| Literature DB >> 25682870 |
David M Hyman1,2, Anne A Eaton3, Mrinal M Gounder1,2, Erika G Pamer1, Jasmine Pettiford1, Richard D Carvajal1,2, S Percy Ivy4, Alexia Iasonos3,2, David R Spriggs1,2.
Abstract
PURPOSE: Patients who do not complete one cycle of therapy on Phase I trials for reasons other than dose limiting toxicity (DLT) are considered inevaluable for toxicity and must be replaced.Entities:
Keywords: Phase I trials; drug development; early discontinuation
Mesh:
Year: 2015 PMID: 25682870 PMCID: PMC4662493 DOI: 10.18632/oncotarget.2909
Source DB: PubMed Journal: Oncotarget ISSN: 1949-2553
Patient characteristics, derivation set (N = 3079)
| Characteristic | No. | % |
|---|---|---|
| 58 (median) | 18–87 (range) | |
| Male | 1528 | 50% |
| Female | 1551 | 50% |
| Gastrointestinal | 1060 | 34% |
| Genitourinary | 371 | 12% |
| Thoracic | 366 | 12% |
| Breast | 349 | 11% |
| Gynecologic | 291 | 9% |
| Sarcoma | 242 | 8% |
| Head and Neck | 197 | 6% |
| Melanoma and Skin | 162 | 5% |
| Brain and Unknown | 41 | 1% |
| 0 | 885 | 29% |
| 1 | 2040 | 66% |
| ≥ 2 | 154 | 5% |
| 0–2 | 1374 | 45% |
| 3 | 555 | 18% |
| ≥ 4 | 1150 | 37% |
| Yes | 1433 | 47% |
| No | 1641 | 53% |
| 0 | 145 | 5% |
| 1 | 525 | 18% |
| 2 | 590 | 21% |
| > 2 | 1588 | 56% |
| Lung | 1101 | 39% |
| Liver | 1081 | 38% |
| Lymph Node | 609 | 21% |
| Bone | 216 | 8% |
| Brain | 8 | 0% |
| 8.1 (median) | 0 – 49.5 (range) | |
| < 18.5 | 101 | 3% |
| ≥ 18.5 | 2961 | 97% |
| WBC (109/L) ≥ 10.5 (2 missing) | 329 | 11% |
| ALC (109/L) < 0.5 (77 missing) | 187 | 6% |
| Hemoglobin (g/dL) < 10 | 273 | 9% |
| Platelets (109/L) ≥ 400 | 405 | 13% |
| Platelets (109/L) < 150 | 230 | 7% |
| Albumin (g/dL) < 3.5 | 802 | 26% |
| AST (units/L) > ULN | 788 | 26% |
| ALT (units/L) > ULN (92 missing) | 588 | 17% |
| Total bilirubin (mg/dL) > 1 (8 missing) | 151 | 5% |
| Alkaline Phosphatase (units/L) > 2.5xULN | 355 | 12% |
| Creatinine clearance(mL/min)2 < 60 | 380 | 12% |
| Yes | 208 | 7% |
| No | 2871 | 93% |
Patients may fall into more than one category for these covariates.
Estimated by Cockcroft-Gault equation, capped at 125 mL/min.
Some patients were missing this covariate and were excluded.
Univariate and multivariate analysis, derivation set
| Factor | Univariate OR | Multivariate OR (95% CI) | ||
|---|---|---|---|---|
| 0 | Ref | - | Ref | - |
| 1 | 1.49 (1.18–1.88) | 0.0008 | 1.30 (1.02–1.65) | 0.0315 |
| ≥ 2 | 3.23 (2.07–5.03) | < .0001 | 2.22 (1.40–3.53) | 0.0007 |
| < 3.5 | 2.22 (1.79–2.74) | < .0001 | 1.59 (1.26–2.00) | < .0001 |
| ≥ 3.5 | Ref | - | Ref | - |
| ≤ 2.5xULN | Ref | - | Ref | - |
| > 2.5xULN | 2.43 (1.84–3.20) | < .0001 | 1.62 (1.18–2.22) | 0.0026 |
| ≤ ULN | Ref | - | Ref | - |
| > ULN | 1.69 (1.36–2.10) | < .0001 | 1.39 (1.09–1.77) | 0.0076 |
| < 60 | 1.38 (1.03–1.83) | 0.0289 | 1.35 (1.01–1.81) | 0.0455 |
| ≥ 60 | Ref | - | Ref | - |
| < 10 | 2.79 (2.09–3.72) | < .0001 | 1.99 (1.46–2.71) | < .0001 |
| ≥ 10 | Ref | - | Ref | - |
| < 400 | Ref | - | Ref | - |
| ≥ 400 | 1.80 (1.39–2.35) | < .0001 | 1.30 (0.98–1.72) | 0.0732 |
| < 150 | 1.26 (0.87–1.81) | 0.2790 | NA | NA |
| ≥ 150 | Ref | - | ||
| ≤ ULN | Ref | - | NA | NA |
| > ULN | 1.31 (1.03–1.67) | 0.0305 | ||
| < 4 | 1.27 (0.82–1.97) | 0.2790 | NA | NA |
| ≥ 4 | Ref | |||
| < 10.5 | Ref | - | NA | NA |
| ≥ 10.5 | 1.68 (1.25–2.25) | 0.0005 | ||
| < 0.5 | 1.47 (0.99–2.16) | 0.0538 | NA | NA |
| ≥ 0.5 | Ref | - | ||
| 0 | Ref | - | NA | NA |
| 1 | 0.66 (0.41–1.04) | 0.0753 | ||
| 2 | 0.62 (0.40–0.98) | 0.0421 | ||
| ≥ 3 | 0.56 (0.37–0.86) | 0.0076 | ||
| ≤ 8 | Ref | - | NA | NA |
| > 8 | 1.06 (0.86–1.30) | 0.6121 | ||
| < 18.5 | 1.59 (0.98–2.60) | - | NA | NA |
| ≥ 18.5 | Ref | 0.0616 | ||
| Brain | 1.04 (0.21–5.17) | 0.9669 | NA | NA |
| Breast | 1.07 (0.78–1.49) | 0.7541 | ||
| Gastrointestinal | Ref | - | ||
| Genitourinary | 0.58 (0.40–0.83) | 0.0028 | ||
| Gynecologic | 0.65 (0.45–0.95) | 0.0266 | ||
| Head and neck | 0.68 (0.43– 1.06) | 0.0847 | ||
| Melanoma and skin | 0.74 (0.46–1.19) | 0.2120 | ||
| Sarcoma | 0.68 (0.46–1.01) | 0.0563 | ||
| Thoracic | 0.99 (0.72–1.37) | 0.9729 | ||
| Unknown | 0.83 (0.27–2.52) | 0.7395 | ||
| No | Ref | - | NA | NA |
| Yes | 0.72 (0.47–1.10) | 0.1287 | ||
| 0–2 | Ref | - | NA | NA |
| 3 | 1.31 (0.99–1.42) | 0.0554 | ||
| ≥ 4 | 1.36 (1.09–1.69) | 0.0063 |
Odd-ratios are for early discontinuation with continuation to cycle 2 as the reference category.
Figure 1Cumulative distribution of multivariate model-estimated risk, derivation and validation set
The black line represents the proportion of patients in the derivation set with an estimated risk at or below a given risk (x-axis). The red line represents the proportion of patients in the validation set with an estimated risk at or below a given risk (x-axis).
Diagnostic accuracy of risk scores, derivation and validation sets
| Simplified Risk Score | |||
|---|---|---|---|
| Derivation Set | Validation Set | ||
| Sensitivity (95% CI) | 119/508 = 23.4% (19.8 – 27.4) | 3/34 = 8.8% (1.9 – 23.7) | |
| Specificity (95% CI) | 2314/2571 = 90% (88.8–91.1) | 182/198 = 92% (87.2 – 95.3) | |
| OCCR (95% CI) | 79% (77.5 – 80.5) | 79.7% (74.0 – 84.7) | |
| Sensitivity (95% CI) | 113/508 = 22.2% (18.7 – 26.1) | 4/34 = 11.8% (3.3 – 27.5) | |
| Specificity (95% CI) | 2317/2571 = 90.1% (88.9–91.3) | 182/198 = 91.9% (87.2 – 95.3) | |
| OCCR (95% CI) | 78.9% (77.4 – 80.4) | 80.2% (74.5 – 85.1) | |
Maximum possible score: 11
Maximum possible score: 4
OCCR: Overall Correct Classification Rate.
Figure 2Relationship between model predicted score and observed early discontinuation rate, derivation set
The line represents the total score [(A) expanded risk score, (B) simplified risk score] (x-axis) matched to the observed probability of early discontinuation (y-axis). Horizontal tick marks represents the 95% confidence interval around each estimate. The tables show the observed early discontinuation rate for selected scores.
Figure 3Impact of risk score on enrollment and early discontinuation
This figure demonstrates the impact on the derivation set of excluding patients with a simplified risk score ≥ 2.