| Literature DB >> 25837767 |
Yanqiong Liu1, Li Xie, Jiangyang Zhao, Xiuli Huang, Liuying Song, Jingrong Luo, Liping Ma, Shan Li, Xue Qin.
Abstract
Reactive oxygen species (ROS) play critical roles in hepatocarcinogenesis. The catalase (CAT) enzyme is involved in the repair of ROS. Therefore, we investigate the association between CAT gene polymorphisms and the risk of hepatocellular carcinoma (HCC). A total of 715 subjects were divided into 4 groups: 111 chronic hepatitis B (CHB) patients, 90 hepatitis B virus (HBV)-related liver cirrhosis (LC) patients, 266 HBV-HCC patients, and 248 healthy controls. The polymerase chain reaction-restriction fragment length polymorphism strategy was used to detect CAT gene rs1001179, rs769217, and rs7943316 polymorphisms. Binary logistic regression analyses adjusting for sex, age, ethnicity, smoking and alcohol consumption, and body mass index suggested that subjects carrying the rs769217 T allele were at marginally increased risk of CHB, LC, and HCC, with adjusted odds ratios (ORs) of 1.51 (95% confidence interval [CI] = 1.04-2.20, P = 0.029), 1.48 (95% CI = 1.03-2.14, P = 0.035), and 1.51 (95% CI = 1.14-1.98, P = 0.004), respectively. Similarly, those individuals carrying the rs769217 TT genotype had a moderately increased risk of CHB, LC, and HCC, with adjusted ORs of 2.11 (95% CI = 1.05-4.22, P = 0.035), 2.00 (95% CI, 1.01-3.95, P = 0.047), and 1.93 (95% CI = 1.14-3.28, P = 0.015), respectively. Moreover, subjects carrying the rs769217 CT genotype and at least 1 copy of the T allele (dominant model) were 1.78 times and 1.83 times more likely to develop HCC, respectively (OR = 1.78, 95% CI = 1.16-2.73, P = 0.009 and OR = 1.83, 95% CI = 1.23-2.71, P = 0.003). This association between CAT rs769217 T alleles and HCC risk is significantly strengthened among men, nonsmokers, nondrinkers, and among individuals <50 years of age. Furthermore, we found 1 high-risk haplotype GTA for CHB (OR = 1.45, 95% CI = 1.05-2.01) and 1 protective haplotype GCA for HCC risk (OR = 0.67, 95% CI = 0.52-0.87). We did not found any significant difference in CAT rs1001179 and rs7943316 polymorphisms between controls and cases. Our findings suggest that the CAT rs769217 T allele is associated with increased risk of CHB, HBV-LC, and HBV-HCC in Guangxi population.Entities:
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Year: 2015 PMID: 25837767 PMCID: PMC4554034 DOI: 10.1097/MD.0000000000000702
Source DB: PubMed Journal: Medicine (Baltimore) ISSN: 0025-7974 Impact factor: 1.889
Primer Sequence and the Reaction Condition for Genotyping CAT Polymorphisms
FIGURE 1PCR-RFLP assay for analyzing the rs1001179, rs769217, and rs7943316 polymorphisms in CAT gene. (A) rs1001179—lanes M: DNA marker; lanes 1, 3, 4, 5, 7, and 8 show GG genotype; lanes 2 and 6 show AG genotype; lane 9 shows AA genotype; lane 10 shows negative control. (B) rs769217—lanes M: DNA marker; lanes 1, 4, 5, 7, 8, and 9 show CT genotype; lanes 2 and 6 show CC genotype; lane 3 shows TT genotypes; lanes 10 shows negative control. (C) rs7943316—lanes M: DNA marker; lanes 1 and 8 show AA genotype; lanes 2, 3, 7, and 9 show AT genotype; lane 4, 5, and 6 shows TT genotypes; lanes 10 shows negative control. PCR-RFLP = polymerase chain reaction-restriction fragment length polymorphism.
Baseline Characteristics of the Study Population
Genotype Distributions and Allele Frequencies of CAT Polymorphisms Between Cases and Controls
Analysis of CAT Haplotype Frequencies With the Risk of CHB, LC, and HCC