Literature DB >> 26703464

Dynamic Coupling and Allosteric Networks in the α Subunit of Heterotrimeric G Proteins.

Xin-Qiu Yao1, Rabia U Malik2, Nicholas W Griggs3, Lars Skjærven4, John R Traynor3, Sivaraj Sivaramakrishnan5, Barry J Grant6.   

Abstract

G protein α subunits cycle between active and inactive conformations to regulate a multitude of intracellular signaling cascades. Important structural transitions occurring during this cycle have been characterized from extensive crystallographic studies. However, the link between observed conformations and the allosteric regulation of binding events at distal sites critical for signaling through G proteins remain unclear. Here we describe molecular dynamics simulations, bioinformatics analysis, and experimental mutagenesis that identifies residues involved in mediating the allosteric coupling of receptor, nucleotide, and helical domain interfaces of Gαi. Most notably, we predict and characterize novel allosteric decoupling mutants, which display enhanced helical domain opening, increased rates of nucleotide exchange, and constitutive activity in the absence of receptor activation. Collectively, our results provide a framework for explaining how binding events and mutations can alter internal dynamic couplings critical for G protein function.
© 2016 by The American Society for Biochemistry and Molecular Biology, Inc.

Keywords:  G protein; allosteric regulation; bioinformatics; molecular dynamics; mutagenesis

Mesh:

Substances:

Year:  2015        PMID: 26703464      PMCID: PMC4813496          DOI: 10.1074/jbc.M115.702605

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  52 in total

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