Literature DB >> 25866296

Ion-dipole interactions and their functions in proteins.

Katherine H Sippel1, Florante A Quiocho1.   

Abstract

Ion-dipole interactions in biological macromolecules are formed between atomic or molecular ions and neutral protein dipolar groups through either hydrogen bond or coordination. Since their discovery 30 years ago, these interactions have proven to be a frequent occurrence in protein structures, appearing in everything from transporters and ion channels to enzyme active sites to protein-protein interfaces. However, their significance and roles in protein functions are largely underappreciated. We performed PDB data mining to identify a sampling of proteins that possess these interactions. In this review, we will define the ion-dipole interaction and discuss several prominent examples of their functional roles in nature.
© 2015 The Protein Society.

Entities:  

Keywords:  ABC transport receptors; AP180; IMP dehydrogenase; Ion-dipole interaction; SNARE; ion channel; phage tail proteins; serine protease

Mesh:

Substances:

Year:  2015        PMID: 25866296      PMCID: PMC4500305          DOI: 10.1002/pro.2685

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  26 in total

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  6 in total

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Authors:  Yutao Tian; Marius Aursnes; Trond Vidar Hansen; Jørn Eivind Tungen; Jason D Galpin; Lilia Leisle; Christopher A Ahern; Rong Xu; Stefan H Heinemann; Toshinori Hoshi
Journal:  Proc Natl Acad Sci U S A       Date:  2016-11-14       Impact factor: 11.205

Review 2.  Catalytic scaffolds for phosphoryl group transfer.

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Journal:  Curr Opin Struct Biol       Date:  2016-08-13       Impact factor: 6.809

3.  Anionic Species Regulate Chemical Storage in Nanometer Vesicles and Amperometrically Detected Exocytotic Dynamics.

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4.  Structural basis of ion - substrate coupling in the Na+-dependent dicarboxylate transporter VcINDY.

Authors:  David B Sauer; Jennifer J Marden; Joseph C Sudar; Jinmei Song; Christopher Mulligan; Da-Neng Wang
Journal:  Nat Commun       Date:  2022-05-12       Impact factor: 17.694

5.  IBPred: A sequence-based predictor for identifying ion binding protein in phage.

Authors:  Shi-Shi Yuan; Dong Gao; Xue-Qin Xie; Cai-Yi Ma; Wei Su; Zhao-Yue Zhang; Yan Zheng; Hui Ding
Journal:  Comput Struct Biotechnol J       Date:  2022-08-28       Impact factor: 6.155

6.  A Fully Biodegradable Ferroelectric Skin Sensor from Edible Porcine Skin Gelatine.

Authors:  Sujoy Kumar Ghosh; Jonghwa Park; Sangyun Na; Minsoo P Kim; Hyunhyub Ko
Journal:  Adv Sci (Weinh)       Date:  2021-05-07       Impact factor: 16.806

  6 in total

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