Literature DB >> 31363053

Structural basis for GPCR-independent activation of heterotrimeric Gi proteins.

Nicholas A Kalogriopoulos1, Steven D Rees2, Tony Ngo2, Noah J Kopcho2,3, Andrey V Ilatovskiy2, Nina Sun1, Elizabeth A Komives3, Geoffrey Chang4, Pradipta Ghosh5,6,7, Irina Kufareva4.   

Abstract

Heterotrimeric G proteins are key molecular switches that control cell behavior. The canonical activation of G proteins by agonist-occupied G protein-coupled receptors (GPCRs) has recently been elucidated from the structural perspective. In contrast, the structural basis for GPCR-independent G protein activation by a novel family of guanine-nucleotide exchange modulators (GEMs) remains unknown. Here, we present a 2.0-Å crystal structure of Gαi in complex with the GEM motif of GIV/Girdin. Nucleotide exchange assays, molecular dynamics simulations, and hydrogen-deuterium exchange experiments demonstrate that GEM binding to the conformational switch II causes structural changes that allosterically propagate to the hydrophobic core of the Gαi GTPase domain. Rearrangement of the hydrophobic core appears to be a common mechanism by which GPCRs and GEMs activate G proteins, although with different efficiency. Atomic-level insights presented here will aid structure-based efforts to selectively target the noncanonical G protein activation.

Entities:  

Keywords:  GIV/Girdin; X-ray crystallography; guanine-nucleotide exchange modulator (GEM); hydrogen–deuterium exchange; molecular dynamics

Year:  2019        PMID: 31363053      PMCID: PMC6697900          DOI: 10.1073/pnas.1906658116

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  57 in total

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3.  Structure of Galpha(i1) bound to a GDP-selective peptide provides insight into guanine nucleotide exchange.

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Journal:  Structure       Date:  2005-07       Impact factor: 5.006

4.  GIV is a nonreceptor GEF for G alpha i with a unique motif that regulates Akt signaling.

Authors:  Mikel Garcia-Marcos; Pradipta Ghosh; Marilyn G Farquhar
Journal:  Proc Natl Acad Sci U S A       Date:  2009-02-11       Impact factor: 11.205

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Authors:  Thomas E Wales; John R Engen
Journal:  Mass Spectrom Rev       Date:  2006 Jan-Feb       Impact factor: 10.946

6.  Amide H/2H exchange reveals communication between the cAMP and catalytic subunit-binding sites in the R(I)alpha subunit of protein kinase A.

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7.  Structural studies on the Ca2+-binding domain of human nucleobindin (calnuc).

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Review 8.  Scaling and assessment of data quality.

Authors:  Philip Evans
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-12-14

Review 9.  The GAPs, GEFs, and GDIs of heterotrimeric G-protein alpha subunits.

Authors:  David P Siderovski; Francis S Willard
Journal:  Int J Biol Sci       Date:  2005-04-01       Impact factor: 6.580

10.  Phaser crystallographic software.

Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
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  12 in total

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Journal:  Wiley Interdiscip Rev Syst Biol Med       Date:  2020-04-23

2.  DAPLE protein inhibits nucleotide exchange on Gαs and Gαq via the same motif that activates Gαi.

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4.  Ric-8A, a GEF, and a Chaperone for G Protein α-Subunits: Evidence for the Two-Faced Interface.

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6.  Large-scale conformational rearrangement of the α5-helix of Gα subunits in complex with the guanine nucleotide exchange factor Ric8A.

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7.  Building unconventional G protein-coupled receptors, one block at a time.

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Review 8.  Strategies towards Targeting Gαi/s Proteins: Scanning of Protein-Protein Interaction Sites To Overcome Inaccessibility.

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10.  A long isoform of GIV/Girdin contains a PDZ-binding module that regulates localization and G-protein binding.

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Journal:  J Biol Chem       Date:  2021-03-03       Impact factor: 5.157

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