Literature DB >> 25705479

Crystal structure of 1-(4-meth-oxy-phen-yl)-4-(4-nitro-phen-yl)-3-phen-oxy-azetidin-2-one.

Sevim Türktekin Çelikesir1, Mehmet Akkurt1, Aliasghar Jarrahpour2, Habib Allah Shafie2, Ömer Çelik3.   

Abstract

In the title compound, C22H18N2O5, the central β-lactam ring (r.m.s. deviation = 0.002 Å) makes dihedral angles of 64.21 (14), 82.35 (12) and 20.66 (13)° with the phenyl ring and the nitro- and meth-oxy-benzene rings, respectively. The mol-ecular structure is stabilized by an intra-molecular C-H⋯O hydrogen bond. In the crystal, mol-ecules are linked via C-H⋯O hydrogen bonds, forming slabs lying parallel to (111). The slabs are linked via C-H⋯π inter-actions, forming a three-dimensional network.

Entities:  

Keywords:  C—H⋯O hydrogen bonds; C—H⋯π inter­actions; anti­biotics; crystal structure; four-membered monocyclic aza-heterocycles; phen­oxy­azetidin-2-one; β-lactam ring

Year:  2015        PMID: 25705479      PMCID: PMC4331848          DOI: 10.1107/S2056989014025833

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Related literature

For general properties and applications in medicinal chemistry of four-membered monocyclic aza-heterocycles, see: Bode et al. (1989 ▸); Gerona-Navarro et al. (2004 ▸); Grafe (1992 ▸); Gérard et al. (2004 ▸); Mehta et al. (2010 ▸); Setti et al. (2005 ▸); Singh et al. (2008 ▸); Southgate (1994 ▸); Sutton et al. (2004 ▸); Sperka et al. (2005 ▸). For related structures, see: Akkurt et al. (2011 ▸); Butcher et al. (2011 ▸).

Experimental

Crystal data

C22H18N2O5 M = 390.38 Triclinic, a = 9.8044 (3) Å b = 10.6483 (3) Å c = 11.1573 (3) Å α = 66.957 (1)° β = 70.105 (1)° γ = 65.973 (1)° V = 956.06 (5) Å3 Z = 2 Mo Kα radiation μ = 0.10 mm−1 T = 296 K 0.30 × 0.20 × 0.15 mm

Data collection

Bruker APEXII CCD diffractometer 16870 measured reflections 3586 independent reflections 2860 reflections with I > 2σ(I) R int = 0.027

Refinement

R[F 2 > 2σ(F 2)] = 0.046 wR(F 2) = 0.125 S = 1.09 3586 reflections 257 parameters H-atom parameters constrained Δρmax = 0.22 e Å−3 Δρmin = −0.17 e Å−3

Data collection: n class="Gene">APEX2 (Bruker, 2007 ▸); cell refinement: SAINT (Bruker, 2007 ▸); data reduction: SAINT; program(s) used to solve structure: SHELXS2014 (Sheldrick, 2008 ▸); program(s) used to refine structure: SHELXL2014 (Sheldrick, 2008 ▸); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▸); software used to prepare material for publication: PLATON (Spek, 2009 ▸). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S2056989014025833/su5026sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989014025833/su5026Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S2056989014025833/su5026Isup3.cml Click here for additional data file. . DOI: 10.1107/S2056989014025833/su5026fig1.tif Perspective view of the mol­ecular structure of the title compound, with atom labelling. Displacement ellipsoids are drawn at the 30% probability level. Click here for additional data file. a . DOI: 10.1107/S2056989014025833/su5026fig2.tif View of the hydrogen bonding and mol­ecular packing of the title compound along a axis (only H atoms involved in hydrogen bonding are shown; see Table 1 for details). CCDC reference: 1036033 Additional supporting information: crystallographic information; 3D view; checkCIF report
C22H18N2O5Z = 2
Mr = 390.38F(000) = 408
Triclinic, P1Dx = 1.356 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 9.8044 (3) ÅCell parameters from 8412 reflections
b = 10.6483 (3) Åθ = 2.2–31.2°
c = 11.1573 (3) ŵ = 0.10 mm1
α = 66.957 (1)°T = 296 K
β = 70.105 (1)°Prism, colourless
γ = 65.973 (1)°0.30 × 0.20 × 0.15 mm
V = 956.06 (5) Å3
Bruker APEXII CCD diffractometer2860 reflections with I > 2σ(I)
Radiation source: sealed tubeRint = 0.027
Graphite monochromatorθmax = 26.4°, θmin = 2.0°
φ and ω scansh = −12→12
16870 measured reflectionsk = −13→13
3586 independent reflectionsl = −13→13
Refinement on F20 restraints
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.046H-atom parameters constrained
wR(F2) = 0.125w = 1/[σ2(Fo2) + (0.054P)2 + 0.2069P] where P = (Fo2 + 2Fc2)/3
S = 1.09(Δ/σ)max < 0.001
3586 reflectionsΔρmax = 0.22 e Å3
257 parametersΔρmin = −0.17 e Å3
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement on F2 for ALL reflections except those flagged by the user for potential systematic errors. Weighted R-factors wR and all goodnesses of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The observed criterion of F2 > σ(F2) is used only for calculating -R-factor-obs etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.19496 (17)1.0034 (2)0.46300 (14)0.0891 (6)
O20.50869 (15)0.76274 (16)0.48302 (11)0.0619 (5)
O31.15569 (17)0.9287 (2)0.20735 (17)0.0938 (7)
O41.22134 (17)0.7927 (2)0.08655 (19)0.1013 (8)
O50.20258 (17)1.58682 (16)−0.07766 (16)0.0783 (6)
N10.38058 (14)1.03204 (17)0.26380 (13)0.0488 (5)
N21.12538 (18)0.86578 (19)0.15529 (16)0.0629 (6)
C10.3090 (2)0.9617 (2)0.38519 (16)0.0569 (5)
C20.42887 (19)0.8176 (2)0.37976 (16)0.0569 (5)
C30.50356 (17)0.90236 (19)0.23890 (14)0.0450 (5)
C40.6280 (2)0.6349 (2)0.48961 (17)0.0575 (7)
C50.7040 (3)0.5907 (3)0.5903 (2)0.0768 (9)
C60.8249 (3)0.4657 (3)0.6043 (3)0.0928 (10)
C70.8714 (3)0.3834 (3)0.5201 (3)0.0896 (10)
C80.7957 (3)0.4277 (3)0.4207 (2)0.0775 (8)
C90.6737 (2)0.5537 (2)0.40422 (19)0.0663 (7)
C100.66584 (17)0.89768 (17)0.21679 (14)0.0394 (5)
C110.70598 (18)0.95456 (19)0.28763 (15)0.0459 (5)
C120.85691 (19)0.94417 (19)0.26790 (15)0.0477 (5)
C130.96466 (17)0.87828 (18)0.17624 (15)0.0448 (5)
C140.92900 (19)0.82065 (19)0.10398 (16)0.0491 (5)
C150.77834 (18)0.83228 (18)0.12446 (15)0.0452 (5)
C160.33669 (17)1.1729 (2)0.17642 (16)0.0473 (6)
C170.1869 (2)1.2640 (2)0.1967 (2)0.0628 (7)
C180.1477 (2)1.4003 (2)0.1106 (2)0.0687 (8)
C190.2549 (2)1.4496 (2)0.0030 (2)0.0569 (7)
C200.4030 (2)1.3594 (2)−0.01778 (18)0.0540 (6)
C210.44279 (18)1.2218 (2)0.06850 (17)0.0505 (6)
C220.3131 (3)1.6499 (3)−0.1745 (3)0.0853 (10)
H20.388700.748900.376200.0680*
H30.491200.878200.167800.0540*
H50.673400.645400.648200.0920*
H60.876200.436200.672000.1120*
H70.953300.298600.530500.1070*
H80.826600.372500.363400.0930*
H90.623100.583200.336100.0800*
H110.631000.999900.348700.0550*
H120.884600.981100.315800.0570*
H141.004600.775300.043200.0590*
H150.751500.795700.075600.0540*
H170.113501.232600.268400.0750*
H180.047301.460600.124700.0820*
H200.476101.39090−0.089800.0650*
H210.542901.161200.053500.0610*
H22A0.381201.65160−0.130900.1280*
H22B0.262301.74640−0.222000.1280*
H22C0.370301.59430−0.236000.1280*
U11U22U33U12U13U23
O10.0574 (9)0.1347 (15)0.0630 (8)−0.0226 (9)0.0108 (7)−0.0452 (9)
O20.0622 (8)0.0815 (10)0.0467 (6)−0.0293 (8)−0.0155 (6)−0.0135 (6)
O30.0683 (10)0.1387 (16)0.1022 (11)−0.0573 (11)−0.0252 (8)−0.0319 (11)
O40.0394 (8)0.1325 (16)0.1246 (14)−0.0241 (10)0.0052 (9)−0.0532 (13)
O50.0615 (9)0.0556 (10)0.1099 (11)−0.0048 (8)−0.0253 (8)−0.0250 (8)
N10.0310 (7)0.0673 (11)0.0485 (7)−0.0124 (7)−0.0042 (5)−0.0244 (7)
N20.0428 (9)0.0751 (12)0.0627 (9)−0.0265 (9)−0.0142 (7)−0.0017 (8)
C10.0444 (7)0.0846 (10)0.0485 (6)−0.0267 (6)−0.0063 (5)−0.0231 (7)
C20.0444 (7)0.0846 (10)0.0485 (6)−0.0267 (6)−0.0063 (5)−0.0231 (7)
C30.0373 (8)0.0606 (12)0.0440 (8)−0.0166 (8)−0.0094 (6)−0.0207 (7)
C40.0511 (11)0.0701 (14)0.0490 (9)−0.0322 (11)−0.0124 (8)−0.0003 (9)
C50.0813 (15)0.0930 (18)0.0630 (11)−0.0416 (15)−0.0289 (11)−0.0038 (11)
C60.0886 (18)0.101 (2)0.0842 (16)−0.0368 (17)−0.0482 (14)0.0097 (15)
C70.0692 (15)0.0826 (18)0.0955 (17)−0.0272 (14)−0.0310 (13)0.0099 (14)
C80.0671 (14)0.0733 (16)0.0806 (14)−0.0245 (13)−0.0168 (11)−0.0079 (11)
C90.0632 (12)0.0766 (15)0.0600 (11)−0.0293 (12)−0.0187 (9)−0.0090 (10)
C100.0349 (8)0.0431 (10)0.0399 (7)−0.0114 (7)−0.0105 (6)−0.0109 (6)
C110.0400 (9)0.0550 (11)0.0461 (8)−0.0132 (8)−0.0083 (7)−0.0211 (7)
C120.0481 (9)0.0544 (11)0.0488 (8)−0.0215 (9)−0.0169 (7)−0.0123 (7)
C130.0349 (8)0.0463 (10)0.0471 (8)−0.0154 (8)−0.0127 (6)−0.0017 (7)
C140.0397 (9)0.0520 (11)0.0502 (8)−0.0119 (8)−0.0041 (7)−0.0170 (8)
C150.0420 (9)0.0516 (11)0.0470 (8)−0.0158 (8)−0.0082 (7)−0.0197 (7)
C160.0325 (8)0.0626 (12)0.0554 (9)−0.0097 (8)−0.0105 (7)−0.0308 (8)
C170.0358 (9)0.0778 (15)0.0706 (11)−0.0106 (10)−0.0028 (8)−0.0327 (11)
C180.0370 (10)0.0707 (15)0.0918 (14)0.0017 (10)−0.0103 (9)−0.0401 (12)
C190.0453 (10)0.0519 (13)0.0806 (12)−0.0058 (9)−0.0210 (9)−0.0303 (10)
C200.0401 (9)0.0593 (13)0.0666 (10)−0.0137 (9)−0.0116 (8)−0.0247 (9)
C210.0304 (8)0.0616 (13)0.0609 (9)−0.0083 (8)−0.0098 (7)−0.0261 (9)
C220.0902 (17)0.0591 (15)0.1103 (18)−0.0270 (13)−0.0321 (14)−0.0162 (13)
O1—C11.199 (3)C14—C151.376 (3)
O2—C21.413 (2)C16—C171.391 (3)
O2—C41.382 (3)C16—C211.379 (3)
O3—N21.208 (3)C17—C181.372 (3)
O4—N21.208 (3)C18—C191.385 (3)
O5—C191.372 (3)C19—C201.376 (3)
O5—C221.421 (4)C20—C211.383 (3)
N1—C11.369 (2)C2—H20.9800
N1—C31.468 (3)C3—H30.9800
N1—C161.414 (2)C5—H50.9300
N2—C131.469 (3)C6—H60.9300
C1—C21.515 (3)C7—H70.9300
C2—C31.570 (2)C8—H80.9300
C3—C101.508 (3)C9—H90.9300
C4—C51.382 (3)C11—H110.9300
C4—C91.377 (3)C12—H120.9300
C5—C61.371 (4)C14—H140.9300
C6—C71.373 (4)C15—H150.9300
C7—C81.367 (4)C17—H170.9300
C8—C91.384 (4)C18—H180.9300
C10—C111.388 (3)C20—H200.9300
C10—C151.388 (2)C21—H210.9300
C11—C121.384 (3)C22—H22A0.9600
C12—C131.370 (2)C22—H22B0.9600
C13—C141.379 (3)C22—H22C0.9600
C2—O2—C4118.48 (15)C18—C19—C20119.10 (19)
C19—O5—C22117.6 (2)C19—C20—C21119.87 (19)
C1—N1—C395.42 (14)C16—C21—C20121.16 (19)
C1—N1—C16133.12 (17)O2—C2—H2113.00
C3—N1—C16130.07 (13)C1—C2—H2113.00
O3—N2—O4123.0 (2)C3—C2—H2113.00
O3—N2—C13118.75 (18)N1—C3—H3111.00
O4—N2—C13118.26 (19)C2—C3—H3111.00
O1—C1—N1132.1 (2)C10—C3—H3111.00
O1—C1—C2135.63 (18)C4—C5—H5120.00
N1—C1—C292.29 (15)C6—C5—H5120.00
O2—C2—C1110.35 (15)C5—C6—H6119.00
O2—C2—C3117.28 (17)C7—C6—H6120.00
C1—C2—C385.76 (13)C6—C7—H7120.00
N1—C3—C286.47 (13)C8—C7—H7120.00
N1—C3—C10117.56 (16)C7—C8—H8120.00
C2—C3—C10117.93 (14)C9—C8—H8120.00
O2—C4—C5115.15 (19)C4—C9—H9120.00
O2—C4—C9124.79 (18)C8—C9—H9120.00
C5—C4—C9120.1 (2)C10—C11—H11120.00
C4—C5—C6119.5 (2)C12—C11—H11120.00
C5—C6—C7121.1 (3)C11—C12—H12121.00
C6—C7—C8119.2 (3)C13—C12—H12121.00
C7—C8—C9120.9 (2)C13—C14—H14121.00
C4—C9—C8119.3 (2)C15—C14—H14121.00
C3—C10—C11121.92 (15)C10—C15—H15119.00
C3—C10—C15118.78 (16)C14—C15—H15119.00
C11—C10—C15119.29 (18)C16—C17—H17120.00
C10—C11—C12120.36 (16)C18—C17—H17120.00
C11—C12—C13118.56 (17)C17—C18—H18119.00
N2—C13—C12118.97 (17)C19—C18—H18119.00
N2—C13—C14118.34 (16)C19—C20—H20120.00
C12—C13—C14122.69 (18)C21—C20—H20120.00
C13—C14—C15118.03 (17)C16—C21—H21119.00
C10—C15—C14121.06 (17)C20—C21—H21119.00
N1—C16—C17121.10 (16)O5—C22—H22A109.00
N1—C16—C21120.06 (18)O5—C22—H22B109.00
C17—C16—C21118.83 (18)O5—C22—H22C109.00
C16—C17—C18119.84 (19)H22A—C22—H22B109.00
C17—C18—C19121.2 (2)H22A—C22—H22C110.00
O5—C19—C18116.24 (19)H22B—C22—H22C109.00
O5—C19—C20124.65 (19)
C2—O2—C4—C5177.80 (19)C2—C3—C10—C15115.35 (17)
C4—O2—C2—C1−176.84 (16)N1—C3—C10—C1137.9 (2)
C4—O2—C2—C3−81.0 (2)C2—C3—C10—C11−63.5 (2)
C2—O2—C4—C9−1.7 (3)O2—C4—C5—C6−179.5 (2)
C22—O5—C19—C18169.3 (2)O2—C4—C9—C8179.7 (2)
C22—O5—C19—C20−12.1 (3)C9—C4—C5—C60.0 (4)
C16—N1—C1—C2169.0 (2)C5—C4—C9—C80.2 (3)
C3—N1—C1—O1−178.4 (2)C4—C5—C6—C7−0.2 (5)
C16—N1—C1—O1−11.3 (4)C5—C6—C7—C80.2 (5)
C1—N1—C16—C21170.0 (2)C6—C7—C8—C90.0 (5)
C16—N1—C3—C1070.7 (2)C7—C8—C9—C4−0.2 (4)
C3—N1—C16—C21−26.9 (3)C3—C10—C11—C12177.87 (15)
C16—N1—C3—C2−169.53 (19)C11—C10—C15—C141.2 (2)
C3—N1—C1—C21.90 (16)C15—C10—C11—C12−1.0 (2)
C1—N1—C3—C2−1.84 (15)C3—C10—C15—C14−177.68 (15)
C3—N1—C16—C17152.68 (19)C10—C11—C12—C130.7 (3)
C1—N1—C16—C17−10.4 (3)C11—C12—C13—C14−0.7 (3)
C1—N1—C3—C10−121.65 (15)C11—C12—C13—N2−179.56 (16)
O4—N2—C13—C14−7.7 (3)N2—C13—C14—C15179.77 (16)
O3—N2—C13—C14172.35 (18)C12—C13—C14—C150.9 (3)
O4—N2—C13—C12171.23 (18)C13—C14—C15—C10−1.2 (3)
O3—N2—C13—C12−8.8 (3)N1—C16—C21—C20−179.51 (18)
N1—C1—C2—O2115.78 (16)C17—C16—C21—C200.9 (3)
O1—C1—C2—C3178.6 (3)N1—C16—C17—C18179.76 (18)
N1—C1—C2—C3−1.78 (15)C21—C16—C17—C18−0.6 (3)
O1—C1—C2—O2−63.9 (3)C16—C17—C18—C190.0 (3)
O2—C2—C3—C1010.4 (2)C17—C18—C19—C200.4 (3)
O2—C2—C3—N1−109.09 (17)C17—C18—C19—O5179.1 (2)
C1—C2—C3—C10121.13 (17)O5—C19—C20—C21−178.7 (2)
C1—C2—C3—N11.66 (14)C18—C19—C20—C21−0.1 (3)
N1—C3—C10—C15−143.22 (15)C19—C20—C21—C16−0.5 (3)
D—H···AD—HH···AD···AD—H···A
C17—H17···O10.932.603.172 (3)120
C12—H12···O1i0.932.373.103 (2)135
C21—H21···O4ii0.932.433.127 (3)132
C15—H15···Cg4iii0.932.753.674 (2)173
Table 1

Hydrogen-bond geometry (, )

Cg4 is the centroid of the methoxyphenyl ring (C16C21).

DHA DHHA D A DHA
C17H17O10.932.603.172(3)120
C12H12O1i 0.932.373.103(2)135
C21H21O4ii 0.932.433.127(3)132
C15H15Cg4iii 0.932.753.674(2)173

Symmetry codes: (i) ; (ii) ; (iii) .

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Authors:  Ray J Butcher; Mehmet Akkurt; Aliasghar Jarrahpour; Seid Ali Torabi Badrabady
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-04-13

9.  1-(4-Meth-oxy-phen-yl)-4-(4-methyl-phen-yl)-3-phen-oxy-azetidin-2-one.

Authors:  Mehmet Akkurt; Yılmaz Dağdemir; Aliasghar Jarrahpour; Maryam Rostami; Orhan Büyükgüngör
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-01-12

10.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  10 in total

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