Literature DB >> 26113725

RNA BIOCHEMISTRY. Factor-dependent processivity in human eIF4A DEAD-box helicase.

Cuauhtémoc García-García1, Kirsten L Frieda2, Kateryna Feoktistova3, Christopher S Fraser3, Steven M Block4.   

Abstract

During eukaryotic translation initiation, the small ribosomal subunit, assisted by initiation factors, locates the messenger RNA start codon by scanning from the 5' cap. This process is powered by the eukaryotic initiation factor 4A (eIF4A), a DEAD-box helicase. eIF4A has been thought to unwind structures formed in the untranslated 5' region via a nonprocessive mechanism. Using a single-molecule assay, we found that eIF4A functions instead as an adenosine triphosphate-dependent processive helicase when complexed with two accessory proteins, eIF4G and eIF4B. Translocation occurred in discrete steps of 11 ± 2 base pairs, irrespective of the accessory factor combination. Our findings support a memory-less stepwise mechanism for translation initiation and suggest that similar factor-dependent processivity may be shared by other members of the DEAD-box helicase family.
Copyright © 2015, American Association for the Advancement of Science.

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Year:  2015        PMID: 26113725      PMCID: PMC4605566          DOI: 10.1126/science.aaa5089

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  30 in total

1.  Crystal structure of yeast initiation factor 4A, a DEAD-box RNA helicase.

Authors:  J M Caruthers; E R Johnson; D B McKay
Journal:  Proc Natl Acad Sci U S A       Date:  2000-11-21       Impact factor: 11.205

Review 2.  DEAD-box proteins: the driving forces behind RNA metabolism.

Authors:  Sanda Rocak; Patrick Linder
Journal:  Nat Rev Mol Cell Biol       Date:  2004-03       Impact factor: 94.444

3.  Bidirectional RNA helicase activity of eucaryotic translation initiation factors 4A and 4F.

Authors:  F Rozen; I Edery; K Meerovitch; T E Dever; W C Merrick; N Sonenberg
Journal:  Mol Cell Biol       Date:  1990-03       Impact factor: 4.272

4.  Kinesin hydrolyses one ATP per 8-nm step.

Authors:  M J Schnitzer; S M Block
Journal:  Nature       Date:  1997-07-24       Impact factor: 49.962

5.  The DEAD box protein eIF4A. 2. A cycle of nucleotide and RNA-dependent conformational changes.

Authors:  J R Lorsch; D Herschlag
Journal:  Biochemistry       Date:  1998-02-24       Impact factor: 3.162

6.  Biochemical evidence supporting a mechanism for cap-independent and internal initiation of eukaryotic mRNA.

Authors:  R D Abramson; T E Dever; W C Merrick
Journal:  J Biol Chem       Date:  1988-05-05       Impact factor: 5.157

7.  Biochemical and kinetic characterization of the RNA helicase activity of eukaryotic initiation factor 4A.

Authors:  G W Rogers; N J Richter; W C Merrick
Journal:  J Biol Chem       Date:  1999-04-30       Impact factor: 5.157

8.  Translation driven by an eIF4G core domain in vivo.

Authors:  E De Gregorio; T Preiss; M W Hentze
Journal:  EMBO J       Date:  1999-09-01       Impact factor: 11.598

9.  eIF4B and eIF4G jointly stimulate eIF4A ATPase and unwinding activities by modulation of the eIF4A conformational cycle.

Authors:  Alexandra Zoi Andreou; Dagmar Klostermeier
Journal:  J Mol Biol       Date:  2013-09-27       Impact factor: 5.469

Review 10.  The scanning model for translation: an update.

Authors:  M Kozak
Journal:  J Cell Biol       Date:  1989-02       Impact factor: 10.539

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  40 in total

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Journal:  Cold Spring Harb Perspect Biol       Date:  2019-02-01       Impact factor: 10.005

Review 2.  A mechanistic study of helicases with magnetic traps.

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Journal:  Protein Sci       Date:  2017-06-13       Impact factor: 6.725

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Authors:  Neelam Dabas Sen; Fujun Zhou; Michael S Harris; Nicholas T Ingolia; Alan G Hinnebusch
Journal:  Proc Natl Acad Sci U S A       Date:  2016-09-06       Impact factor: 11.205

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Authors:  Alexandra Zoi Andreou; Ulf Harms; Dagmar Klostermeier
Journal:  RNA Biol       Date:  2016-11-18       Impact factor: 4.652

Review 5.  Methods to study the coupling between replicative helicase and leading-strand DNA polymerase at the replication fork.

Authors:  Divya Nandakumar; Smita S Patel
Journal:  Methods       Date:  2016-05-09       Impact factor: 3.608

Review 6.  eIF4F: a retrospective.

Authors:  William C Merrick
Journal:  J Biol Chem       Date:  2015-08-31       Impact factor: 5.157

Review 7.  Hippuristanol - A potent steroid inhibitor of eukaryotic initiation factor 4A.

Authors:  Regina Cencic; Jerry Pelletier
Journal:  Translation (Austin)       Date:  2016-01-04

Review 8.  Distinct RNA-unwinding mechanisms of DEAD-box and DEAH-box RNA helicase proteins in remodeling structured RNAs and RNPs.

Authors:  Benjamin Gilman; Pilar Tijerina; Rick Russell
Journal:  Biochem Soc Trans       Date:  2017-11-17       Impact factor: 5.407

Review 9.  Translational control of stem cell function.

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Journal:  Nat Rev Mol Cell Biol       Date:  2021-07-16       Impact factor: 94.444

Review 10.  Mechanisms of repeat-associated non-AUG translation in neurological microsatellite expansion disorders.

Authors:  Lydia M Castelli; Wan-Ping Huang; Ya-Hui Lin; Kung-Yao Chang; Guillaume M Hautbergue
Journal:  Biochem Soc Trans       Date:  2021-04-30       Impact factor: 5.407

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