Literature DB >> 22975357

Principles for designing ordered protein assemblies.

Yen-Ting Lai1, Neil P King, Todd O Yeates.   

Abstract

In nature, many proteins have evolved to have self-complementary shapes. This drives them to assemble into supramolecular structures, sometimes of great complexity, and often carrying out sophisticated cellular functions. Designing novel proteins that can self-assemble into similarly complex structures is a longstanding goal in bioengineering. New ideas, combined with continually improving computer algorithms, are making it possible to advance on that goal, bringing wide-ranging applications in synthetic biology within reach. Prospective applications range from vaccine design to molecular delivery to bioactive materials. Recent strategies and examples of successfully designed protein cages, layers, and crystals are reviewed.
Copyright © 2012 Elsevier Ltd. All rights reserved.

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Year:  2012        PMID: 22975357     DOI: 10.1016/j.tcb.2012.08.004

Source DB:  PubMed          Journal:  Trends Cell Biol        ISSN: 0962-8924            Impact factor:   20.808


  40 in total

1.  Shaping quaternary assemblies of water-soluble non-peptide helical foldamers by sequence manipulation.

Authors:  Gavin W Collie; Karolina Pulka-Ziach; Caterina M Lombardo; Juliette Fremaux; Frédéric Rosu; Marion Decossas; Laura Mauran; Olivier Lambert; Valérie Gabelica; Cameron D Mackereth; Gilles Guichard
Journal:  Nat Chem       Date:  2015-09-28       Impact factor: 24.427

2.  A Suite of Engineered GFP Molecules for Oligomeric Scaffolding.

Authors:  David J Leibly; Mark A Arbing; Inna Pashkov; Natasha DeVore; Geoffrey S Waldo; Thomas C Terwilliger; Todd O Yeates
Journal:  Structure       Date:  2015-08-13       Impact factor: 5.006

3.  Cages from coils.

Authors:  Bryan S Der; Brian Kuhlman
Journal:  Nat Biotechnol       Date:  2013-09       Impact factor: 54.908

4.  Multifarious assembly mixtures: systems allowing retrieval of diverse stored structures.

Authors:  Arvind Murugan; Zorana Zeravcic; Michael P Brenner; Stanislas Leibler
Journal:  Proc Natl Acad Sci U S A       Date:  2014-12-22       Impact factor: 11.205

5.  The role of flexibility and molecular shape in the crystallization of proteins by surface mutagenesis.

Authors:  Yancho D Devedjiev
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2015-01-28       Impact factor: 1.056

6.  Structure of a designed tetrahedral protein assembly variant engineered to have improved soluble expression.

Authors:  Jacob B Bale; Rachel U Park; Yuxi Liu; Shane Gonen; Tamir Gonen; Duilio Cascio; Neil P King; Todd O Yeates; David Baker
Journal:  Protein Sci       Date:  2015-08-06       Impact factor: 6.725

7.  Formation and carbon monoxide-dependent dissociation of Allochromatium vinosum cytochrome c' oligomers using domain-swapped dimers.

Authors:  Masaru Yamanaka; Makoto Hoshizumi; Satoshi Nagao; Ryoko Nakayama; Naoki Shibata; Yoshiki Higuchi; Shun Hirota
Journal:  Protein Sci       Date:  2017-02-14       Impact factor: 6.725

8.  Bacterial microcompartment shells of diverse functional types possess pentameric vertex proteins.

Authors:  Nicole M Wheatley; Soheil D Gidaniyan; Yuxi Liu; Duilio Cascio; Todd O Yeates
Journal:  Protein Sci       Date:  2013-04-08       Impact factor: 6.725

9.  Information capacity of specific interactions.

Authors:  Miriam H Huntley; Arvind Murugan; Michael P Brenner
Journal:  Proc Natl Acad Sci U S A       Date:  2016-05-06       Impact factor: 11.205

Review 10.  Functional protein nanostructures: a chemical toolbox.

Authors:  Seah Ling Kuan; Fernando R G Bergamini; Tanja Weil
Journal:  Chem Soc Rev       Date:  2018-11-19       Impact factor: 54.564

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