Literature DB >> 25706626

A common variant mapping to CACNA1A is associated with susceptibility to exfoliation syndrome.

Tin Aung1, Mineo Ozaki2, Takanori Mizoguchi3, R Rand Allingham4, Zheng Li5, Aravind Haripriya6, Satoko Nakano7, Steffen Uebe8, Jeffrey M Harder9, Anita S Y Chan10, Mei Chin Lee11, Kathryn P Burdon12, Yury S Astakhov13, Khaled K Abu-Amero14, Juan C Zenteno15, Yildirim Nilgün16, Tomasz Zarnowski17, Mohammad Pakravan18, Leen Abu Safieh19, Liyun Jia20, Ya Xing Wang21, Susan Williams22, Daniela Paoli23, Patricio G Schlottmann24, Lulin Huang25, Kar Seng Sim5, Jia Nee Foo5, Masakazu Nakano26, Yoko Ikeda27, Rajesh S Kumar28, Morio Ueno27, Shin-ichi Manabe29, Ken Hayashi29, Shigeyasu Kazama30, Ryuichi Ideta31, Yosai Mori32, Kazunori Miyata33, Kazuhisa Sugiyama34, Tomomi Higashide34, Etsuo Chihara35, Kenji Inoue36, Satoshi Ishiko37, Akitoshi Yoshida38, Masahide Yanagi39, Yoshiaki Kiuchi39, Makoto Aihara40, Tsutomu Ohashi41, Toshiya Sakurai42, Takako Sugimoto43, Hideki Chuman43, Fumihiko Matsuda44, Kenji Yamashiro45, Norimoto Gotoh45, Masahiro Miyake46, Sergei Y Astakhov13, Essam A Osman47, Saleh A Al-Obeidan47, Ohoud Owaidhah18, Leyla Al-Jasim18, Sami Al Shahwan18, Rhys A Fogarty48, Paul Leo49, Yaz Yetkin16, Çilingir Oğuz16, Mozhgan Rezaei Kanavi18, Afsaneh Nederi Beni18, Shahin Yazdani18, Evgeny L Akopov13, Kai-Yee Toh5, Gareth R Howell9, Andrew C Orr50, Yufen Goh5, Wee Yang Meah5, Su Qin Peh5, Ewa Kosior-Jarecka17, Urszula Lukasik17, Mandy Krumbiegel8, Eranga N Vithana11, Tien Yin Wong51, Yutao Liu52, Allison E Ashley Koch53, Pratap Challa4, Robyn M Rautenbach54, David A Mackey55, Alex W Hewitt56, Paul Mitchell57, Jie Jin Wang57, Ari Ziskind54, Trevor Carmichael22, Rangappa Ramakrishnan6, Kalpana Narendran6, Rangaraj Venkatesh6, Saravanan Vijayan58, Peiquan Zhao59, Xueyi Chen60, Dalia Guadarrama-Vallejo15, Ching Yu Cheng61, Shamira A Perera10, Rahat Husain10, Su-Ling Ho62, Ulrich-Christoph Welge-Luessen63, Christian Mardin63, Ursula Schloetzer-Schrehardt63, Axel M Hillmer64, Stefan Herms65, Susanne Moebus66, Markus M Nöthen67, Nicole Weisschuh68, Rohit Shetty28, Arkasubhra Ghosh69, Yik Ying Teo70, Matthew A Brown49, Ignacio Lischinsky71, Jonathan G Crowston72, Michael Coote72, Bowen Zhao19, Jinghong Sang20, Nihong Zhang20, Qisheng You21, Vera Vysochinskaya73, Panayiota Founti74, Anthoula Chatzikyriakidou75, Alexandros Lambropoulos75, Eleftherios Anastasopoulos74, Anne L Coleman76, M Roy Wilson77, Douglas J Rhee78, Jae Hee Kang79, Inna May-Bolchakova80, Steffen Heegaard81, Kazuhiko Mori26, Wallace L M Alward82, Jost B Jonas83, Liang Xu21, Jeffrey M Liebmann84, Balram Chowbay85, Elke Schaeffeler86, Matthias Schwab87, Fabian Lerner88, Ningli Wang20, Zhenglin Yang25, Paolo Frezzotti89, Shigeru Kinoshita27, John H Fingert82, Masaru Inatani90, Kei Tashiro26, André Reis8, Deepak P Edward91, Louis R Pasquale92, Toshiaki Kubota7, Janey L Wiggs78, Francesca Pasutto8, Fotis Topouzis74, Michael Dubina93, Jamie E Craig48, Nagahisa Yoshimura45, Periasamy Sundaresan58, Simon W M John9, Robert Ritch94, Michael A Hauser95, Chiea-Chuen Khor96.   

Abstract

Exfoliation syndrome (XFS) is the most common recognizable cause of open-angle glaucoma worldwide. To better understand the etiology of XFS, we conducted a genome-wide association study (GWAS) of 1,484 cases and 1,188 controls from Japan and followed up the most significant findings in a further 6,901 cases and 20,727 controls from 17 countries across 6 continents. We discovered a genome-wide significant association between a new locus (CACNA1A rs4926244) and increased susceptibility to XFS (odds ratio (OR) = 1.16, P = 3.36 × 10(-11)). Although we also confirmed overwhelming association at the LOXL1 locus, the key SNP marker (LOXL1 rs4886776) demonstrated allelic reversal depending on the ancestry group (Japanese: OR(A allele) = 9.87, P = 2.13 × 10(-217); non-Japanese: OR(A allele) = 0.49, P = 2.35 × 10(-31)). Our findings represent the first genetic locus outside of LOXL1 surpassing genome-wide significance for XFS and provide insight into the biology and pathogenesis of the disease.

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Year:  2015        PMID: 25706626      PMCID: PMC4605818          DOI: 10.1038/ng.3226

Source DB:  PubMed          Journal:  Nat Genet        ISSN: 1061-4036            Impact factor:   38.330


  34 in total

1.  LOXL1 mutations are associated with exfoliation syndrome in patients from the midwestern United States.

Authors:  John H Fingert; Wallace L M Alward; Young H Kwon; Kai Wang; Luan M Streb; Val C Sheffield; Edwin M Stone
Journal:  Am J Ophthalmol       Date:  2007-12       Impact factor: 5.258

2.  Association of LOXL1 common sequence variants in German and Italian patients with pseudoexfoliation syndrome and pseudoexfoliation glaucoma.

Authors:  Francesca Pasutto; Mandy Krumbiegel; Christian Y Mardin; Daniela Paoli; Robert Lämmer; Bernhard H F Weber; Friedrich E Kruse; Ursula Schlötzer-Schrehardt; André Reis
Journal:  Invest Ophthalmol Vis Sci       Date:  2008-04       Impact factor: 4.799

3.  Genetic association of LOXL1 gene variants and exfoliation glaucoma in a Utah cohort.

Authors:  Xian Yang; Norman A Zabriskie; Vincent S Hau; Haoyu Chen; Zongzhong Tong; Daniel Gibbs; Parisa Farhi; Bradley J Katz; Ling Luo; Erik Pearson; Jason Goldsmith; Xiang Ma; Yukki Kaminoh; Yuhong Chen; Baifeng Yu; Jiexi Zeng; Kang Zhang; Zhenglin Yang
Journal:  Cell Cycle       Date:  2008-02-15       Impact factor: 4.534

4.  Ancestral LOXL1 variants are associated with pseudoexfoliation in Caucasian Australians but with markedly lower penetrance than in Nordic people.

Authors:  Alex W Hewitt; Shiwani Sharma; Kathryn P Burdon; Jie Jin Wang; Paul N Baird; David P Dimasi; David A Mackey; Paul Mitchell; Jamie E Craig
Journal:  Hum Mol Genet       Date:  2007-11-23       Impact factor: 6.150

5.  DNA sequence variants in the LOXL1 gene are associated with pseudoexfoliation glaucoma in a U.S. clinic-based population with broad ethnic diversity.

Authors:  Bao Jian Fan; Louis Pasquale; Cynthia L Grosskreutz; Douglas Rhee; Teresa Chen; Margaret M DeAngelis; Ivana Kim; Elizabeth del Bono; Joan W Miller; Tiansen Li; Jonathan L Haines; Janey L Wiggs
Journal:  BMC Med Genet       Date:  2008-02-06       Impact factor: 2.103

6.  Association of non-synonymous single nucleotide polymorphisms in the LOXL1 gene with pseudoexfoliation syndrome in India.

Authors:  Vedam Lakshmi Ramprasad; Ronnie George; Nagasamy Soumittra; Ferdinamarie Sharmila; Lingam Vijaya; Govindasamy Kumaramanickavel
Journal:  Mol Vis       Date:  2008-02-09       Impact factor: 2.367

7.  Analysis of LOXL1 polymorphisms in a United States population with pseudoexfoliation glaucoma.

Authors:  Pratap Challa; Silke Schmidt; Yutao Liu; Xuejun Qin; Robin R Vann; Pedro Gonzalez; R Rand Allingham; Michael A Hauser
Journal:  Mol Vis       Date:  2008-01-29       Impact factor: 2.367

8.  Evaluation of LOXL1 gene polymorphisms in exfoliation syndrome and exfoliation glaucoma.

Authors:  Jose A Aragon-Martin; Robert Ritch; Jeffrey Liebmann; Colm O'Brien; Karima Blaaow; Franco Mercieca; Anthony Spiteri; Caroline J Cobb; Karim F Damji; Ahti Tarkkanen; Tayebeh Rezaie; Anne H Child; Mansoor Sarfarazi
Journal:  Mol Vis       Date:  2008-03-17       Impact factor: 2.367

9.  Lysyl oxidase-like protein 1 (LOXL1) gene polymorphisms and exfoliation glaucoma in a Central European population.

Authors:  Georg Mossböck; Wilfried Renner; Christoph Faschinger; Otto Schmut; Andreas Wedrich; Martin Weger
Journal:  Mol Vis       Date:  2008-05-09       Impact factor: 2.367

10.  LOXL1 genetic polymorphisms are associated with exfoliation glaucoma in the Japanese population.

Authors:  Kazuhiko Mori; Kojiro Imai; Akira Matsuda; Yoko Ikeda; Shigeta Naruse; Hisako Hitora-Takeshita; Masakazu Nakano; Takazumi Taniguchi; Natsue Omi; Kei Tashiro; Shigeru Kinoshita
Journal:  Mol Vis       Date:  2008-06-05       Impact factor: 2.367

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  36 in total

Review 1.  Association of clusterin (CLU) variants and exfoliation syndrome: An analysis in two Caucasian studies and a meta-analysis.

Authors:  Bao J Fan; Louis R Pasquale; Jae H Kang; Hani Levkovitch-Verbin; Jonathan L Haines; Janey L Wiggs
Journal:  Exp Eye Res       Date:  2015-08-10       Impact factor: 3.467

2.  Differentially expressed microRNAs in the aqueous humor of patients with exfoliation glaucoma or primary open-angle glaucoma.

Authors:  Michelle D Drewry; Pratap Challa; John G Kuchtey; Iris Navarro; Inas Helwa; Yanzhong Hu; Hongmei Mu; W Daniel Stamer; Rachel W Kuchtey; Yutao Liu
Journal:  Hum Mol Genet       Date:  2018-04-01       Impact factor: 6.150

3.  Genetics, Diagnosis, and Monitoring of Pseudoexfoliation Glaucoma.

Authors:  Niraj Nathan; Rachel W Kuchtey
Journal:  Curr Ophthalmol Rep       Date:  2016-10-11

Review 4.  Genetics of glaucoma.

Authors:  Janey L Wiggs; Louis R Pasquale
Journal:  Hum Mol Genet       Date:  2017-08-01       Impact factor: 6.150

Review 5.  Is Autophagy Dysfunction a Key to Exfoliation Glaucoma?

Authors:  J Mario Wolosin; Robert Ritch; Audrey M Bernstein
Journal:  J Glaucoma       Date:  2018-03       Impact factor: 2.503

6.  Genome-wide association study identifies seven novel susceptibility loci for primary open-angle glaucoma.

Authors:  Yukihiro Shiga; Masato Akiyama; Koji M Nishiguchi; Kota Sato; Nobuhiro Shimozawa; Atsushi Takahashi; Yukihide Momozawa; Makoto Hirata; Koichi Matsuda; Taiki Yamaji; Motoki Iwasaki; Shoichiro Tsugane; Isao Oze; Haruo Mikami; Mariko Naito; Kenji Wakai; Munemitsu Yoshikawa; Masahiro Miyake; Kenji Yamashiro; Kenji Kashiwagi; Takeshi Iwata; Fumihiko Mabuchi; Mitsuko Takamoto; Mineo Ozaki; Kazuhide Kawase; Makoto Aihara; Makoto Araie; Tetsuya Yamamoto; Yoshiaki Kiuchi; Makoto Nakamura; Yasuhiro Ikeda; Koh-Hei Sonoda; Tatsuro Ishibashi; Koji Nitta; Aiko Iwase; Shiroaki Shirato; Yoshitaka Oka; Mamoru Satoh; Makoto Sasaki; Nobuo Fuse; Yoichi Suzuki; Ching-Yu Cheng; Chiea Chuen Khor; Mani Baskaran; Shamira Perera; Tin Aung; Eranga N Vithana; Jessica N Cooke Bailey; Jae H Kang; Louis R Pasquale; Jonathan L Haines; Janey L Wiggs; Kathryn P Burdon; Puya Gharahkhani; Alex W Hewitt; David A Mackey; Stuart MacGregor; Jamie E Craig; R Rand Allingham; Micheal Hauser; Adeyinka Ashaye; Donald L Budenz; Stephan Akafo; Susan E I Williams; Yoichiro Kamatani; Toru Nakazawa; Michiaki Kubo
Journal:  Hum Mol Genet       Date:  2018-04-15       Impact factor: 6.150

7.  Tank-Binding Kinase 1 (TBK1) Gene and Open-Angle Glaucomas (An American Ophthalmological Society Thesis).

Authors:  John H Fingert; Alan L Robin; Todd E Scheetz; Young H Kwon; Jeffrey M Liebmann; Robert Ritch; Wallace L M Alward
Journal:  Trans Am Ophthalmol Soc       Date:  2016-08

8.  De novo variants in an extracellular matrix protein coding gene, fibulin-5 (FBLN5) are associated with pseudoexfoliation.

Authors:  Biswajit Padhy; Ramani Shyam Kapuganti; Bushra Hayat; Pranjya Paramita Mohanty; Debasmita Pankaj Alone
Journal:  Eur J Hum Genet       Date:  2019-07-29       Impact factor: 4.246

Review 9.  Exfoliation Syndrome: A Disease of Autophagy and LOXL1 Proteopathy.

Authors:  Audrey M Bernstein; Robert Ritch; Jose M Wolosin
Journal:  J Glaucoma       Date:  2018-07       Impact factor: 2.503

Review 10.  Are we ready for genetic testing for primary open-angle glaucoma?

Authors:  Anthony P Khawaja; Ananth C Viswanathan
Journal:  Eye (Lond)       Date:  2018-01-30       Impact factor: 3.775

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