuel production, due to their high concentration of fermentable sugars. Present at lower concentrations are a suite of aromatic compounds that can inhibit fermentation by biofuel-producing microbes. We have developed a microbial-mediated strategy for removing these aromatic compounds, using the purple nonsulfur bacterium Rhodopseudomonas palustris. When grown photoheterotrophically in an anaerobic environment, R. palustris removes most of the aromatics from ammonia fiber expansion (AFEX) treated corn stover hydrolysate (ACSH), while leaving the sugars mostly intact. We show that R. palustris can metabolize a host of aromatic substrates in ACSH that have either been previously described as unable to support growth, such as methoxylated aromatics, and those that have not yet been tested, such as aromatic amides. Removing the aromatics from ACSH with R. palustris, allowed growth of a second microbe that could not grow in the untreated ACSH. By using defined mutants, we show that most of these aromatic compounds are metabolized by the benzoyl-CoA pathway. We also show that loss of enzymes in the benzoyl-CoA pathway prevents total degradation of the aromatics in the hydrolysate, and instead allows for biological transformation of this suite of aromatics into selected aromatic compounds potentially recoverable as an additional bioproduct.

Entities:  

Mesh:

Substances:

Year:  2015        PMID: 26121369      PMCID: PMC5031247          DOI: 10.1021/acs.est.5b02062

Source DB:  PubMed          Journal:  Environ Sci Technol        ISSN: 0013-936X            Impact factor:   9.028


  33 in total

1.  Identification of a p-coumarate degradation regulon in Rhodopseudomonas palustris by Xpression, an integrated tool for prokaryotic RNA-seq data processing.

Authors:  Somsak Phattarasukol; Matthew C Radey; Colin R Lappala; Yasuhiro Oda; Hidetada Hirakawa; Mitchell J Brittnacher; Caroline S Harwood
Journal:  Appl Environ Microbiol       Date:  2012-07-13       Impact factor: 4.792

2.  Complex physiology and compound stress responses during fermentation of alkali-pretreated corn stover hydrolysate by an Escherichia coli ethanologen.

Authors:  Michael S Schwalbach; David H Keating; Mary Tremaine; Wesley D Marner; Yaoping Zhang; William Bothfeld; Alan Higbee; Jeffrey A Grass; Cameron Cotten; Jennifer L Reed; Leonardo da Costa Sousa; Mingjie Jin; Venkatesh Balan; James Ellinger; Bruce Dale; Patricia J Kiley; Robert Landick
Journal:  Appl Environ Microbiol       Date:  2012-03-02       Impact factor: 4.792

Review 3.  Biotechnological strategies to overcome inhibitors in lignocellulose hydrolysates for ethanol production: review.

Authors:  W Parawira; M Tekere
Journal:  Crit Rev Biotechnol       Date:  2010-05-31       Impact factor: 8.429

4.  Anaerobic p-coumarate degradation by Rhodopseudomonas palustris and identification of CouR, a MarR repressor protein that binds p-coumaroyl coenzyme A.

Authors:  Hidetada Hirakawa; Amy L Schaefer; E Peter Greenberg; Caroline S Harwood
Journal:  J Bacteriol       Date:  2012-02-10       Impact factor: 3.490

5.  Inhibition of Escherichia coli growth by acetic acid: a problem with methionine biosynthesis and homocysteine toxicity.

Authors:  Andrew J Roe; Conor O'Byrne; Debra McLaggan; Ian R Booth
Journal:  Microbiology       Date:  2002-07       Impact factor: 2.777

6.  Revised sequence and annotation of the Rhodobacter sphaeroides 2.4.1 genome.

Authors:  Wayne S Kontur; Wendy S Schackwitz; Natalia Ivanova; Joel Martin; Kurt Labutti; Shweta Deshpande; Hope N Tice; Christa Pennacchio; Erica Sodergren; George M Weinstock; Daniel R Noguera; Timothy J Donohue
Journal:  J Bacteriol       Date:  2012-12       Impact factor: 3.490

7.  Mode of antimicrobial action of vanillin against Escherichia coli, Lactobacillus plantarum and Listeria innocua.

Authors:  D J Fitzgerald; M Stratford; M J Gasson; J Ueckert; A Bos; A Narbad
Journal:  J Appl Microbiol       Date:  2004       Impact factor: 3.772

8.  Effects of acetic acid on the kinetics of xylose fermentation by an engineered, xylose-isomerase-based Saccharomyces cerevisiae strain.

Authors:  Eleonora Bellissimi; Johannes P van Dijken; Jack T Pronk; Antonius J A van Maris
Journal:  FEMS Yeast Res       Date:  2009-05       Impact factor: 2.796

9.  Cellulosic ethanol production from AFEX-treated corn stover using Saccharomyces cerevisiae 424A(LNH-ST).

Authors:  Ming W Lau; Bruce E Dale
Journal:  Proc Natl Acad Sci U S A       Date:  2009-01-22       Impact factor: 11.205

10.  Death by a thousand cuts: the challenges and diverse landscape of lignocellulosic hydrolysate inhibitors.

Authors:  Jeff S Piotrowski; Yaoping Zhang; Donna M Bates; David H Keating; Trey K Sato; Irene M Ong; Robert Landick
Journal:  Front Microbiol       Date:  2014-03-14       Impact factor: 5.640

View more
  11 in total

1.  Phototrophic Lactate Utilization by Rhodopseudomonas palustris Is Stimulated by Coutilization with Additional Substrates.

Authors:  Alekhya Govindaraju; James B McKinlay; Breah LaSarre
Journal:  Appl Environ Microbiol       Date:  2019-05-16       Impact factor: 4.792

2.  Mutations That Alter the Bacterial Cell Envelope Increase Lipid Production.

Authors:  Kimberly C Lemmer; Weiping Zhang; Samantha J Langer; Alice C Dohnalkova; Dehong Hu; Rachelle A Lemke; Jeff S Piotrowski; Galya Orr; Daniel R Noguera; Timothy J Donohue
Journal:  MBio       Date:  2017-05-23       Impact factor: 7.867

3.  Modeling the Interplay between Photosynthesis, CO2 Fixation, and the Quinone Pool in a Purple Non-Sulfur Bacterium.

Authors:  Adil Alsiyabi; Cheryl M Immethun; Rajib Saha
Journal:  Sci Rep       Date:  2019-09-02       Impact factor: 4.379

4.  Anaerobic Degradation of Syringic Acid by an Adapted Strain of Rhodopseudomonas palustris.

Authors:  J Zachary Oshlag; Yanjun Ma; Kaitlin Morse; Brian T Burger; Rachelle A Lemke; Steven D Karlen; Kevin S Myers; Timothy J Donohue; Daniel R Noguera
Journal:  Appl Environ Microbiol       Date:  2020-01-21       Impact factor: 4.792

5.  Redundancy in aromatic O-demethylation and ring opening reactions in Novosphingobium aromaticivorans and their impact in the metabolism of plant derived phenolics.

Authors:  Jose M Perez; Wayne S Kontur; Carson Gehl; Derek M Gille; Yanjun Ma; Alyssa V Niles; German Umana; Timothy J Donohue; Daniel R Noguera
Journal:  Appl Environ Microbiol       Date:  2021-02-12       Impact factor: 4.792

6.  Kinetic modeling of anaerobic degradation of plant-derived aromatic mixtures by Rhodopseudomonas palustris.

Authors:  Yanjun Ma; Timothy J Donohue; Daniel R Noguera
Journal:  Biodegradation       Date:  2021-03-06       Impact factor: 3.909

7.  Synthetic Biology Tool Development Advances Predictable Gene Expression in the Metabolically Versatile Soil Bacterium Rhodopseudomonas palustris.

Authors:  Cheryl M Immethun; Mark Kathol; Taity Changa; Rajib Saha
Journal:  Front Bioeng Biotechnol       Date:  2022-03-16

8.  Development of a low-cost culture medium for the rapid production of plant growth-promoting Rhodopseudomonas palustris strain PS3.

Authors:  Kai-Jiun Lo; Sook-Kuan Lee; Chi-Te Liu
Journal:  PLoS One       Date:  2020-07-30       Impact factor: 3.240

9.  Whole-genome sequencing and comparative analysis of two plant-associated strains of Rhodopseudomonas palustris (PS3 and YSC3).

Authors:  Kai-Jiun Lo; Shih-Shun Lin; Chia-Wei Lu; Chih-Horng Kuo; Chi-Te Liu
Journal:  Sci Rep       Date:  2018-08-24       Impact factor: 4.379

10.  Increasing the economic value of lignocellulosic stillage through medium-chain fatty acid production.

Authors:  Matthew J Scarborough; Griffin Lynch; Mitch Dickson; Mick McGee; Timothy J Donohue; Daniel R Noguera
Journal:  Biotechnol Biofuels       Date:  2018-07-19       Impact factor: 6.040

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.