Quentin Michaudel1, Yoshihiro Ishihara1, Phil S Baran1. 1. Department of Chemistry, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, California 92037, United States.
Abstract
Collaboration between academia and industry is a growing phenomenon within the chemistry community. These sectors have long held strong ties since academia traditionally trains the future scientists of the corporate world, but the recent drastic decrease of public funding is motivating the academic world to seek more private grants. This concept of industrial "sponsoring" is not new, and in the past, some companies granted substantial amounts of money per annum to various academic institutions in exchange for prime access to all their scientific discoveries and inventions. However, academic and industrial interests were not always aligned, and therefore the investment has become increasingly difficult to justify from industry's point of view. With fluctuating macroeconomic factors, this type of unrestricted grant has become more rare and has been largely replaced by smaller and more focused partnerships. In our view, forging a partnership with industry can be a golden opportunity for both parties and can represent a true symbiosis. This type of project-specific collaboration is engendered by industry's desire to access very specific academic expertise that is required for the development of new technologies at the forefront of science. Since financial pressures do not allow companies to spend the time to acquire this expertise and even less to explore fundamental research, partnering with an academic laboratory whose research is related to the problem gives them a viable alternative. From an academic standpoint, it represents the perfect occasion to apply "pure science" research concepts to solve problems that benefit humanity. Moreover, it offers a unique opportunity for students to face challenges from the "real world" at an early stage of their career. Although not every problem in industry can be solved by research developments in academia, we argue that there is significant scientific overlap between these two seemingly disparate groups, thereby presenting an opportunity for a symbiosis. This type of partnership is challenging but can be a win-win situation if both parties agree on some general guidelines, including clearly defined goals and deliverables, biweekly meetings to track research progress, and quarterly or annual meetings to recognize overarching, common objectives. This Account summarizes our personal experience concerning collaborations with various industrial groups and the way it impacted the research programs for both sides in a symbiotic fashion.
Collaboration between academia and industry is a growing phenomenon within the chemistry community. These sectors have long held strong ties since academia traditionally trains the future scientists of the corporate world, but the recent drastic decrease of public funding is motivating the academic world to seek more private grants. This concept of industrial "sponsoring" is not new, and in the past, some companies granted substantial amounts of money per annum to various academic institutions in exchange for prime access to all their scientific discoveries and inventions. However, academic and industrial interests were not always aligned, and therefore the investment has become increasingly difficult to justify from industry's point of view. With fluctuating macroeconomic factors, this type of unrestricted grant has become more rare and has been largely replaced by smaller and more focused partnerships. In our view, forging a partnership with industry can be a golden opportunity for both parties and can represent a true symbiosis. This type of project-specific collaboration is engendered by industry's desire to access very specific academic expertise that is required for the development of new technologies at the forefront of science. Since financial pressures do not allow companies to spend the time to acquire this expertise and even less to explore fundamental research, partnering with an academic laboratory whose research is related to the problem gives them a viable alternative. From an academic standpoint, it represents the perfect occasion to apply "pure science" research concepts to solve problems that benefit humanity. Moreover, it offers a unique opportunity for students to face challenges from the "real world" at an early stage of their career. Although not every problem in industry can be solved by research developments in academia, we argue that there is significant scientific overlap between these two seemingly disparate groups, thereby presenting an opportunity for a symbiosis. This type of partnership is challenging but can be a win-win situation if both parties agree on some general guidelines, including clearly defined goals and deliverables, biweekly meetings to track research progress, and quarterly or annual meetings to recognize overarching, common objectives. This Account summarizes our personal experience concerning collaborations with various industrial groups and the way it impacted the research programs for both sides in a symbiotic fashion.
Collaboration between academia and industry
has recently been a
topic of interest and discussion across various fields of science
in journal publications[1,2] and newsletters.[3] Its importance is widely recognized and even promoted by
public funding agencies such as the National Institutes of Health,[4] the National Science Foundation,[5] and Marie Curie Actions in Europe.[6] However, the concept of collaboration between academia and industry
is not new, and the recognition that there is a difficulty to translate
academic research findings into commercial products of public interest
is also not new. This recent resurgence of academia–industry
collaborations is spurred by financial pressures, as both parties
reach out to each other in order to render their practice of research
and development more time- and cost-efficient. On the one hand, academia,
which traditionally studies “pure science”, is leaning
more toward “applied science” because public funding
agencies can no longer justify spending taxpayers’ money for
basic science endeavors alone. On the other hand, industry, which
traditionally studies “applied science”, is turning
more toward “pure science” to generate creative solutions
for the exploration of new chemical space amid a very crowded intellectual
property (IP) landscape. In previous models of academia–industry
collaborations, industry paid for all of academia’s findings
and then selected the technologies that they deemed most useful for
their purposes (i.e., blanket agreements and first-rights deals).
Now, it is becoming increasingly popular for industry to pay for the
academic technology that is developed specifically for their intended
purpose (i.e., sponsor-funded programs).Some recent examples
of partnerships from other groups include
the collaboration of the Buchwald group and Merck for the development
of palladium precatalysts,[7] the Molander
group and Janssen Pharmaceuticals for the development of alkyltrifluoroborate
reagents,[8] the Beller group and Evonik
Industries for the development of alkane dehydrogenation catalysts,[9] the Chirik group and Merck for the development
of cobalt catalysts for asymmetric hydrogenation,[10] the Doyle group and AstraZeneca for mechanistic investigations
of palladium-catalyzed reactions,[11] and
the Hawker group and Dow Chemical for the fabrication of polymer brush
nanostructures via light-mediated iridium catalysis.[12] Other multigroup, multiproject collaborations exist across
various fields of chemistry.[13] Our laboratory
has particularly benefitted from collaborations with industrial partners,
from which over a dozen fruitful projects have materialized. In this
Account, we describe a series of vignettes to identify numerous elements
that support a symbiotic project. Furthermore, we recount how our
own research program has been shaped and influenced by our industrial
colleagues.
Discussion
Genentech
In 2009, a collaboration
was forged with
Genentech to study the bioactivity of haouamine A (2;
Figure 1).[14] Despite
some initial reports of interesting in vitro cytotoxicity,
an in-depth biological study of 2 could not be undertaken
by Genentech, since isolation from marine tunicates does not afford
enough natural sample. Although our laboratory had previously completed
the total synthesis of haouamine A (2),[15] the synthetic route was not amenable to large-scale synthesis,
and therefore, prompted by Rami Hannoush at Genentech, the sequence
was revised. Since we strive to achieve an “ideal” synthesis
whenever possible,[16] the development of
a scalable synthesis of this complex heptacyclic alkaloid was an academic
goal that became aligned with an industrial purpose. Thus, our laboratory
embarked on a third-generation synthesis of 2, which
began by the preparation of over 15 g of intermediate 1 in eight steps.[14] Then, a point-to-planar
chirality transfer strategy was designed for the end-game, enabling
the preparation of ample quantities of 2 and its atropisomer 3. With this newly available supply of haouamine A (2), Genentech was able to show that both 2 and 3 are active against PC3humanprostate cancer cells (IC50 = 29 ± 2 μM for 2 and IC50 = 32 ± 3 μM for 3) and that the cyclophane
moiety is required for bioactivity.
Figure 1
Development of a scalable route to haouamine
A (2)
for bioactivity testing at Genentech.
Development of a scalable route to haouamine
A (2)
for bioactivity testing at Genentech.
LEO Pharma
In 2011, we embarked on an ambitious multiyear
partnership with LEO Pharma to develop practical syntheses of complex
natural products for the treatment of skin diseases.[17] The overall objective has been to apply in-house chemistry
methodologies and synthesis strategies to prepare novel synthetic
intermediates and analogs for biological evaluation against LEO Pharma
targets. In particular, LEO Pharma has been pursuing complex natural
terpenes of biological significance, which fortuitously has been our
own area of expertise over the past decade.[18] The cornerstone of our association with LEO Pharma was the diterpene
ingenol (6; Figure 2).[19] An esterified version of 6, ingenol
mebutate (or ingenol-3-angelate; 7), belongs to the LEO
Pharma portfolio and is commercialized under the trade name Picato
for the treatment of actinic keratosis. Biological studies showed
that the C3 hydroxyl group has to be functionalized to ensure potency.[20] However, in solution, ingenol mebutate (7) undergoes rapid hydrolysis or transesterification due to
the hydroxy triad (C3, C4, and C5), which limits its current use to
epidermal application as a gel. The development of a total synthesis
of ingenol (6) and various analogs could thus enable
a better understanding of the structure–activity relationship
of ingenanes and also enable the potential identification of an orally
stable derivative that cannot be accessed from 6. From
an academic perspective, ingenol (6) presents a great
synthetic challenge due to its highly strained in,out-[4.4.1]bicycloundecane core. While the previous
syntheses showcase incredibly elegant transformations, all routes
are over 35 steps, thus calling for the design of a shorter and more
scalable route. LEO Pharma only had experience in working with contract
research organizations at the time, so they took a big leap of faith
when they decided to partner with an academic group. Indeed, they
had no guarantees that we could deliver a concise and practical synthesis
of ingenol (6) in a reasonable time scale. As it turned
out, a two-phase terpene synthesis logic[21] facilitated our task of constructing the terpene core, and we were
able to synthesize our “cyclase phase end point”, tigliane
intermediate 5, in seven steps and in gram scale from
(+)-carene (4).[19] Successful
implementation of a biomimetic pinacol shift and regioselective oxidations
delivered ingenol (6) in seven more steps. This scalable
total synthesis has since enabled the preparation of various analogs
that will allow for a better understanding of the mechanism of action
of this “first-in-class” drug. Through biweekly teleconferences
and frequent email exchanges, the team at LEO pharma led by Jakob
Felding has continuously supported and guided the synthesis strategies,
and further provided critical advice for the types of structures that
would be beneficial for analog synthesis. Notably, the Scripps–LEO
route to ingenol (6) and related analogs is the subject
of two separate patent filings.
Figure 2
Inception of a symbiotic relationship
with LEO Pharma through ingenol
synthesis.
Inception of a symbiotic relationship
with LEO Pharma through ingenol
synthesis.While the quest for ingenol was
the linchpin of our partnership
with LEO Pharma, other synergetic interests appeared along the way
and transformed it into a lasting relationship. The synthesis of natural
products and related analogs in the bioactive sesquiterpene[22] and meroterpene[23,24] families has
allowed us to showcase several synthesis strategies in complex molecule
settings all the while providing LEO Pharma a library of unique structural
frameworks for medicinal chemistry endeavors (Figure 3).
Figure 3
Divergent synthesis of bioactive terpene families.
Divergent synthesis of bioactive terpene families.Keeping with the theme of complex terpene synthesis,
we reported
the synthesis of ouabagenin (16), a polyhydroxylated
steroid (Figure 4).[25] Ouabagenin (16) belongs to the class of cardenolides,
and its parent glycoside, ouabain, is used as a treatment for congestive
heart failure but suffers from a very narrow therapeutic index. The
preparation of analogs could solve this longstanding industrial problem;
however, the only previous synthesis of ouabain required a lengthy
41 steps.[26] Consequently, academic and
industrial interests met in this daunting task: a scalable synthesis
of a molecule as complex as ouabagenin (16) was needed.
We decided on a quasi-biomimetic approach starting with the inexpensive
adrenosterone and exploiting the oxidation at C11 to install oxidation
at C19 and then, C5 and C1. This “redox relay” strategy
enabled the preparation of over half a gram of protected ouabageninone
(14) in 14 steps. This intermediate is currently serving
as a platform to access various analogs such as C14-fluorinated 15, derivatives of which are being tested by LEO Pharma. The
importance of the C19-hydroxyl group for the bioactivity of ouabain
and other steroidal compounds was demonstrated by LEO Pharma scientists,
Georg Dünstl and Jakob Felding,[27] and is currently the subject of a separate patent filing. Finally,
to complete our initial objective, ouabagenin (16) was
prepared in six steps from 14.
Figure 4
Synthesis of a polyhydroxylated
cardenolide, ouabagenin (16), and analogs thereof.
Synthesis of a polyhydroxylated
cardenolide, ouabagenin (16), and analogs thereof.
Bristol-Myers Squibb
In 2012, The Scripps Research
Institute (TSRI) and Bristol-Myers Squibb (BMS) entered a long-term
multilaboratory partnership centered on projects of mutual interest.[28] This sponsor-funded program enables the application
of TSRI’s scientific know-how to the development of therapeutics
against diseases of interest at BMS. Since both medicinal and process
chemistry groups were involved from BMS, the types of projects that
we undertook are varied in nature. Natural product synthesis and modification,
as well as method development, are all part of this collaboration
portfolio. What follows are examples of completed projects that span
many areas of interest in medicinal and process chemistry.Betulin
(17) and betulinic acid (18), two pentacyclictriterpenes of the lupane family, were at the heart of the first joint
effort between our laboratory and BMS medicinal chemistry (Figure 5).[29] These two natural
products that only differ by the oxidation at C28 present very interesting in vitro bioactivities. Betulinic acid (18)
especially shows promising potency as an anti-inflammatory, anticancer,
and anti-HIV agent. Unfortunately, any potential therapeutic application
would be hampered by their scarce solubility in aqueous media. One
solution to render 17 and 18 more soluble
in water is to adorn their skeleton with heteroatoms. This problem
appeared to us as an unparalleled opportunity to test some C–H
oxidation methodologies on highly complex substrates. A dual chemical
and enzymatic approach afforded eight oxidized betulin derivatives
(some of which are natural products themselves), which were used for
solubility assays. These assays were conducted by BMS, revealing a
drastic increase of solubility for some compounds compared with 17 or 18. This study demonstrates the power of
C–H oxidation in the field of drug discovery as a tool to improve
not only the potency of a pharmaceutical lead but also its physicochemical
properties. Furthermore, this work would not have been possible without
a constant exchange of data and molecules between our laboratory and
several groups at BMS, and Alicia Regueiro-Ren was instrumental in
orchestrating this multifaceted research. Unpublished analogs arising
from the developed C–H oxidation reactions will be patented
by BMS in the near future.
Figure 5
Beginning of a symbiotic relationship with BMS:
performing C–H
oxidation reactions on the biologically active framework of betulin
(17) and betulinic acid (18) to enhance
solubility profiles.
Beginning of a symbiotic relationship with BMS:
performing C–H
oxidation reactions on the biologically active framework of betulin
(17) and betulinic acid (18) to enhance
solubility profiles.Academia–industry partnerships are not limited to
medicinal
chemistry research and can be beneficial at any stage of drug development.
Thus, we joined forces with the process department at BMS to develop
a new regioselective bromination of heteroarenes (Figure 6).[30] A plethora of bioactive
compounds possess C2-substituted heteroarenes, which are traditionally
synthesized by cross-coupling reactions. Hence, C2 halogenation of
heteroarenes is often a requisite step in drug synthesis. While chlorination
methodology is abundant, regioselective bromination reactions proceeding
under mild conditions are scarce. Building upon previous BMS findings
made by Martin Eastgate and Ke Chen,[31] it
was found that Ts2O and nBu4NBr results
in a mild bromination that can be applied to a wide array of fused
pyridine N-oxides (21). This new reaction
is currently being applied to prepare kilogram quantities of a drug
candidate at BMS.
Figure 6
Extending BMS process chemistry findings to fill a methodology
gap in heteroarene bromination.
Extending BMS process chemistry findings to fill a methodology
gap in heteroarene bromination.Due to the cornucopia of nitrogenous heterocycles in drug
discovery,
functionalization of heteroarenes is of primordial importance for
the pharmaceutical industry. Radical C–H functionalization
of heterocycles has been a longstanding area of research in our laboratory
that resulted in collaborations with various pharmaceutical groups
(vide infra). Among these desired transformations,
an innate C–H amination of heteroarenes was highly sought.
We aimed to develop a stable reagent that could generate an N-centered
radical, which adds into arenes to make aminated or imidated products
under mild conditions (Figure 7).[32] After much exploration and optimization, N-succinimidyl perester (NSP) was found to generate an imidyl
radical in situ, which then adds to (hetero)arenes
to give imidated products. An essential component of the development
of this work, which spanned over a year and a half, was the critical
insight and careful suggestions from Martin Eastgate at BMS. On many
occasions, this project was very close to being abandoned, but it
was the patience and optimism from our BMS colleague that paved the
way to fruition.
Figure 7
Radical C–H amination of (hetero)arenes and new
reagent
development.
Radical C–H amination of (hetero)arenes and new
reagent
development.Continuing with the theme
of heteroarene functionalization, a chlorination
method was then sought. Although chlorination of (hetero)aromatic
compounds is a very well-known process, the “go-to”
reagent, N-chlorosuccinimide (NCS), is not always
sufficient in terms of reactivity. Pharmaceutical companies are therefore
interested in alternative (hetero)arene chlorination strategies. For
example, BMS had a few scaffolds for which NCS was sluggish but for
which SO2Cl2 or Cl2 was excessively
reactive. Based on a curious finding during the synthesis of pyrrole-imidazole
alkaloids,[33] a guanidine-based chlorinating
reagent was invented (Figure 8).[34] This reagent was named CBMG, or more affectionately
Palau’chlor (which is based on the name of the iconic pyrrole-imidazole
natural product, palau’amine). Aided by the process chemistry
expertise of BMS, we were able to assess the stability of this reagent
and safety of its use in large-scale procedures. Thanks to the distribution
capacity of Sigma-Aldrich (vide infra), Palau’chlor
is already being used in drug discovery programs at BMS and in many
other pharmaceutical companies.
Figure 8
Revisiting the old problem of aromatic
chlorination with a new
chlorinating agent, Palau’chlor.
Revisiting the old problem of aromatic
chlorination with a new
chlorinating agent, Palau’chlor.
Pfizer
Pfizer is a prime example depicting a paradigm
shift in academia–industry collaborations that has been witnessed
over the past decade. From 2007 to 2011, TSRI and Pfizer had been
in a 5-year research collaboration wherein Pfizer had the first right
to partner with TSRI on some fraction of projects (a “first-rights
deal”) in exchange for payments over the 5-year period.[35] After this collaboration ended, Pfizer re-entered
into a more focused partnership with selected individual laboratories,
including our group. In this symbiosis, we gained access to compounds
in confidential projects at Pfizer for internal scientific use. In
return, unpublished results were shared with Pfizer scientists for
incorporation into their research programs. Numerous projects have
been completed together resulting in many joint publications, which
will be discussed below.In 2011, our laboratory reported a
method for heteroarene trifluoromethylation in which CF3–SO2Na (Langlois reagent) was used under oxidative
conditions to react with heteroarene C–H bonds.[36] Building on this work, we surmised that heteroarene
difluoromethylation could be of interest in medicinal chemistry for
isostere-based drug design (Figure 9).[37] Although we had originally aimed to make the
analogous CF2H–SO2Na, the synthesis of
this reagent was not possible, and instead, it was found that zinc
difluoromethanesulfinate (DFMS) could be prepared as a crystalline
compound that reacts readily with heteroarene C–H bonds at
room temperature. Michael Collins at Pfizer has been our industrial
colleague ever since the initiation of this joint work, providing
us with the valuable perspective of a practicing medicinal chemist.
Aided by Pfizer La Jolla’s close relationship with our laboratory,
both figuratively and geographically, our groups have been able to
meet in person every few weeks to exchange ideas as well as chemical
compounds. Finally, as described at the end of this Account, DFMS
catalyzed the beginning of our relationship with Sigma-Aldrich, which
spurred a partnership in 2013 involving multiple investigators at
TSRI.
Figure 9
Establishment of a symbiotic relationship with Pfizer that led
to the creation of a mild, rapid, and practical way to difluoromethylate
(hetero)arenes.
Establishment of a symbiotic relationship with Pfizer that led
to the creation of a mild, rapid, and practical way to difluoromethylate
(hetero)arenes.Based on the rapid widespread
use of DFMS in both academia and
industry, a series of zinc bis(alkanesulfinate) reagents were designed
(Figure 10).[38,39] Zinc trifluoromethanesulfinate
(TFMS) was found to be superior to the sodium version in both reactivity
and efficiency. Other zinc bis(alkanesulfinate) reagents that contain
trifluoroethyl, monofluoromethyl, isopropyl,tri(ethylene glycol),
monochloromethyl, (methoxycarbonyl)methyl, cyclohexyl, and perfluorohexyl
groups were also synthesized. This expansion of the types of (fluoro)alkyl
groups that can be appended onto heteroarenes not only provided us
a better understanding of sulfinate radical chemistry but also served
to diversify numerous small molecules for Pfizer’s drug discovery
programs. Furthermore, a method of alkanesulfinate activation that
is complementary to tBuOOH oxidation was developed, resulting
in an electrochemistry-enabled procedure for large-scale reactions.[40]
Figure 10
Expansion of the scope of the (fluoro)alkylating agent
to generate
a suite of diversifying reagents for medicinal chemistry.
Expansion of the scope of the (fluoro)alkylating agent
to generate
a suite of diversifying reagents for medicinal chemistry.In 2013, we had read with great interest a review
titled “Profound
Methyl Effects in Drug Discovery and a Call for New C–H Methylation
Reactions”.[41] Although heteroarene
methylation was already an objective of ours, this review gave us
renewed motivation to expand the sulfinate radical method for methylation
(Figure 11).[42] Meanwhile,
Pfizer chemists (now consisting of Michael Collins, Aaron Burns, and
Martha Ornelas) wanted to respond to the “call for new C–H
methylation reactions” but in a way that guarantees ease of
product purification, knowing that it is notoriously difficult to
separate the product from starting material in methylation reactions.
To this end, we jointly invented a two-step methylation method, wherein
a new reagent, zinc (phenylsulfonyl)methanesulfinate (PSMS), allowed
for the appendage of a −CH2SO2Ph group
onto heteroarenes. The formed intermediate is much more polar than
the heteroarene starting material (and often crystalline), and therefore
the purification process is extremely simple even in the event of
incomplete conversion. This intermediate can then be desulfonylated
under three orthogonal reaction conditions, allowing for functional
group compatibility when necessary. This strategy has been field-tested
using building blocks in a current Pfizer program and continues to
be used for heteroarene functionalization and divergent synthesis.
Figure 11
Responding
to the pharmaceutical industry’s “call
for new C–H methylation reactions”.
Responding
to the pharmaceutical industry’s “call
for new C–H methylation reactions”.Another article in 2013, titled “Metabolically Stable tert-Butyl Replacement”, made it clear to the chemistry
community that trifluoromethylcyclopropylation is a much-needed reaction
for bioisostere-based drug discovery.[43] Both our group and Pfizer aimed to find a simple way to introduce
this trifluoromethylcyclopropyl unit, and the logical flow of our
research program identified the requirement of synthesizing trifluoromethylcyclopropylsulfinate
(Figure 12).[44] At
this point, we had been making an assortment of alkanesulfinate reagents
from alkanesulfonyl chlorides,[37−39] alkyl halides,[38,42] and difluoromethyl 2-pyridyl sulfone,[45] but none of these methods could be applied to trifluoromethylcyclopropanecarboxylic
acid (30), the only source of commercially available
trifluoromethylcyclopropane. A solution to this challenge was found
by exploiting the Barton decarboxylation reaction, where an interrupted
version of this classic transformation was the key to success.[44] While the academic focus was primarily to convert
inexpensive carboxylic acids into valuable alkanesulfinate reagents,
our industrial collaborators were able to pinpoint scaffolds that
would make a great impact in medicinal chemistry. The utility of the
resulting reagents, including sodium trifluoromethylcyclopropylsulfinate
(TFCS-Na), has been demonstrated at Pfizer and is expected to be widespread
in other pharmaceutical companies.
Figure 12
Responding to the pharmaceutical industry’s
need for a convenient
access to trifluoromethylcyclopropanated (hetero)arenes.
Responding to the pharmaceutical industry’s
need for a convenient
access to trifluoromethylcyclopropanated (hetero)arenes.Our industrial partners can often identify “real-world”
problems better than we can, owing to their years of experience in
multidisciplinary research targeting diseases. A fitting example is
the challenge associated with preventing or reducing aldehyde oxidase
(AO)-mediated metabolism. Building upon previous work by Pfizer,[46] our Pfizer colleagues had hoped to find a practical
method for the chemical prediction and prevention of AO metabolism
by blocking specific sites of a lead compound. Since electron-deficient
heteroarenes are often substrates toward AO metabolism, which is similar
to the trend for the sulfinate reagent DFMS, we conjectured that DFMS
could be a potential candidate for AO prediction (Figure 13).[47] As a result, DFMS
suitably reacts with heteroaromatic scaffolds that are vulnerable
to AO metabolism and can often block the exact site of AO metabolism.
Furthermore, efficient reaction at room temperature (within 2 h) and
simple recognition of a difluoromethylated product peak at M + 50
by LCMS analysis allow for a convenient “litmus test”
for routine use in drug discovery.
Figure 13
Merging interests with Pfizer’s
aldehyde oxidase (AO) metabolism
program: the utilization of zinc difluoromethanesulfinate (DFMS) as
a litmus test.
Merging interests with Pfizer’s
aldehyde oxidase (AO) metabolism
program: the utilization of zinc difluoromethanesulfinate (DFMS) as
a litmus test.
Morphotek/Eisai
Another symbiotic relationship can
be witnessed in a project developed with Morphotek (a subsidiary of
Eisai). A major commitment of Morphotek is to develop antibody–drug
conjugate (ADC) platforms for oncology, and they were interested in
expanding the scope of drugs that can be attached to monoclonal antibodies.
Their objective was thus in line with our goal of expanding the scope
of substrates that can be reacted with difluoroalkyl-containing sulfinate
reagents.[45] With the sulfinate radical
chemistry, we were confident that we would be able to tag traditionally
“untaggable” substrates that only contain C–H
bonds. To this end, (difluoroalkylazido)sulfinate (DAAS-Na), a reagent
containing a difluoromethanesulfinate unit as well as an azido terminus,
was developed (Figure 14).[48] Bioactive natural products as well as synthetic drugs were
tested for reaction with DAAS-Na, and upon successful tagging, the
azide unit was engaged in a “click” reaction with an
antibody containing an alkyne-capped linker. The resulting ADC demonstrates
great potential for labeling and bioconjugation of pharmaceutically
relevant scaffolds that do not present conventional functional groups.
Figure 14
Initiating
a symbiosis with Eisai/Morphotek to achieve “native
chemical tagging”.
Initiating
a symbiosis with Eisai/Morphotek to achieve “native
chemical tagging”.
Sigma-Aldrich
One final industry partner that has been
a significant presence throughout all the projects described above
is Sigma-Aldrich, a leading supplier of chemical reagents and products.
Since Sigma-Aldrich is not a pharmaceutical company, the academia–industry
relationship in this example differs from the rest. Ever since we
became engaged in methodology development, we have believed that the
best way to disseminate our scientific findings for widespread use
is to commercialize the newly invented reagents through a purveyor
of chemical reagents with a global presence. In particular, our colleagues
in industry, whose stringent time constraints preclude them from making
most reagents in-house, only incorporate new methodology into their
research programs if these new reagents are readily accessible. From
the Sigma-Aldrich standpoint, if they are the first supplier to add
these new reagents to their portfolio, it will expand their market
share. This would concomitantly expedite cutting-edge research, which
would ultimately lead to increased sales. The multi-investigator partnership
between TSRI and Sigma-Aldrich began in 2013, after the invention
of the first sulfinate reagents. Two reagents in particular, DFMS
and TFMS, spawned this partnership due to their immediate sales following
publication, which surpassed the $100,000 mark in less than 18 months.
Following this model, TSRI and Sigma-Aldrich began a symbiotic relationship
with the main objective of reducing the delay between the invention
of novel reagents and their commercialization.[49] In order to achieve this goal, unpublished work that can
lead to the development of a new reagent is communicated with Sigma-Aldrich
on a biweekly basis, and in return, Sigma-Aldrich provides the necessary
chemicals that constitute these new reagents and expedites the commercialization
process. As a result, dozens of reagents developed in our laboratory
have been made commercially available, with a selected set depicted
in Figure 15.[32,34,37,38,42,44,45,48,50,51]
Figure 15
Instituting an unprecedented symbiosis of an academic
group with
a reagent company to generate a series of new reagents for widespread
benefit.
Instituting an unprecedented symbiosis of an academic
group with
a reagent company to generate a series of new reagents for widespread
benefit.
Conclusion
As
exemplified throughout the vignettes of this Account, true symbiotic
relationships between academia and industry can be achieved and be
beneficial for both parties. They led us to develop many new reagents
and new reactions, as well as a number of total syntheses and derivatizations
of complex molecules. On the industrial side, the results of these
partnerships have impacted every step of the drug discovery process,
from the synthesis of a few milligrams of potential therapeutic leads
to the improvement of kilogram-scale preparations of drug candidates.
Commercialization of our new reagents through Sigma-Aldrich will hopefully
serve both the academic and industrial worlds. Moreover, establishing
partnerships with various companies has shaped general expectations
for the roles of both parties in such a relationship (Table 1). This type of symbiosis generally starts from
industry’s identification of “real-world” problems
meeting academia’s capacity to deliver out-of-the-box solutions.
Academia needs to provide specialized scientific education to the
students, which can be complemented by industry’s multidisciplinary
expertise. Transparent communication between both groups is required
through progress reports and (telephone) conferences, and an agreement
must be reached regarding intellectual properties and deadlines. Finally,
both sides must be driven by the will to discover new science. While
we recognize that not all projects are suited for a symbiotic partnership,
we believe that many can be tailored such that mutual success can
be achieved. We hope that this kind of symbiotic relationship will
complement the existing models of funding and that the present Account
will stimulate the launch of more fruitful partnerships between academia
and industry.[52]
Table 1
General
Expectations in a Fruitful
Academia–Industry Symbiosis
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