Literature DB >> 26055255

A genetically amenable platensimycin- and platencin-overproducer as a platform for biosynthetic explorations: a showcase of PtmO4, a long-chain acyl-CoA dehydrogenase.

Jeffrey D Rudolf1, Liao-Bin Dong, Tingting Huang, Ben Shen.   

Abstract

Platensimycin (PTM) and platencin (PTN) are members of a new class of promising drug leads that target bacterial and mammalian fatty acid synthases. We previously cloned and sequenced the PTM and PTN gene clusters, discovered six additional PTM-PTN dual producing strains, and demonstrated the dramatic overproduction of PTM and PTN by inactivating the pathway-specific regulators ptmR1 or ptnR1 in five different strains. Our ability to utilize these PTM-PTN dual overproducing strains was limited by their lack of genetic amenability. Here we report the construction of Streptomyces platensis SB12029, a genetically amenable, in-frame ΔptmR1 dual PTM-PTN overproducing strain. To highlight the potential of this strain for future PTM and PTN biosynthetic studies, we created the ΔptmR1 ΔptmO4 double mutant S. platensis SB12030. Fourteen PTM and PTN congeners, ten of which were new, were isolated from SB12030, shedding new insights into PTM and PTN biosynthesis. PtmO4, a long-chain acyl-CoA dehydrogenase, is strongly implicated to catalyze β-oxidation of the diterpenoid intermediates into the PTM and PTN scaffolds. SB12029 sets the stage for future biosynthetic and bioengineering studies of the PTM and PTN family of natural products.

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Year:  2015        PMID: 26055255      PMCID: PMC4573825          DOI: 10.1039/c5mb00303b

Source DB:  PubMed          Journal:  Mol Biosyst        ISSN: 1742-2051


  27 in total

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Authors:  Rubén Bottini; Fabricio Cassán; Patricia Piccoli
Journal:  Appl Microbiol Biotechnol       Date:  2004-07-28       Impact factor: 4.813

2.  Isolation, enzyme-bound structure and antibacterial activity of platencin A1 from Streptomyces platensis.

Authors:  Sheo B Singh; John G Ondeyka; Kithsiri B Herath; Chaowei Zhang; Hiranthi Jayasuriya; Deborah L Zink; Gopalakrishnan Parthasarathy; Joseph W Becker; Jun Wang; Stephen M Soisson
Journal:  Bioorg Med Chem Lett       Date:  2009-06-17       Impact factor: 2.823

Review 3.  beta-oxidation of fatty acids in mitochondria, peroxisomes, and bacteria: a century of continued progress.

Authors:  W H Kunau; V Dommes; H Schulz
Journal:  Prog Lipid Res       Date:  1995       Impact factor: 16.195

4.  Isolation, structure, and absolute stereochemistry of platensimycin, a broad spectrum antibiotic discovered using an antisense differential sensitivity strategy.

Authors:  Sheo B Singh; Hiranthi Jayasuriya; John G Ondeyka; Kithsiri B Herath; Chaowei Zhang; Deborah L Zink; Nancy N Tsou; Richard G Ball; Angela Basilio; Olga Genilloud; Maria Teresa Diez; Francisca Vicente; Fernando Pelaez; Katherine Young; Jun Wang
Journal:  J Am Chem Soc       Date:  2006-09-13       Impact factor: 15.419

5.  Antidiabetic and antisteatotic effects of the selective fatty acid synthase (FAS) inhibitor platensimycin in mouse models of diabetes.

Authors:  Margaret Wu; Sheo B Singh; Jun Wang; Christine C Chung; Gino Salituro; Bindhu V Karanam; Sang Ho Lee; Maryann Powles; Kenneth P Ellsworth; Michael E Lassman; Corey Miller; Robert W Myers; Michael R Tota; Bei B Zhang; Cai Li
Journal:  Proc Natl Acad Sci U S A       Date:  2011-03-09       Impact factor: 11.205

6.  Platensimycin is a selective FabF inhibitor with potent antibiotic properties.

Authors:  Jun Wang; Stephen M Soisson; Katherine Young; Wesley Shoop; Srinivas Kodali; Andrew Galgoci; Ronald Painter; Gopalakrishnan Parthasarathy; Yui S Tang; Richard Cummings; Sookhee Ha; Karen Dorso; Mary Motyl; Hiranthi Jayasuriya; John Ondeyka; Kithsiri Herath; Chaowei Zhang; Lorraine Hernandez; John Allocco; Angela Basilio; José R Tormo; Olga Genilloud; Francisca Vicente; Fernando Pelaez; Lawrence Colwell; Sang Ho Lee; Bruce Michael; Thomas Felcetto; Charles Gill; Lynn L Silver; Jeffery D Hermes; Ken Bartizal; John Barrett; Dennis Schmatz; Joseph W Becker; Doris Cully; Sheo B Singh
Journal:  Nature       Date:  2006-05-18       Impact factor: 49.962

7.  Analysis of genes involved in 6-deoxyhexose biosynthesis and transfer in Saccharopolyspora erythraea.

Authors:  M Doumith; P Weingarten; U F Wehmeier; K Salah-Bey; B Benhamou; C Capdevila; J M Michel; W Piepersberg; M C Raynal
Journal:  Mol Gen Genet       Date:  2000-11

8.  Discovery of platencin, a dual FabF and FabH inhibitor with in vivo antibiotic properties.

Authors:  Jun Wang; Srinivas Kodali; Sang Ho Lee; Andrew Galgoci; Ronald Painter; Karen Dorso; Fred Racine; Mary Motyl; Lorraine Hernandez; Elizabeth Tinney; Steven L Colletti; Kithsiri Herath; Richard Cummings; Oscar Salazar; Ignacio González; Angela Basilio; Francisca Vicente; Olga Genilloud; Fernando Pelaez; Hiranthi Jayasuriya; Katherine Young; Doris F Cully; Sheo B Singh
Journal:  Proc Natl Acad Sci U S A       Date:  2007-04-24       Impact factor: 11.205

9.  Design, synthesis, and biological evaluation of platensimycin analogues with varying degrees of molecular complexity.

Authors:  K C Nicolaou; Antonia F Stepan; Troy Lister; Ang Li; Ana Montero; G Scott Tria; Craig I Turner; Yefeng Tang; Jianhua Wang; Ross M Denton; David J Edmonds
Journal:  J Am Chem Soc       Date:  2008-09-05       Impact factor: 15.419

10.  Engineered Streptomyces platensis strains that overproduce antibiotics platensimycin and platencin.

Authors:  Michael J Smanski; Ryan M Peterson; Scott R Rajski; Ben Shen
Journal:  Antimicrob Agents Chemother       Date:  2009-01-21       Impact factor: 5.191

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  21 in total

1.  Genome neighborhood network reveals insights into enediyne biosynthesis and facilitates prediction and prioritization for discovery.

Authors:  Jeffrey D Rudolf; Xiaohui Yan; Ben Shen
Journal:  J Ind Microbiol Biotechnol       Date:  2015-08-29       Impact factor: 3.346

2.  Characterization and Crystal Structure of a Nonheme Diiron Monooxygenase Involved in Platensimycin and Platencin Biosynthesis.

Authors:  Liao-Bin Dong; Yu-Chen Liu; Alexis J Cepeda; Edward Kalkreuter; Ming-Rong Deng; Jeffrey D Rudolf; Changsoo Chang; Andrzej Joachimiak; George N Phillips; Ben Shen
Journal:  J Am Chem Soc       Date:  2019-07-23       Impact factor: 15.419

3.  Cryptic and Stereospecific Hydroxylation, Oxidation, and Reduction in Platensimycin and Platencin Biosynthesis.

Authors:  Liao-Bin Dong; Xiao Zhang; Jeffrey D Rudolf; Ming-Rong Deng; Edward Kalkreuter; Alexis J Cepeda; Hans Renata; Ben Shen
Journal:  J Am Chem Soc       Date:  2019-02-19       Impact factor: 15.419

4.  A Facile Semi-Synthetic Approach towards Halogen-Substituted Aminobenzoic Acid Analogues of Platensimycin.

Authors:  Lin Qiu; Kai Tian; Jian Pan; Lin Jiang; Hu Yang; Xiangcheng Zhu; Ben Shen; Yanwen Duan; Yong Huang
Journal:  Tetrahedron       Date:  2016-12-28       Impact factor: 2.457

Review 5.  Structural and Chemical Biology of Terpenoid Cyclases.

Authors:  David W Christianson
Journal:  Chem Rev       Date:  2017-08-25       Impact factor: 60.622

Review 6.  Challenges and opportunities for natural product discovery, production, and engineering in native producers versus heterologous hosts.

Authors:  Christiana N Teijaro; Ajeeth Adhikari; Ben Shen
Journal:  J Ind Microbiol Biotechnol       Date:  2018-11-13       Impact factor: 3.346

Review 7.  Leveraging a large microbial strain collection for natural product discovery.

Authors:  Andrew D Steele; Christiana N Teijaro; Dong Yang; Ben Shen
Journal:  J Biol Chem       Date:  2019-09-30       Impact factor: 5.157

8.  A Mutasynthetic Library of Platensimycin and Platencin Analogues.

Authors:  Liao-Bin Dong; Jeffrey D Rudolf; Ben Shen
Journal:  Org Lett       Date:  2016-09-06       Impact factor: 6.005

9.  Antibacterial sulfur-containing platensimycin and platencin congeners from Streptomyces platensis SB12029.

Authors:  Liao-Bin Dong; Jeffrey D Rudolf; Ben Shen
Journal:  Bioorg Med Chem       Date:  2016-04-13       Impact factor: 3.641

10.  Titer improvement and pilot-scale production of platensimycin from Streptomyces platensis SB12026.

Authors:  Jun Shi; Jian Pan; Ling Liu; Dong Yang; Songquan Lu; Xiangcheng Zhu; Ben Shen; Yanwen Duan; Yong Huang
Journal:  J Ind Microbiol Biotechnol       Date:  2016-04-28       Impact factor: 3.346

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