| Literature DB >> 26039365 |
Yong An1, Yong-Tao Wang1, Yi-Tong Ma1, Muhuyati Wulasihan2, Ying Huang1, Dilare Adi1, Yi-Ning Yang1, Xiang Ma1, Xiao-Mei Li1, Xiang Xie1, Ding Huang2, Fen Liu3, Bang-Dang Chen3.
Abstract
OBJECTIVE: Valvular calcification occurs via ongoing endothelial injury associated with inflammation. IL-10 is an anti-inflammatory cytokine and 75% of the variation in IL-10 production is genetically determined. However, the relationship between genetic polymorphisms of IL-10 and valvular calcification has not been studied. The objective of this study was to investigate the association between valvular calcification and IL-10 genetic polymorphisms in the Han, Uygur and Kazak populations in China. PATIENTS AND METHODS: All of the participants were selected from subjects participating in the Cardiovascular Risk Survey (CRS) study. The single nucleotide polymorphisms (SNPs) rs1800871 and rs1800872 of the IL-10 gene were genotyped using the polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) method. Three independent case-control studies involving the Han population, the Uygur population and the Kazak population were used in the analysis.Entities:
Mesh:
Substances:
Year: 2015 PMID: 26039365 PMCID: PMC4454577 DOI: 10.1371/journal.pone.0128965
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
The primer sequences for each SNP.
| SNPs | Polymerase chain reaction primers | Denaturation temperature | Products length | Restriction enzyme |
|---|---|---|---|---|
| rs1800871 | Sense | 51.3°C | 593 | Msl I |
| Antisense | ||||
| rs1800872 | Sense | 51.3°C | 482 | Afa I |
| Antisense |
Fig 1The restriction fragment length polymorphism analysis to determine the genotype.
A. For rs1800871, the TT genotype shows one 593-bp band (1 and 3); the CC genotype shows two bands at 431 bp and 162 bp (5 and 7); and the CT genotype shows three bands at 593 bp, 431 bp and 162 bp (2, 4 and 6). B. For rs1800872, the CC genotype shows one 482-bp band (1 and 5); the AA genotype shows two bands at 258 bp and 224 bp (2, 3 and 4); and the AC genotype shows three bands at 482 bp, 258 bp and 224 bp (6 and 7).
Demographic and clinical characteristics of study participants.
| Han | Uygur | Kazak | |||||||
|---|---|---|---|---|---|---|---|---|---|
| Valvular calcification | Control | P value | Valvular calcification | Control | P value | Valvular calcification | Control | P value | |
| Number(n) | 194 | 411 | 59 | 133 | 81 | 187 | |||
| Age,years | 67.58(8.21 | 67.22(8.93 | 0.629 | 67.30(10.8 | 67.05(10.24 | 0.873 | 67.32(7.74) | 66.47(8.93) | 0.454 |
| Sex,female, | 83(42.8) | 177(43.1) | 0.948 | 37(62.7) | 63(47.4) | 0.06 | 44(54.3) | 93(49.7) | 0.49 |
| Hypertensio | 119(61.3) | 201(48.9) | 0.004 | 36(61) | 69(51.9) | 0.273 | 69(85.2) | 104(55.6) | <0.001 |
| Diabetes, n | 34(17.5) | 46(11.2) | 0.032 | 4(6.8) | 6(4.5) | 0.5 | 4(4.9) | 6(3.2) | 0.493 |
| Smoking, n | 55(28.4) | 101(24.6) | 0.322 | 10(16.9) | 4(3) | <0.001 | 27(33.3) | 47(25.1) | 0.168 |
| Drinking, n | 20(10.3) | 47(11.4) | 0.68 | 24(40.7) | 13(9.8) | <0.001 | 5(6.2) | 9(4.8) | 0.646 |
| BMI,kg/m2 | 25.84(3.71 | 25.85(3.59 | 0.973 | 24.87(4.12 | 25.27(4.52 | 0.487 | 28.02(4.79) | 26.44(4.18) | 0.007 |
| SBP,mm H | 144.35(19.1 | 139.81(18.5 | 0.006 | 146.24(30.3 | 135.89(19.5 | 0.005 | 164.83(29.61) | 148.48(25.87) | <0.001 |
| DBP,mm H | 86.36(14.87 | 86.64(16.18 | 0.839 | 88.19(19.84 | 81.89(13.28 | 0.011 | 110.64(22.75) | 90.41(19.68) | <0.001 |
| Glucose,m | 5.78(2.04) | 5.48(1.81) | 0.073 | 4.69(1.35) | 4.64(1.15) | 0.799 | 5.41(2.03) | 5.29(2.01) | 0.637 |
| TG,mmol/L | 1.61(1.19) | 1.65(1.36) | 0.746 | 1.58(0.93) | 1.43(0.85) | 0.282 | 1.17(0.57) | 1.30(1.05) | 0.327 |
| TC,mmol/L | 4.67(1.11) | 4.42(1.22) | 0.019 | 4.89(1.16) | 4.38(1.07) | 0.003 | 5.21(1.07) | 4.79(1.07) | 0.004 |
| HDL,mmol/ | 1.24(0.46) | 1.25(0.52) | 0.901 | 1.27(0.40) | 1.26(0.42) | 0.877 | 1.30(0.43) | 1.28(0.42) | 0.684 |
| LDL,mmol/ | 2.94(1.00) | 2.69(0.84) | 0.001 | 3.08(1.01) | 2.71(0.81) | 0.007 | 3.08(0.95) | 2.81(1.00) | 0.037 |
| UA,umol/L | 314.62(93.6 | 300.67(81.0 | 0.061 | 260(68.08) | 252.68(71.9 | 0.51 | 268.28(86.43) | 272.02(74.99) | 0.721 |
| SCr,umol/L | 76.46(23.92 | 76.56(40.75 | 0.975 | 80.06(30.24 | 72.73(26.36 | 0.091 | 76.65(17.97) | 68.94(19.96) | 0.003 |
| BUN,mmol/ | 5.36(1.66) | 5.25(1.59) | 0.447 | 5.78(1.63) | 6.18(3.19) | 0.362 | 5.18(1.77) | 4.93(1.56) | 0.257 |
Note: 1 mm Hg = 0.133 KPa; Glucose: 1mmol/L = 18 mg/dl; TG: 1mmol/L = 88.6 mg/dl; TC: 1mmol/L = 38.7 mg/dl; HDL: 1mmol/L = 38.7 mg/dl; LDL: 38.7 mg/dl; UA: 1umol/L = 0.0168 mg/dl; SCr: 1umol/L = 0.0113 mg/dl; BUN: 1mmol/L = 2.8 mg/dl;Normal ranges for laboratory values: SBP: 90–139 mm Hg; DBP: 60–89 mm Hg; Glucose: 3.9–6.1 mmol/L; TG: 0.56–1.7 mmol/L; TC: 2.8–5.72 mmol/L; HDL: 1.16–1.55 mmol/L; LDL: 2.7–3.1 mmol/L; UA: 208–428 umol/L; SCr: 53–115 umol/L; BUN: 2.9–8.2 mmol/L.
Genotype and Allele distributions in patients with valvular calcification and control participants.
| Han | Uygur | Kazak | |||||||
|---|---|---|---|---|---|---|---|---|---|
| Variant | Valvular calcification(%) | control(%) | P value | Valvular calcification(%) | control(%) | P value | Valvular calcification(%) | control(%) | P value |
| rs1800871 | |||||||||
| Genotype | |||||||||
| TT | 107(55.2) | 167(40.6) | 13(22) | 27(20.3) | 31(38.3) | 48(25.7) | |||
| CC | 20(10.3) | 59(14.4) | 20(33.9) | 39(29.3) | 13(16) | 40(21.4) | |||
| CT | 67(34.5) | 185(45) | 0.004 | 26(44.1) | 67(50.4) | 0.714 | 37(45.7) | 99(52.9) | 0.108 |
| Dominant model | |||||||||
| CC | 20(10.3) | 59(14.4) | 20(33.9) | 39(29.3) | 13(16) | 40(21.4) | |||
| CT+TT | 174(89.7) | 352(85.6) | 0.168 | 39(66.1) | 94(70.7) | 0.526 | 68(84) | 147(78.6) | 0.313 |
| Recessive model | |||||||||
| TT | 107(55.2) | 167(40.6) | 13(22) | 27(20.3) | 31(38.3) | 48(25.7) | |||
| CT+CC | 87(44.8) | 244(59.4) | 0.001 | 46(78) | 106(79.7) | 0.785 | 50(61.7) | 139(74.3) | 0.038 |
| Additive model | |||||||||
| CT | 67(34.5) | 185(45) | 26(44.1) | 67(50.4) | 37(45.7) | 99(52.9) | |||
| CC+TT | 127(65.5) | 226(55) | 0.015 | 33(55.9) | 66(49.6) | 0.42 | 44(54.3) | 88(47.1) | 0.275 |
| Allele | |||||||||
| C | 107(27.6) | 303(36.9) | 66(55.9) | 145(54.5) | 63(38.9) | 179(47.86) | |||
| T | 281(72.4) | 519(63.1) | 0.001 | 52(44.1) | 121(45.5) | 0.796 | 99(61.1) | 195(52.14) | 0.055 |
| rs1800872 | |||||||||
| genotype | |||||||||
| CC | 64(33) | 63(15.3) | 31(52.2) | 46(34.6) | 36(44.4) | 55(29.4) | |||
| AA | 77(39.7) | 163(39.7) | 10(16.9) | 26(19.5) | 18(22.2) | 50(26.7) | |||
| AC | 53(27.3) | 185(45) | 0 | 18(30.5) | 61(45.9) | 0.056 | 27(33.3) | 82(43.9) | 0.056 |
| Dominant model | |||||||||
| CC | 64(33) | 63(15.3) | 31(52.2) | 46(34.6) | 36(44.4) | 55(29.4) | |||
| AC+AA | 130(67) | 348(84.7) | 0 | 28(47.5) | 87(65.4) | 0.019 | 45(55.6) | 132(70.6) | 0.017 |
| Recessive model | |||||||||
| AA | 77(39.7) | 163(39.7) | 10(16.9) | 26(19.5) | 18(22.2) | 50(26.7) | |||
| AC+CC | 117(60.3) | 248(60.3) | 0.994 | 49(83.) | 107(80.5) | 0.67 | 63(77.8) | 137(73.3) | 0.435 |
| Additive model | |||||||||
| AC | 53(27.3) | 185(45) | 18((30.5) | 61(45.9) | 27(33.3) | 82(43.9) | |||
| AA+CC | 141(72.7) | 226(55) | 0 | 41(69.5) | 72(54.1) | 0.046 | 54(66.7) | 105(56.1) | 0.107 |
| Allele | |||||||||
| C | 181(46.6) | 311(37.8) | 80(67.8) | 153(57.5) | 99(61.1) | 192(51.3) | |||
| A | 207(53.4) | 511(62.2) | 0.004 | 38(32.2) | 113(42.5) | 0.057 | 63(38.9) | 182(48.7) | 0.037 |
Results of Logistic analysis (rs1800871).
| Han | Kazak | ||||||
|---|---|---|---|---|---|---|---|
| OR | 95% C.I. | P | OR | 95% C.I. | P | ||
| Recessive model 1 | 1.797 | 1.273–2.536 | 0.001 | Recessive model 1 | 1.795 | 1.030–3.129 | 0.039 |
| Recessive model | 1.894 | 1.324–2.709 | <0.001 | Recessive model | 1.952 | 1.062–3.586 | 0.031 |
| TC | 1.178 | 1.010–1.373 | 0.037 | TC | 1.413 | 1.081–1.846 | 0.011 |
| LDL | 1.424 | 1.170–1.732 | <0.001 | LDL | 1.391 | 1.051–1.841 | 0.021 |
| Hypertention | 1.612 | 1.119–2.322 | 0.01 | Hypertention | 4.091 | 2.017–8.298 | <0.001 |
| DM | 1.784 | 1.077–2.957 | 0.025 | BMI | 1.057 | 0.991–1.127 | 0.093 |
Recessive model 1: Unadjusted model; Recessive model: adjusted model.
Results of Logistic analysis (rs1800872).
| Han | Uygur | Kazak | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| OR | 95% C.I. | P | OR | 95% C.I. | P | OR | 95% C.I. | P | |||
| Dominant model 1 | 1.795 | 1.03–3.129 | 0.039 | Dominant model 1 | 2.094 | 1.122–3.906 | 0.02 | Dominant model 1 | 1.92 | 1.119–3.293 | 0.018 |
| Dominant model | 2.565 | 1.699–3.874 | <0.001 | Dominant model | 2.621 | 1.275–5.387 | 0.009 | Dominant model | 1.981 | 1.100–3.570 | 0.023 |
| TC | 1.199 | 1.027–1.399 | 0.021 | TC | 1.613 | 1.159–2.244 | 0.005 | TC | 1.4 | 1.066–1.839 | 0.016 |
| LDL | 1.398 | 1.147–1.704 | 0.001 | LDL | 1.312 | 0.881–1.953 | 0.181 | LDL | 1.419 | 1.072–1.880 | 0.014 |
| Hypertension | 1.495 | 1.035–2.158 | 0.032 | Hypertension | 1.73 | 0.840–3.561 | 0.137 | Hypertension | 4.233 | 2.081–8.608 | <0.001 |
| DM | 1.593 | 0.961–2.640 | 0.071 | Smoking | 3.693 | 2.030–6.721 | <0.001 | BMI | 1.041 | 0.976–1.110 | 0.22 |
Dominant model 1: Unadjusted model; Dominant model: adjusted model.