Literature DB >> 17124495

Identification of a strong binding site for kinesin on the microtubule using mutant analysis of tubulin.

Seiichi Uchimura1, Yusuke Oguchi, Miho Katsuki, Takeo Usui, Hiroyuki Osada, Jun-ichi Nikawa, Shin'ichi Ishiwata, Etsuko Muto.   

Abstract

The kinesin-binding site on the microtubule has not been identified because of the technical difficulties involved in the mutant analyses of tubulin. Exploiting the budding yeast expression system, we succeeded in replacing the negatively charged residues in the alpha-helix 12 of beta-tubulin with alanine and analyzed their effect on kinesin-microtubule interaction in vitro. The microtubule gliding assay showed that the affinity of the microtubules for kinesin was significantly reduced in E410A, D417A, and E421A, but not in E412A mutant. The unbinding force measurement revealed that in the former three mutants, the kinesin-microtubule interaction in the adenosine 5'-[beta,gamma-imido]triphosphate state (AMP-PNP state) became less stable when a load was imposed towards the microtubule minus end. In parallel with this decreased stability, the stall force of kinesin was reduced. Our results implicate residues E410, D417, and E421 as crucial for the kinesin-microtubule interaction in the strong binding state, thereby governing the size of kinesin stall force.

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Year:  2006        PMID: 17124495      PMCID: PMC1698889          DOI: 10.1038/sj.emboj.7601442

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  49 in total

1.  3D electron microscopy of the interaction of kinesin with tubulin.

Authors:  K Hirose; J Löwe; M Alonso; R A Cross; L A Amos
Journal:  Cell Struct Funct       Date:  1999-10       Impact factor: 2.212

2.  Dynein and kinesin share an overlapping microtubule-binding site.

Authors:  Naoko Mizuno; Shiori Toba; Masaki Edamatsu; Junko Watai-Nishii; Nobutaka Hirokawa; Yoko Y Toyoshima; Masahide Kikkawa
Journal:  EMBO J       Date:  2004-06-03       Impact factor: 11.598

3.  A common mechanism for microtubule destabilizers-M type kinesins stabilize curling of the protofilament using the class-specific neck and loops.

Authors:  Tadayuki Ogawa; Ryo Nitta; Yasushi Okada; Nobutaka Hirokawa
Journal:  Cell       Date:  2004-02-20       Impact factor: 41.582

4.  Dominant effects of tubulin overexpression in Saccharomyces cerevisiae.

Authors:  D Burke; P Gasdaska; L Hartwell
Journal:  Mol Cell Biol       Date:  1989-03       Impact factor: 4.272

5.  Head-head coordination is required for the processive motion of cytoplasmic dynein, an AAA+ molecular motor.

Authors:  Tomohiro Shima; Kenji Imamula; Takahide Kon; Reiko Ohkura; Kazuo Sutoh
Journal:  J Struct Biol       Date:  2006-04-21       Impact factor: 2.867

6.  Bead movement by single kinesin molecules studied with optical tweezers.

Authors:  S M Block; L S Goldstein; B J Schnapp
Journal:  Nature       Date:  1990-11-22       Impact factor: 49.962

7.  Mechanochemical coupling in actomyosin energy transduction studied by in vitro movement assay.

Authors:  Y Harada; K Sakurada; T Aoki; D D Thomas; T Yanagida
Journal:  J Mol Biol       Date:  1990-11-05       Impact factor: 5.469

8.  Movement of microtubules by single kinesin molecules.

Authors:  J Howard; A J Hudspeth; R D Vale
Journal:  Nature       Date:  1989-11-09       Impact factor: 49.962

Review 9.  Comparative analysis of tubulin sequences.

Authors:  M Little; T Seehaus
Journal:  Comp Biochem Physiol B       Date:  1988

10.  Influence of the composition of commercial sodium dodecyl sulfate preparations on the separation of alpha- and beta-tubulin during polyacrylamide gel electrophoresis.

Authors:  D Best; P J Warr; K Gull
Journal:  Anal Biochem       Date:  1981-07-01       Impact factor: 3.365

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  29 in total

Review 1.  Insights into the mechanisms of myosin and kinesin molecular motors from the single-molecule unbinding force measurements.

Authors:  Sergey V Mikhailenko; Yusuke Oguchi; Shin'ichi Ishiwata
Journal:  J R Soc Interface       Date:  2010-03-31       Impact factor: 4.118

2.  The dynein stalk head, the microtubule binding-domain of dynein: NMR assignment and ligand binding.

Authors:  Youské Shimizu; Yusuke Kato; Hisayuki Morii; Masaki Edamatsu; Yoko Yano Toyoshima; Masaru Tanokura
Journal:  J Biomol NMR       Date:  2008-05-20       Impact factor: 2.835

3.  Key residues on microtubule responsible for activation of kinesin ATPase.

Authors:  Seiichi Uchimura; Yusuke Oguchi; You Hachikubo; Shin'ichi Ishiwata; Etsuko Muto
Journal:  EMBO J       Date:  2010-03-11       Impact factor: 11.598

4.  Microtubule severing by katanin p60 AAA+ ATPase requires the C-terminal acidic tails of both α- and β-tubulins and basic amino acid residues in the AAA+ ring pore.

Authors:  Ai Johjima; Kentaro Noi; Shingo Nishikori; Hirotsugu Ogi; Masatoshi Esaki; Teru Ogura
Journal:  J Biol Chem       Date:  2015-03-24       Impact factor: 5.157

5.  Off the rails: axonal cargoes on the road to nowhere.

Authors:  Laura F Gumy; Casper C Hoogenraad
Journal:  EMBO J       Date:  2013-04-23       Impact factor: 11.598

Review 6.  HIV-associated neurodegeneration: exploitation of the neuronal cytoskeleton.

Authors:  Erin D Wenzel; Valeria Avdoshina; Italo Mocchetti
Journal:  J Neurovirol       Date:  2019-03-08       Impact factor: 2.643

Review 7.  Microtubule dynamics: an interplay of biochemistry and mechanics.

Authors:  Gary J Brouhard; Luke M Rice
Journal:  Nat Rev Mol Cell Biol       Date:  2018-07       Impact factor: 94.444

8.  Affinity Purification and Characterization of Functional Tubulin from Cell Suspension Cultures of Arabidopsis and Tobacco.

Authors:  Takashi Hotta; Satoshi Fujita; Seiichi Uchimura; Masahiro Noguchi; Taku Demura; Etsuko Muto; Takashi Hashimoto
Journal:  Plant Physiol       Date:  2016-01-08       Impact factor: 8.340

Review 9.  Mechanical design of translocating motor proteins.

Authors:  Wonmuk Hwang; Matthew J Lang
Journal:  Cell Biochem Biophys       Date:  2009-05-19       Impact factor: 2.194

10.  An inherited TUBB2B mutation alters a kinesin-binding site and causes polymicrogyria, CFEOM and axon dysinnervation.

Authors:  Gustav Y Cederquist; Anna Luchniak; Max A Tischfield; Maya Peeva; Yuyu Song; Manoj P Menezes; Wai-Man Chan; Caroline Andrews; Sheena Chew; Robyn V Jamieson; Lavier Gomes; Maree Flaherty; Patricia Ellen Grant; Mohan L Gupta; Elizabeth C Engle
Journal:  Hum Mol Genet       Date:  2012-09-21       Impact factor: 6.150

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