Literature DB >> 28783150

Katanin spiral and ring structures shed light on power stroke for microtubule severing.

Elena Zehr1, Agnieszka Szyk1, Grzegorz Piszczek2, Ewa Szczesna1, Xiaobing Zuo3, Antonina Roll-Mecak1,4.   

Abstract

Microtubule-severing enzymes katanin, spastin and fidgetin are AAA ATPases important for the biogenesis and maintenance of complex microtubule arrays in axons, spindles and cilia. Because of a lack of known 3D structures for these enzymes, their mechanism of action has remained poorly understood. Here we report the X-ray crystal structure of the monomeric AAA katanin module from Caenorhabditis elegans and cryo-EM reconstructions of the hexamer in two conformations. The structures reveal an unexpected asymmetric arrangement of the AAA domains mediated by structural elements unique to microtubule-severing enzymes and critical for their function. The reconstructions show that katanin cycles between open spiral and closed ring conformations, depending on the ATP occupancy of a gating protomer that tenses or relaxes interprotomer interfaces. Cycling of the hexamer between these conformations would provide the power stroke for microtubule severing.

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Year:  2017        PMID: 28783150      PMCID: PMC7152510          DOI: 10.1038/nsmb.3448

Source DB:  PubMed          Journal:  Nat Struct Mol Biol        ISSN: 1545-9985            Impact factor:   15.369


  81 in total

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Authors:  T R Clandinin; P E Mains
Journal:  Genetics       Date:  1993-05       Impact factor: 4.562

2.  mei-1, a gene required for meiotic spindle formation in Caenorhabditis elegans, is a member of a family of ATPases.

Authors:  S Clark-Maguire; P E Mains
Journal:  Genetics       Date:  1994-02       Impact factor: 4.562

3.  Spectrum of SPG4 mutations in autosomal dominant spastic paraplegia.

Authors:  N Fonknechten; D Mavel; P Byrne; C S Davoine; C Cruaud; D Bönsch; D Boentsch; D Samson; P Coutinho; M Hutchinson; P McMonagle; J M Burgunder; A Tartaglione; O Heinzlef; I Feki; T Deufel; N Parfrey; A Brice; B Fontaine; J F Prud'homme; J Weissenbach; A Dürr; J Hazan
Journal:  Hum Mol Genet       Date:  2000-03-01       Impact factor: 6.150

4.  Size-distribution analysis of macromolecules by sedimentation velocity ultracentrifugation and lamm equation modeling.

Authors:  P Schuck
Journal:  Biophys J       Date:  2000-03       Impact factor: 4.033

5.  Katanin, the microtubule-severing ATPase, is concentrated at centrosomes.

Authors:  F J McNally; K Okawa; A Iwamatsu; R D Vale
Journal:  J Cell Sci       Date:  1996-03       Impact factor: 5.285

6.  Structures of asymmetric ClpX hexamers reveal nucleotide-dependent motions in a AAA+ protein-unfolding machine.

Authors:  Steven E Glynn; Andreas Martin; Andrew R Nager; Tania A Baker; Robert T Sauer
Journal:  Cell       Date:  2009-11-13       Impact factor: 41.582

Review 7.  Frealign: An Exploratory Tool for Single-Particle Cryo-EM.

Authors:  N Grigorieff
Journal:  Methods Enzymol       Date:  2016-06-07       Impact factor: 1.600

8.  Katanin p80 regulates human cortical development by limiting centriole and cilia number.

Authors:  Wen F Hu; Oz Pomp; Tawfeg Ben-Omran; Andrew Kodani; Katrin Henke; Ganeshwaran H Mochida; Timothy W Yu; Mollie B Woodworth; Carine Bonnard; Grace Selva Raj; Thong Teck Tan; Hanan Hamamy; Amira Masri; Mohammad Shboul; Muna Al Saffar; Jennifer N Partlow; Mohammed Al-Dosari; Anas Alazami; Mohammed Alowain; Fowzan S Alkuraya; Jeremy F Reiter; Matthew P Harris; Bruno Reversade; Christopher A Walsh
Journal:  Neuron       Date:  2014-12-17       Impact factor: 17.173

9.  The spindle assembly function of Caenorhabditis elegans katanin does not require microtubule-severing activity.

Authors:  Karen Perry McNally; Francis J McNally
Journal:  Mol Biol Cell       Date:  2011-03-03       Impact factor: 4.138

10.  Measuring the optimal exposure for single particle cryo-EM using a 2.6 Å reconstruction of rotavirus VP6.

Authors:  Timothy Grant; Nikolaus Grigorieff
Journal:  Elife       Date:  2015-05-29       Impact factor: 8.140

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  37 in total

Review 1.  Spiraling in Control: Structures and Mechanisms of the Hsp104 Disaggregase.

Authors:  James Shorter; Daniel R Southworth
Journal:  Cold Spring Harb Perspect Biol       Date:  2019-08-01       Impact factor: 10.005

2.  Long-range intramolecular allostery and regulation in the dynein-like AAA protein Mdn1.

Authors:  Keith J Mickolajczyk; Paul Dominic B Olinares; Yiming Niu; Nan Chen; Sara E Warrington; Yusuke Sasaki; Thomas Walz; Brian T Chait; Tarun M Kapoor
Journal:  Proc Natl Acad Sci U S A       Date:  2020-07-21       Impact factor: 11.205

3.  Structural basis for disassembly of katanin heterododecamers.

Authors:  Stanley Nithianantham; Francis J McNally; Jawdat Al-Bassam
Journal:  J Biol Chem       Date:  2018-05-11       Impact factor: 5.157

4.  Structure of spastin bound to a glutamate-rich peptide implies a hand-over-hand mechanism of substrate translocation.

Authors:  Han Han; Heidi L Schubert; John McCullough; Nicole Monroe; Michael D Purdy; Mark Yeager; Wesley I Sundquist; Christopher P Hill
Journal:  J Biol Chem       Date:  2019-11-25       Impact factor: 5.157

Review 5.  Stairway to translocation: AAA+ motor structures reveal the mechanisms of ATP-dependent substrate translocation.

Authors:  Stephanie N Gates; Andreas Martin
Journal:  Protein Sci       Date:  2019-10-17       Impact factor: 6.725

6.  Structure of the mitochondrial inner membrane AAA+ protease YME1 gives insight into substrate processing.

Authors:  Cristina Puchades; Anthony J Rampello; Mia Shin; Christopher J Giuliano; R Luke Wiseman; Steven E Glynn; Gabriel C Lander
Journal:  Science       Date:  2017-11-03       Impact factor: 47.728

7.  Katanin Grips the β-Tubulin Tail through an Electropositive Double Spiral to Sever Microtubules.

Authors:  Elena A Zehr; Agnieszka Szyk; Ewa Szczesna; Antonina Roll-Mecak
Journal:  Dev Cell       Date:  2019-11-14       Impact factor: 12.270

8.  Structure of Calcarisporiella thermophila Hsp104 Disaggregase that Antagonizes Diverse Proteotoxic Misfolding Events.

Authors:  Karolina Michalska; Kaiming Zhang; Zachary M March; Catherine Hatzos-Skintges; Grigore Pintilie; Lance Bigelow; Laura M Castellano; Leann J Miles; Meredith E Jackrel; Edward Chuang; Robert Jedrzejczak; James Shorter; Wah Chiu; Andrzej Joachimiak
Journal:  Structure       Date:  2018-12-27       Impact factor: 5.006

Review 9.  The molecular principles governing the activity and functional diversity of AAA+ proteins.

Authors:  Cristina Puchades; Colby R Sandate; Gabriel C Lander
Journal:  Nat Rev Mol Cell Biol       Date:  2019-11-21       Impact factor: 113.915

10.  CsKTN1 for a katanin p60 subunit is associated with the regulation of fruit elongation in cucumber (Cucumis sativus L.).

Authors:  Hui Wang; Jing Sun; Fan Yang; Yiqun Weng; Peng Chen; Shengli Du; Aimin Wei; Yuhong Li
Journal:  Theor Appl Genet       Date:  2021-05-27       Impact factor: 5.699

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