Literature DB >> 25664789

The role of flexibility and molecular shape in the crystallization of proteins by surface mutagenesis.

Yancho D Devedjiev1.   

Abstract

Proteins are dynamic systems and interact with their environment. The analysis of crystal contacts in the most accurately determined protein structures (d < 1.5 Å) reveals that in contrast to current views, static disorder and high side-chain entropy are common in the crystal contact area. These observations challenge the validity of the theory that presumes that the occurrence of well ordered patches of side chains at the surface is an essential prerequisite for a successful crystallization event. The present paper provides evidence in support of the approach for understanding protein crystallization as a process dependent on multiple factors, each with its relative contribution, rather than a phenomenon driven by a few dominant physicochemical characteristics. The role of the molecular shape as a factor in the crystallization of proteins by surface mutagenesis is discussed.

Entities:  

Keywords:  conformational entropy; molecular shape; protein crystallization; static disorder; surface mutagenesis

Mesh:

Substances:

Year:  2015        PMID: 25664789      PMCID: PMC4321469          DOI: 10.1107/S2053230X14027861

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.056


  31 in total

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5.  The role of entropy and polarity in intermolecular contacts in protein crystals.

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Authors:  F Avbelj; L Fele
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Authors:  Yen-Ting Lai; Neil P King; Todd O Yeates
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8.  Competition between monomeric and dimeric crystals in schematic models for globular proteins.

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Journal:  J Phys Chem B       Date:  2014-03-31       Impact factor: 2.991

9.  The impact of Glu-->Ala and Glu-->Asp mutations on the crystallization properties of RhoGDI: the structure of RhoGDI at 1.3 A resolution.

Authors:  Agnieszka Mateja; Yancho Devedjiev; Daniel Krowarsch; Kenton Longenecker; Zbigniew Dauter; Jacek Otlewski; Zygmunt S Derewenda
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2002-11-23

10.  It's all in the crystals….

Authors:  Zygmunt S Derewenda
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2.  Crystallophore: a versatile lanthanide complex for protein crystallography combining nucleating effects, phasing properties, and luminescence.

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3.  Protein crystal lattices are dynamic assemblies: the role of conformational entropy in the protein condensed phase.

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  3 in total

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