Literature DB >> 25821238

Reaction Pathway and Free Energy Barrier for Urea Elimination in Aqueous Solution.

Min Yao1, Xi Chen2, Chang-Guo Zhan3.   

Abstract

To accurately predict the free energy barrier for urea elimination in aqueous solution, we examined the reaction coordinates for the direct and water-assisted elimination pathways, and evaluated the corresponding free energy barriers by using the surface and volume polarization for electrostatics (SVPE) model-based first-principles electronic-structure calculations. Based on the computational results, the water-assisted elimination pathway is dominant for urea elimination in aqueous solution, and the corresponding free energy barrier is 25.3 kcal/mol. The free energy barrier of 25.3 kcal/mol predicted for the dominant reaction pathway of urea elimination in aqueous solution is in good agreement with available experimental kinetic data.

Entities:  

Year:  2015        PMID: 25821238      PMCID: PMC4371214          DOI: 10.1016/j.cplett.2015.02.048

Source DB:  PubMed          Journal:  Chem Phys Lett        ISSN: 0009-2614            Impact factor:   2.328


  15 in total

1.  Why urea eliminates ammonia rather than hydrolyzes in aqueous solution.

Authors:  Anastassia N Alexandrova; William L Jorgensen
Journal:  J Phys Chem B       Date:  2007-02-01       Impact factor: 2.991

2.  Development of the Colle-Salvetti correlation-energy formula into a functional of the electron density.

Authors: 
Journal:  Phys Rev B Condens Matter       Date:  1988-01-15

3.  Oxo-hydroxy tautomerism of 5-fluorouracil: water-assisted proton transfer.

Authors:  Nadezhda Markova; Venelin Enchev; Iliana Timtcheva
Journal:  J Phys Chem A       Date:  2005-03-10       Impact factor: 2.781

4.  First-principle studies of intermolecular and intramolecular catalysis of protonated cocaine.

Authors:  Chang-Guo Zhan; Shi-Xian Deng; Jaime G Skiba; Beth A Hayes; Sarah M Tschampel; George C Shields; Donald W Landry
Journal:  J Comput Chem       Date:  2005-07-30       Impact factor: 3.376

5.  Water-assisted proton transfer in ferredoxin I.

Authors:  Stephan Lutz; Ivan Tubert-Brohman; Yonggang Yang; Markus Meuwly
Journal:  J Biol Chem       Date:  2011-04-29       Impact factor: 5.157

6.  Free Energies of Solvation with Surface, Volume, and Local Electrostatic Effects and Atomic Surface Tensions to Represent the First Solvation Shell.

Authors:  Junjun Liu; Casey P Kelly; Alan C Goren; Aleksandr V Marenich; Christopher J Cramer; Donald G Truhlar; Chang-Guo Zhan
Journal:  J Chem Theory Comput       Date:  2010-03-04       Impact factor: 6.006

7.  The burden borne by urease.

Authors:  Brian P Callahan; Yang Yuan; Richard Wolfenden
Journal:  J Am Chem Soc       Date:  2005-08-10       Impact factor: 15.419

8.  The hydrolysis of amides and the proficiency of amidohydrolases. The burden borne by kw.

Authors:  Guillermina Estiu; Kenneth M Merz
Journal:  J Phys Chem B       Date:  2007-05-18       Impact factor: 2.991

9.  An efficient implementation for determining volume polarization in self-consistent reaction field theory.

Authors:  Marius J Vilkas; Chang-Guo Zhan
Journal:  J Chem Phys       Date:  2008-11-21       Impact factor: 3.488

10.  Reaction pathways and free energy barriers for alkaline hydrolysis of insecticide 2-trimethylammonioethyl methylphosphonofluoridate and related organophosphorus compounds: electrostatic and steric effects.

Authors:  Ying Xiong; Chang-Guo Zhan
Journal:  J Org Chem       Date:  2004-11-26       Impact factor: 4.354

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