Literature DB >> 25805498

Microtubule severing by katanin p60 AAA+ ATPase requires the C-terminal acidic tails of both α- and β-tubulins and basic amino acid residues in the AAA+ ring pore.

Ai Johjima1, Kentaro Noi2, Shingo Nishikori1, Hirotsugu Ogi3, Masatoshi Esaki4, Teru Ogura5.   

Abstract

The microtubule (MT) network is highly dynamic and undergoes dramatic reorganizations during the cell cycle. Dimers of α- and β-tubulins rapidly polymerize to and depolymerize from the end of MT fibrils in an intrinsic GTP-dependent manner. MT severing by ATP-driven enzymes such as katanin and spastin contributes significantly to microtubule dynamics, and it has been shown that katanin p60, a AAA+ family protein, has ATPase and MT-severing activities. The mechanism of MT severing by katanin p60 is poorly understood, and the residues in katanin p60 and tubulins important for severing activity were therefore explored in this study. MT-severing activity, but not ATPase activity, was inhibited by mutations of the conserved aromatic residue and the flanking basic residues in the pore region of the katanin p60 hexameric ring. When the acidic residue-rich C-terminal unstructured segment of either α- or β-tubulin was removed, polymerized MTs were resistant to katanin p60 treatment. Interactions between katanin p60 and the mutant MTs, on the other hand, were unaffected. Taken together, these findings led us to propose that the interactions between the positively charged residues of katanin p60 and the acidic tails of both tubulins are essential for efficient severing of MTs.
© 2015 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  ATPases Associated with Diverse Cellular Activities (AAA); Katanin; Microtubule; Sea Urchin; Tubulin; Yeast

Mesh:

Substances:

Year:  2015        PMID: 25805498      PMCID: PMC4416876          DOI: 10.1074/jbc.M114.614768

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  50 in total

1.  Identification of a strong binding site for kinesin on the microtubule using mutant analysis of tubulin.

Authors:  Seiichi Uchimura; Yusuke Oguchi; Miho Katsuki; Takeo Usui; Hiroyuki Osada; Jun-ichi Nikawa; Shin'ichi Ishiwata; Etsuko Muto
Journal:  EMBO J       Date:  2006-11-23       Impact factor: 11.598

2.  The microtubule-severing proteins spastin and katanin participate differently in the formation of axonal branches.

Authors:  Wenqian Yu; Liang Qiang; Joanna M Solowska; Arzu Karabay; Sirin Korulu; Peter W Baas
Journal:  Mol Biol Cell       Date:  2008-01-30       Impact factor: 4.138

Review 3.  AAA+ proteins: diversity in function, similarity in structure.

Authors:  Jamie Snider; Walid A Houry
Journal:  Biochem Soc Trans       Date:  2008-02       Impact factor: 5.407

4.  Spastin, a new AAA protein, is altered in the most frequent form of autosomal dominant spastic paraplegia.

Authors:  J Hazan; N Fonknechten; D Mavel; C Paternotte; D Samson; F Artiguenave; C S Davoine; C Cruaud; A Dürr; P Wincker; P Brottier; L Cattolico; V Barbe; J M Burgunder; J F Prud'homme; A Brice; B Fontaine; B Heilig; J Weissenbach
Journal:  Nat Genet       Date:  1999-11       Impact factor: 38.330

5.  Structural and mechanistic studies of VPS4 proteins.

Authors:  Anna Scott; Hyo-Young Chung; Malgorzata Gonciarz-Swiatek; Gina C Hill; Frank G Whitby; Jason Gaspar; James M Holton; Ramya Viswanathan; Sanaz Ghaffarian; Christopher P Hill; Wesley I Sundquist
Journal:  EMBO J       Date:  2005-09-29       Impact factor: 11.598

6.  Effect of Ca2+ on the microtubule-severing enzyme p60-katanin. Insight into the substrate-dependent activation mechanism.

Authors:  Naoko Iwaya; Kohei Akiyama; Natsuko Goda; Takeshi Tenno; Yoshie Fujiwara; Daizo Hamada; Teikichi Ikura; Masahiro Shirakawa; Hidekazu Hiroaki
Journal:  FEBS J       Date:  2012-03-05       Impact factor: 5.542

7.  Conserved aromatic and basic amino acid residues in the pore region of Caenorhabditis elegans spastin play critical roles in microtubule severing.

Authors:  Yuka Matsushita-Ishiodori; Kunitoshi Yamanaka; Hiroshi Hashimoto; Masatoshi Esaki; Teru Ogura
Journal:  Genes Cells       Date:  2009-07-13       Impact factor: 1.891

8.  Understanding tubulin-Taxol interactions: mutations that impart Taxol binding to yeast tubulin.

Authors:  Mohan L Gupta; Claudia J Bode; Gunda I Georg; Richard H Himes
Journal:  Proc Natl Acad Sci U S A       Date:  2003-05-09       Impact factor: 11.205

9.  Katanin controls mitotic and meiotic spindle length.

Authors:  Karen McNally; Anjon Audhya; Karen Oegema; Francis J McNally
Journal:  J Cell Biol       Date:  2006-12-18       Impact factor: 10.539

10.  Kinesin and tau bind to distinct sites on microtubules.

Authors:  P K Marya; Z Syed; P E Fraylich; P A Eagles
Journal:  J Cell Sci       Date:  1994-01       Impact factor: 5.285

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  17 in total

1.  Katanin Severing and Binding Microtubules Are Inhibited by Tubulin Carboxy Tails.

Authors:  Megan E Bailey; Dan L Sackett; Jennifer L Ross
Journal:  Biophys J       Date:  2015-12-15       Impact factor: 4.033

2.  Peroxisomal monoubiquitinated PEX5 interacts with the AAA ATPases PEX1 and PEX6 and is unfolded during its dislocation into the cytosol.

Authors:  Ana G Pedrosa; Tânia Francisco; Diana Bicho; Ana F Dias; Aurora Barros-Barbosa; Vera Hagmann; Gabriele Dodt; Tony A Rodrigues; Jorge E Azevedo
Journal:  J Biol Chem       Date:  2018-06-08       Impact factor: 5.157

3.  Katanin spiral and ring structures shed light on power stroke for microtubule severing.

Authors:  Elena Zehr; Agnieszka Szyk; Grzegorz Piszczek; Ewa Szczesna; Xiaobing Zuo; Antonina Roll-Mecak
Journal:  Nat Struct Mol Biol       Date:  2017-08-07       Impact factor: 15.369

4.  Katanin Grips the β-Tubulin Tail through an Electropositive Double Spiral to Sever Microtubules.

Authors:  Elena A Zehr; Agnieszka Szyk; Ewa Szczesna; Antonina Roll-Mecak
Journal:  Dev Cell       Date:  2019-11-14       Impact factor: 12.270

Review 5.  Meiotic Clade AAA ATPases: Protein Polymer Disassembly Machines.

Authors:  Nicole Monroe; Christopher P Hill
Journal:  J Mol Biol       Date:  2015-11-10       Impact factor: 5.469

Review 6.  The molecular principles governing the activity and functional diversity of AAA+ proteins.

Authors:  Cristina Puchades; Colby R Sandate; Gabriel C Lander
Journal:  Nat Rev Mol Cell Biol       Date:  2019-11-21       Impact factor: 113.915

7.  Engineered AAA+ proteases reveal principles of proteolysis at the mitochondrial inner membrane.

Authors:  Hui Shi; Anthony J Rampello; Steven E Glynn
Journal:  Nat Commun       Date:  2016-10-27       Impact factor: 14.919

8.  Katanin-like 2 (KATNAL2) functions in multiple aspects of haploid male germ cell development in the mouse.

Authors:  Jessica E M Dunleavy; Hidenobu Okuda; Anne E O'Connor; D Jo Merriner; Liza O'Donnell; Duangporn Jamsai; Martin Bergmann; Moira K O'Bryan
Journal:  PLoS Genet       Date:  2017-11-14       Impact factor: 5.917

9.  Deviation of the typical AAA substrate-threading pore prevents fatal protein degradation in yeast Cdc48.

Authors:  Masatoshi Esaki; Md Tanvir Islam; Naoki Tani; Teru Ogura
Journal:  Sci Rep       Date:  2017-07-14       Impact factor: 4.379

10.  CsKTN1 for a katanin p60 subunit is associated with the regulation of fruit elongation in cucumber (Cucumis sativus L.).

Authors:  Hui Wang; Jing Sun; Fan Yang; Yiqun Weng; Peng Chen; Shengli Du; Aimin Wei; Yuhong Li
Journal:  Theor Appl Genet       Date:  2021-05-27       Impact factor: 5.699

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