Literature DB >> 25826720

Marine sequestration of carbon in bacterial metabolites.

Oliver J Lechtenfeld1,2, Norbert Hertkorn3, Yuan Shen1, Matthias Witt4, Ronald Benner1.   

Abstract

Linking microbial metabolomics and carbon sequestration in the ocean via refractory organic molecules has been hampered by the chemical complexity of dissolved organic matter (DOM). Here, using bioassay experiments and ultra-high resolution metabolic profiling, we demonstrate that marine bacteria rapidly utilize simple organic molecules and produce exometabolites of remarkable molecular and structural diversity. Bacterial DOM is similar in chemical composition and structural complexity to naturally occurring DOM in sea water. An appreciable fraction of bacterial DOM has molecular and structural properties that are consistent with those of refractory molecules in the ocean, indicating a dominant role for bacteria in shaping the refractory nature of marine DOM. The rapid production of chemically complex and persistent molecules from simple biochemicals demonstrates a positive feedback between primary production and refractory DOM formation. It appears that carbon sequestration in diverse and structurally complex dissolved molecules that persist in the environment is largely driven by bacteria.

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Year:  2015        PMID: 25826720     DOI: 10.1038/ncomms7711

Source DB:  PubMed          Journal:  Nat Commun        ISSN: 2041-1723            Impact factor:   14.919


  27 in total

1.  Self-assembling amphiphilic siderophores from marine bacteria.

Authors:  J S Martinez; G P Zhang; P D Holt; H T Jung; C J Carrano; M G Haygood; A Butler
Journal:  Science       Date:  2000-02-18       Impact factor: 47.728

Review 2.  Genomic perspectives in microbial oceanography.

Authors:  Edward F DeLong; David M Karl
Journal:  Nature       Date:  2005-09-15       Impact factor: 49.962

3.  Community genomics among stratified microbial assemblages in the ocean's interior.

Authors:  Edward F DeLong; Christina M Preston; Tracy Mincer; Virginia Rich; Steven J Hallam; Niels-Ulrik Frigaard; Asuncion Martinez; Matthew B Sullivan; Robert Edwards; Beltran Rodriguez Brito; Sallie W Chisholm; David M Karl
Journal:  Science       Date:  2006-01-27       Impact factor: 47.728

4.  Fundamentals of molecular formula assignment to ultrahigh resolution mass data of natural organic matter.

Authors:  Boris P Koch; Thorsten Dittmar; Matthias Witt; Gerhard Kattner
Journal:  Anal Chem       Date:  2007-02-15       Impact factor: 6.986

5.  Revisiting carbon flux through the ocean's twilight zone.

Authors:  Ken O Buesseler; Carl H Lamborg; Philip W Boyd; Phoebe J Lam; Thomas W Trull; Robert R Bidigare; James K B Bishop; Karen L Casciotti; Frank Dehairs; Marc Elskens; Makio Honda; David M Karl; David A Siegel; Mary W Silver; Deborah K Steinberg; Jim Valdes; Benjamin Van Mooy; Stephanie Wilson
Journal:  Science       Date:  2007-04-27       Impact factor: 47.728

Review 6.  Microbial community structure and its functional implications.

Authors:  Jed A Fuhrman
Journal:  Nature       Date:  2009-05-14       Impact factor: 49.962

7.  Activity of abundant and rare bacteria in a coastal ocean.

Authors:  Barbara J Campbell; Liying Yu; John F Heidelberg; David L Kirchman
Journal:  Proc Natl Acad Sci U S A       Date:  2011-07-18       Impact factor: 11.205

8.  Microbial metabolic exchange--the chemotype-to-phenotype link.

Authors:  Vanessa V Phelan; Wei-Ting Liu; Kit Pogliano; Pieter C Dorrestein
Journal:  Nat Chem Biol       Date:  2011-12-15       Impact factor: 15.040

Review 9.  Prokaryotes: the unseen majority.

Authors:  W B Whitman; D C Coleman; W J Wiebe
Journal:  Proc Natl Acad Sci U S A       Date:  1998-06-09       Impact factor: 11.205

10.  High metabolomic microdiversity within co-occurring isolates of the extremely halophilic bacterium Salinibacter ruber.

Authors:  Josefa Antón; Marianna Lucio; Arantxa Peña; Ana Cifuentes; Jocelyn Brito-Echeverría; Franco Moritz; Dimitrios Tziotis; Cristina López; Mercedes Urdiain; Philippe Schmitt-Kopplin; Ramon Rosselló-Móra
Journal:  PLoS One       Date:  2013-05-31       Impact factor: 3.240

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  27 in total

1.  Inefficient microbial production of refractory dissolved organic matter in the ocean.

Authors:  Helena Osterholz; Jutta Niggemann; Helge-Ansgar Giebel; Meinhard Simon; Thorsten Dittmar
Journal:  Nat Commun       Date:  2015-06-18       Impact factor: 14.919

2.  The importance of anabolism in microbial control over soil carbon storage.

Authors:  Chao Liang; Joshua P Schimel; Julie D Jastrow
Journal:  Nat Microbiol       Date:  2017-07-25       Impact factor: 17.745

3.  Deciphering ocean carbon in a changing world.

Authors:  Mary Ann Moran; Elizabeth B Kujawinski; Aron Stubbins; Rob Fatland; Lihini I Aluwihare; Alison Buchan; Byron C Crump; Pieter C Dorrestein; Sonya T Dyhrman; Nancy J Hess; Bill Howe; Krista Longnecker; Patricia M Medeiros; Jutta Niggemann; Ingrid Obernosterer; Daniel J Repeta; Jacob R Waldbauer
Journal:  Proc Natl Acad Sci U S A       Date:  2016-03-07       Impact factor: 11.205

4.  Reactivity, fate and functional roles of dissolved organic matter in anoxic inland waters.

Authors:  Maximilian P Lau; Paul Del Giorgio
Journal:  Biol Lett       Date:  2020-02-26       Impact factor: 3.703

5.  Tracing Aquatic Priming Effect During Microbial Decomposition of Terrestrial Dissolved Organic Carbon in Chemostat Experiments.

Authors:  Karoline Morling; Julia Raeke; Norbert Kamjunke; Thorsten Reemtsma; Jörg Tittel
Journal:  Microb Ecol       Date:  2017-04-07       Impact factor: 4.552

Review 6.  Microbial metabolites in the marine carbon cycle.

Authors:  Mary Ann Moran; Elizabeth B Kujawinski; William F Schroer; Shady A Amin; Nicholas R Bates; Erin M Bertrand; Rogier Braakman; C Titus Brown; Markus W Covert; Scott C Doney; Sonya T Dyhrman; Arthur S Edison; A Murat Eren; Naomi M Levine; Liang Li; Avena C Ross; Mak A Saito; Alyson E Santoro; Daniel Segrè; Ashley Shade; Matthew B Sullivan; Assaf Vardi
Journal:  Nat Microbiol       Date:  2022-04-01       Impact factor: 30.964

7.  Use of organic exudates from two polar diatoms by bacterial isolates from the Arctic Ocean.

Authors:  Lucas Tisserand; Laëtitia Dadaglio; Laurent Intertaglia; Philippe Catala; Christos Panagiotopoulos; Ingrid Obernosterer; Fabien Joux
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2020-08-31       Impact factor: 4.226

8.  Dynamic processing of DOM: Insight from Exometabolomics, Fluorescence Spectroscopy, and Mass Spectrometry.

Authors:  H J Smith; M Tigges; J D'Andrilli; A Parker; B Bothner; C M Foreman
Journal:  Limnol Oceanogr Lett       Date:  2018-04-25

9.  Microbial iron and carbon metabolism as revealed by taxonomy-specific functional diversity in the Southern Ocean.

Authors:  Ying Sun; Pavla Debeljak; Ingrid Obernosterer
Journal:  ISME J       Date:  2021-05-03       Impact factor: 11.217

10.  Single-Cell Genome and Group-Specific dsrAB Sequencing Implicate Marine Members of the Class Dehalococcoidia (Phylum Chloroflexi) in Sulfur Cycling.

Authors:  Kenneth Wasmund; Myriel Cooper; Lars Schreiber; Karen G Lloyd; Brett J Baker; Dorthe G Petersen; Bo Barker Jørgensen; Ramunas Stepanauskas; Richard Reinhardt; Andreas Schramm; Alexander Loy; Lorenz Adrian
Journal:  MBio       Date:  2016-05-03       Impact factor: 7.867

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