Literature DB >> 25719649

Data sharing: Make outbreak research open access.

Nathan L Yozwiak1, Stephen F Schaffner1, Pardis C Sabeti1.   

Abstract

Mesh:

Year:  2015        PMID: 25719649     DOI: 10.1038/518477a

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


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  5 in total

1.  Bermuda rules: community spirit, with teeth.

Authors:  E Marshall
Journal:  Science       Date:  2001-02-16       Impact factor: 47.728

2.  Infectious Diseases. Delays hinder Ebola genomics.

Authors:  Gretchen Vogel
Journal:  Science       Date:  2014-11-07       Impact factor: 47.728

3.  Emergence of Zaire Ebola virus disease in Guinea.

Authors:  Sylvain Baize; Delphine Pannetier; Lisa Oestereich; Toni Rieger; Lamine Koivogui; N'Faly Magassouba; Barrè Soropogui; Mamadou Saliou Sow; Sakoba Keïta; Hilde De Clerck; Amanda Tiffany; Gemma Dominguez; Mathieu Loua; Alexis Traoré; Moussa Kolié; Emmanuel Roland Malano; Emmanuel Heleze; Anne Bocquin; Stephane Mély; Hervé Raoul; Valérie Caro; Dániel Cadar; Martin Gabriel; Meike Pahlmann; Dennis Tappe; Jonas Schmidt-Chanasit; Benido Impouma; Abdoul Karim Diallo; Pierre Formenty; Michel Van Herp; Stephan Günther
Journal:  N Engl J Med       Date:  2014-04-16       Impact factor: 91.245

4.  Prepublication data sharing.

Authors:  Ewan Birney; Thomas J Hudson; Eric D Green; Chris Gunter; Sean Eddy; Jane Rogers; Jennifer R Harris; S Dusko Ehrlich; Rolf Apweiler; Christopher P Austin; Lisa Berglund; Martin Bobrow; Chas Bountra; Anthony J Brookes; Anne Cambon-Thomsen; Nigel P Carter; Rex L Chisholm; Jorge L Contreras; Robert M Cooke; William L Crosby; Ken Dewar; Richard Durbin; Stephanie O M Dyke; Joseph R Ecker; Khaled El Emam; Lars Feuk; Stacey B Gabriel; John Gallacher; William M Gelbart; Antoni Granell; Francisco Guarner; Tim Hubbard; Scott A Jackson; Jennifer L Jennings; Yann Joly; Steven M Jones; Jane Kaye; Karen L Kennedy; Bartha Maria Knoppers; Nikos C Kyrpides; William W Lowrance; Jingchu Luo; John J MacKay; Luis Martín-Rivera; W Richard McCombie; John D McPherson; Linda Miller; Webb Miller; Don Moerman; Vincent Mooser; Cynthia C Morton; James M Ostell; B F Francis Ouellette; Julian Parkhill; Parminder S Raina; Christopher Rawlings; Steven E Scherer; Stephen W Scherer; Paul N Schofield; Christoph W Sensen; Victoria C Stodden; Michael R Sussman; Toshihiro Tanaka; Janet Thornton; Tatsuhiko Tsunoda; David Valle; Eero I Vuorio; Neil M Walker; Susan Wallace; George Weinstock; William B Whitman; Kim C Worley; Cathy Wu; Jiayan Wu; Jun Yu
Journal:  Nature       Date:  2009-09-10       Impact factor: 49.962

5.  Genomic surveillance elucidates Ebola virus origin and transmission during the 2014 outbreak.

Authors:  Stephen K Gire; Augustine Goba; Kristian G Andersen; Rachel S G Sealfon; Daniel J Park; Lansana Kanneh; Simbirie Jalloh; Mambu Momoh; Mohamed Fullah; Gytis Dudas; Shirlee Wohl; Lina M Moses; Nathan L Yozwiak; Sarah Winnicki; Christian B Matranga; Christine M Malboeuf; James Qu; Adrianne D Gladden; Stephen F Schaffner; Xiao Yang; Pan-Pan Jiang; Mahan Nekoui; Andres Colubri; Moinya Ruth Coomber; Mbalu Fonnie; Alex Moigboi; Michael Gbakie; Fatima K Kamara; Veronica Tucker; Edwin Konuwa; Sidiki Saffa; Josephine Sellu; Abdul Azziz Jalloh; Alice Kovoma; James Koninga; Ibrahim Mustapha; Kandeh Kargbo; Momoh Foday; Mohamed Yillah; Franklyn Kanneh; Willie Robert; James L B Massally; Sinéad B Chapman; James Bochicchio; Cheryl Murphy; Chad Nusbaum; Sarah Young; Bruce W Birren; Donald S Grant; John S Scheiffelin; Eric S Lander; Christian Happi; Sahr M Gevao; Andreas Gnirke; Andrew Rambaut; Robert F Garry; S Humarr Khan; Pardis C Sabeti
Journal:  Science       Date:  2014-08-28       Impact factor: 47.728

  5 in total
  53 in total

1.  Want to track pandemic variants faster? Fix the bioinformatics bottleneck.

Authors:  Emma B Hodcroft; Nicola De Maio; Rob Lanfear; Duncan R MacCannell; Bui Quang Minh; Heiko A Schmidt; Alexandros Stamatakis; Nick Goldman; Christophe Dessimoz
Journal:  Nature       Date:  2021-03       Impact factor: 49.962

Review 2.  A Primer on Infectious Disease Bacterial Genomics.

Authors:  Tarah Lynch; Aaron Petkau; Natalie Knox; Morag Graham; Gary Van Domselaar
Journal:  Clin Microbiol Rev       Date:  2016-09-07       Impact factor: 26.132

3.  A better way to crack the brain.

Authors:  Zachary F Mainen; Michael Häusser; Alexandre Pouget
Journal:  Nature       Date:  2016-11-10       Impact factor: 49.962

4.  Societal Implications of the Internet of Pathogens.

Authors:  Alexander L Greninger
Journal:  J Clin Microbiol       Date:  2019-05-24       Impact factor: 5.948

5.  Scientific rigor and credibility in the nutrition research landscape.

Authors:  Cynthia M Kroeger; Cutberto Garza; Christopher J Lynch; Esther Myers; Sylvia Rowe; Barbara O Schneeman; Arya M Sharma; David B Allison
Journal:  Am J Clin Nutr       Date:  2018-03-01       Impact factor: 7.045

Review 6.  Zika Virus Infection: Current Concerns and Perspectives.

Authors:  Mari Kannan Maharajan; Aruna Ranjan; Jian Feng Chu; Wei Lim Foo; Zhi Xin Chai; Eileen YinYien Lau; Heuy Mien Ye; Xi Jin Theam; Yen Ling Lok
Journal:  Clin Rev Allergy Immunol       Date:  2016-12       Impact factor: 8.667

7.  Reproducibility will only come with data liberation.

Authors:  Mohammed AlQuraishi; Peter K Sorger
Journal:  Sci Transl Med       Date:  2016-05-18       Impact factor: 17.956

Review 8.  Genomic Analysis of Viral Outbreaks.

Authors:  Shirlee Wohl; Stephen F Schaffner; Pardis C Sabeti
Journal:  Annu Rev Virol       Date:  2016-08-03       Impact factor: 10.431

9.  Open access epidemiological data from the COVID-19 outbreak.

Authors:  Bo Xu; Moritz U G Kraemer
Journal:  Lancet Infect Dis       Date:  2020-02-19       Impact factor: 25.071

10.  Virus genomes reveal factors that spread and sustained the Ebola epidemic.

Authors:  Gytis Dudas; Luiz Max Carvalho; Trevor Bedford; Andrew J Tatem; Guy Baele; Nuno R Faria; Daniel J Park; Jason T Ladner; Armando Arias; Danny Asogun; Filip Bielejec; Sarah L Caddy; Matthew Cotten; Jonathan D'Ambrozio; Simon Dellicour; Antonino Di Caro; Joseph W Diclaro; Sophie Duraffour; Michael J Elmore; Lawrence S Fakoli; Ousmane Faye; Merle L Gilbert; Sahr M Gevao; Stephen Gire; Adrianne Gladden-Young; Andreas Gnirke; Augustine Goba; Donald S Grant; Bart L Haagmans; Julian A Hiscox; Umaru Jah; Jeffrey R Kugelman; Di Liu; Jia Lu; Christine M Malboeuf; Suzanne Mate; David A Matthews; Christian B Matranga; Luke W Meredith; James Qu; Joshua Quick; Suzan D Pas; My V T Phan; Georgios Pollakis; Chantal B Reusken; Mariano Sanchez-Lockhart; Stephen F Schaffner; John S Schieffelin; Rachel S Sealfon; Etienne Simon-Loriere; Saskia L Smits; Kilian Stoecker; Lucy Thorne; Ekaete Alice Tobin; Mohamed A Vandi; Simon J Watson; Kendra West; Shannon Whitmer; Michael R Wiley; Sarah M Winnicki; Shirlee Wohl; Roman Wölfel; Nathan L Yozwiak; Kristian G Andersen; Sylvia O Blyden; Fatorma Bolay; Miles W Carroll; Bernice Dahn; Boubacar Diallo; Pierre Formenty; Christophe Fraser; George F Gao; Robert F Garry; Ian Goodfellow; Stephan Günther; Christian T Happi; Edward C Holmes; Brima Kargbo; Sakoba Keïta; Paul Kellam; Marion P G Koopmans; Jens H Kuhn; Nicholas J Loman; N'Faly Magassouba; Dhamari Naidoo; Stuart T Nichol; Tolbert Nyenswah; Gustavo Palacios; Oliver G Pybus; Pardis C Sabeti; Amadou Sall; Ute Ströher; Isatta Wurie; Marc A Suchard; Philippe Lemey; Andrew Rambaut
Journal:  Nature       Date:  2017-04-12       Impact factor: 49.962

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