Literature DB >> 26089515

SIGNAL TRANSDUCTION. Structural basis for nucleotide exchange in heterotrimeric G proteins.

Ron O Dror1, Thomas J Mildorf2, Daniel Hilger3, Aashish Manglik3, David W Borhani2, Daniel H Arlow2, Ansgar Philippsen2, Nicolas Villanueva4, Zhongyu Yang5, Michael T Lerch5, Wayne L Hubbell5, Brian K Kobilka3, Roger K Sunahara4, David E Shaw6.   

Abstract

G protein-coupled receptors (GPCRs) relay diverse extracellular signals into cells by catalyzing nucleotide release from heterotrimeric G proteins, but the mechanism underlying this quintessential molecular signaling event has remained unclear. Here we use atomic-level simulations to elucidate the nucleotide-release mechanism. We find that the G protein α subunit Ras and helical domains-previously observed to separate widely upon receptor binding to expose the nucleotide-binding site-separate spontaneously and frequently even in the absence of a receptor. Domain separation is necessary but not sufficient for rapid nucleotide release. Rather, receptors catalyze nucleotide release by favoring an internal structural rearrangement of the Ras domain that weakens its nucleotide affinity. We use double electron-electron resonance spectroscopy and protein engineering to confirm predictions of our computationally determined mechanism.
Copyright © 2015, American Association for the Advancement of Science.

Entities:  

Mesh:

Substances:

Year:  2015        PMID: 26089515      PMCID: PMC4968074          DOI: 10.1126/science.aaa5264

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  28 in total

1.  The function of interdomain interactions in controlling nucleotide exchange rates in transducin.

Authors:  E P Marin; A G Krishna; V Archambault; E Simuni; W Y Fu; T P Sakmar
Journal:  J Biol Chem       Date:  2001-04-04       Impact factor: 5.157

2.  Rapid activation of transducin by mutations distant from the nucleotide-binding site: evidence for a mechanistic model of receptor-catalyzed nucleotide exchange by G proteins.

Authors:  E P Marin; A G Krishna; T P Sakmar
Journal:  J Biol Chem       Date:  2001-05-16       Impact factor: 5.157

3.  Differences in intradomain and interdomain motion confer distinct activation properties to structurally similar Gα proteins.

Authors:  Janice C Jones; Alan M Jones; Brenda R S Temple; Henrik G Dohlman
Journal:  Proc Natl Acad Sci U S A       Date:  2012-04-23       Impact factor: 11.205

4.  Conformational changes in the G protein Gs induced by the β2 adrenergic receptor.

Authors:  Ka Young Chung; Søren G F Rasmussen; Tong Liu; Sheng Li; Brian T DeVree; Pil Seok Chae; Diane Calinski; Brian K Kobilka; Virgil L Woods; Roger K Sunahara
Journal:  Nature       Date:  2011-09-28       Impact factor: 49.962

Review 5.  Heterotrimeric G protein activation by G-protein-coupled receptors.

Authors:  William M Oldham; Heidi E Hamm
Journal:  Nat Rev Mol Cell Biol       Date:  2008-01       Impact factor: 94.444

6.  G protein inactive and active forms investigated by simulation methods.

Authors:  Kamil Khafizov; Gianluca Lattanzi; Paolo Carloni
Journal:  Proteins       Date:  2009-06

7.  Receptor and betagamma binding sites in the alpha subunit of the retinal G protein transducin.

Authors:  R Onrust; P Herzmark; P Chi; P D Garcia; O Lichtarge; C Kingsley; H R Bourne
Journal:  Science       Date:  1997-01-17       Impact factor: 47.728

8.  The 2.0 A crystal structure of a heterotrimeric G protein.

Authors:  D G Lambright; J Sondek; A Bohm; N P Skiba; H E Hamm; P B Sigler
Journal:  Nature       Date:  1996-01-25       Impact factor: 49.962

Review 9.  The structure and function of G-protein-coupled receptors.

Authors:  Daniel M Rosenbaum; Søren G F Rasmussen; Brian K Kobilka
Journal:  Nature       Date:  2009-05-21       Impact factor: 49.962

10.  Crystal structure of the β2 adrenergic receptor-Gs protein complex.

Authors:  Søren G F Rasmussen; Brian T DeVree; Yaozhong Zou; Andrew C Kruse; Ka Young Chung; Tong Sun Kobilka; Foon Sun Thian; Pil Seok Chae; Els Pardon; Diane Calinski; Jesper M Mathiesen; Syed T A Shah; Joseph A Lyons; Martin Caffrey; Samuel H Gellman; Jan Steyaert; Georgios Skiniotis; William I Weis; Roger K Sunahara; Brian K Kobilka
Journal:  Nature       Date:  2011-07-19       Impact factor: 49.962

View more
  110 in total

1.  Dynamic Coupling and Allosteric Networks in the α Subunit of Heterotrimeric G Proteins.

Authors:  Xin-Qiu Yao; Rabia U Malik; Nicholas W Griggs; Lars Skjærven; John R Traynor; Sivaraj Sivaramakrishnan; Barry J Grant
Journal:  J Biol Chem       Date:  2015-12-24       Impact factor: 5.157

2.  Optimization of a Nucleic Acids united-RESidue 2-Point model (NARES-2P) with a maximum-likelihood approach.

Authors:  Yi He; Adam Liwo; Harold A Scheraga
Journal:  J Chem Phys       Date:  2015-12-28       Impact factor: 3.488

Review 3.  The ins and outs of adrenergic signaling.

Authors:  Martin J Lohse
Journal:  J Mol Med (Berl)       Date:  2015-07-23       Impact factor: 4.599

4.  Structural basis for GPCR-independent activation of heterotrimeric Gi proteins.

Authors:  Nicholas A Kalogriopoulos; Steven D Rees; Tony Ngo; Noah J Kopcho; Andrey V Ilatovskiy; Nina Sun; Elizabeth A Komives; Geoffrey Chang; Pradipta Ghosh; Irina Kufareva
Journal:  Proc Natl Acad Sci U S A       Date:  2019-07-30       Impact factor: 11.205

5.  GNAS: A New Nephrogenic Cause of Inappropriate Antidiuresis.

Authors:  Daniel G Bichet; Sébastien Granier; Detlef Bockenhauer
Journal:  J Am Soc Nephrol       Date:  2019-04-08       Impact factor: 10.121

6.  Coding GPCR-G protein specificity.

Authors:  Sebastian Gb Furness; Patrick M Sexton
Journal:  Cell Res       Date:  2017-07-11       Impact factor: 25.617

Review 7.  The GAPs, GEFs, GDIs and…now, GEMs: New kids on the heterotrimeric G protein signaling block.

Authors:  Pradipta Ghosh; Padmini Rangamani; Irina Kufareva
Journal:  Cell Cycle       Date:  2017-03-13       Impact factor: 4.534

8.  Molecular dynamics simulations of nucleotide release from the circadian clock protein KaiC reveal atomic-resolution functional insights.

Authors:  Lu Hong; Bodhi P Vani; Erik H Thiede; Michael J Rust; Aaron R Dinner
Journal:  Proc Natl Acad Sci U S A       Date:  2018-11-15       Impact factor: 11.205

9.  Molecular mechanism of GPCR-mediated arrestin activation.

Authors:  Naomi R Latorraca; Jason K Wang; Brian Bauer; Raphael J L Townshend; Scott A Hollingsworth; Julia E Olivieri; H Eric Xu; Martha E Sommer; Ron O Dror
Journal:  Nature       Date:  2018-05-02       Impact factor: 49.962

10.  GIV/Girdin activates Gαi and inhibits Gαs via the same motif.

Authors:  Vijay Gupta; Deepali Bhandari; Anthony Leyme; Nicolas Aznar; Krishna K Midde; I-Chung Lo; Jason Ear; Ingrid Niesman; Inmaculada López-Sánchez; Juan Bautista Blanco-Canosa; Mark von Zastrow; Mikel Garcia-Marcos; Marilyn G Farquhar; Pradipta Ghosh
Journal:  Proc Natl Acad Sci U S A       Date:  2016-09-12       Impact factor: 11.205

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.