Literature DB >> 25727665

Real-time NMR monitoring of biological activities in complex physiological environments.

Matthew J Smith1, Christopher B Marshall1, Francois-Xavier Theillet2, Andres Binolfi2, Philipp Selenko3, Mitsuhiko Ikura4.   

Abstract

Biological reactions occur in a highly organized spatiotemporal context and with kinetics that are modulated by multiple environmental factors. To integrate these variables in our experimental investigations of 'native' biological activities, we require quantitative tools for time-resolved in situ analyses in physiologically relevant settings. Here, we outline the use of high-resolution NMR spectroscopy to directly observe biological reactions in complex environments and in real-time. Specifically, we discuss how real-time NMR (RT-NMR) methods have delineated insights into metabolic processes, post-translational protein modifications, activities of cellular GTPases and their regulators, as well as of protein folding events.
Copyright © 2015 Elsevier Ltd. All rights reserved.

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Year:  2015        PMID: 25727665     DOI: 10.1016/j.sbi.2015.02.003

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  20 in total

1.  Nuclear Magnetic Resonance Spectroscopy for the Identification of Multiple Phosphorylations of Intrinsically Disordered Proteins.

Authors:  Clément Danis; Clément Despres; Luiza M Bessa; Idir Malki; Hamida Merzougui; Isabelle Huvent; Haoling Qi; Guy Lippens; François-Xavier Cantrelle; Robert Schneider; Xavier Hanoulle; Caroline Smet-Nocca; Isabelle Landrieu
Journal:  J Vis Exp       Date:  2016-12-27       Impact factor: 1.355

Review 2.  Intrinsically disordered proteins in crowded milieu: when chaos prevails within the cellular gumbo.

Authors:  Alexander V Fonin; April L Darling; Irina M Kuznetsova; Konstantin K Turoverov; Vladimir N Uversky
Journal:  Cell Mol Life Sci       Date:  2018-07-31       Impact factor: 9.261

3.  Simultaneous analysis of enzyme structure and activity by kinetic capillary electrophoresis-MS.

Authors:  Gleb G Mironov; Christopher M Clouthier; Abdullah Akbar; Jeffrey W Keillor; Maxim V Berezovski
Journal:  Nat Chem Biol       Date:  2016-09-05       Impact factor: 15.040

Review 4.  Intrinsic disorder here, there, and everywhere, and nowhere to escape from it.

Authors:  Vladimir N Uversky
Journal:  Cell Mol Life Sci       Date:  2017-06-06       Impact factor: 9.261

Review 5.  Methyl-Based NMR Spectroscopy Methods for Uncovering Structural Dynamics in Large Proteins and Protein Complexes.

Authors:  Zachary K Boswell; Michael P Latham
Journal:  Biochemistry       Date:  2018-10-26       Impact factor: 3.162

Review 6.  Therapeutic targeting of RAS: New hope for drugging the "undruggable".

Authors:  Imran Khan; J Matthew Rhett; John P O'Bryan
Journal:  Biochim Biophys Acta Mol Cell Res       Date:  2019-10-31       Impact factor: 4.739

7.  Optimized fast mixing device for real-time NMR applications.

Authors:  Rémi Franco; Adrien Favier; Paul Schanda; Bernhard Brutscher
Journal:  J Magn Reson       Date:  2017-05-31       Impact factor: 2.229

8.  Multiple Site-Specific Phosphorylation of IDPs Monitored by NMR.

Authors:  Manon Julien; Chafiaa Bouguechtouli; Ania Alik; Rania Ghouil; Sophie Zinn-Justin; François-Xavier Theillet
Journal:  Methods Mol Biol       Date:  2020

9.  Automated Glycan Assembly of 19 F-labeled Glycan Probes Enables High-Throughput NMR Studies of Protein-Glycan Interactions.

Authors:  Giulio Fittolani; Elena Shanina; Mónica Guberman; Peter H Seeberger; Christoph Rademacher; Martina Delbianco
Journal:  Angew Chem Int Ed Engl       Date:  2021-05-07       Impact factor: 15.336

10.  Crowding in Cellular Environments at an Atomistic Level from Computer Simulations.

Authors:  Michael Feig; Isseki Yu; Po-Hung Wang; Grzegorz Nawrocki; Yuji Sugita
Journal:  J Phys Chem B       Date:  2017-07-12       Impact factor: 2.991

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