Literature DB >> 25644446

PTEN ceRNA networks in human cancer.

Laura Poliseno1, Pier Paolo Pandolfi2.   

Abstract

In multiple human cancer types, a close link exists between the expression levels of Phosphatase and Tensin Homolog deleted on chromosome 10 (PTEN) and its oncosuppressive activities. Therefore, an in depth understanding of the molecular mechanisms by which PTEN expression is modulated is crucial in order to achieve a comprehensive knowledge of its biological roles. In recent years, the competition between PTEN mRNA and other RNAs for shared microRNA molecules has emerged as one such mechanism and has brought into focus the coding-independent activities of PTEN and other mRNAs. In this review article, we examine the competing endogenous RNA (ceRNA) partners of PTEN that have been identified so far. We also discuss how PTEN-centered ceRNA networks can contribute to a deeper understanding of PTEN function and tumorigenesis.
Copyright © 2015. Published by Elsevier Inc.

Entities:  

Keywords:  Competing endogenous RNAs; PTEN; Scale-free networks; microRNAs

Mesh:

Substances:

Year:  2015        PMID: 25644446     DOI: 10.1016/j.ymeth.2015.01.013

Source DB:  PubMed          Journal:  Methods        ISSN: 1046-2023            Impact factor:   3.608


  58 in total

Review 1.  Competing endogenous RNA networks and gastric cancer.

Authors:  Lei-Lei Guo; Chun-Hua Song; Peng Wang; Li-Ping Dai; Jian-Ying Zhang; Kai-Juan Wang
Journal:  World J Gastroenterol       Date:  2015-11-07       Impact factor: 5.742

2.  Systematic evaluation of the microRNAome through miR-CATCHv2.0 identifies positive and negative regulators of BRAF-X1 mRNA.

Authors:  Andrea Marranci; Romina D'Aurizio; Sebastian Vencken; Serena Mero; Elena Guzzolino; Milena Rizzo; Letizia Pitto; Marco Pellegrini; Giovanna Chiorino; Catherine M Greene; Laura Poliseno
Journal:  RNA Biol       Date:  2019-04-19       Impact factor: 4.652

3.  High-Throughput Identification of miRNA-Target Interactions in Melanoma Using miR-CATCHv2.0.

Authors:  Andrea Marranci; Romina D'Aurizio; Milena Rizzo; Catherine M Greene; Laura Poliseno
Journal:  Methods Mol Biol       Date:  2021

4.  IGF1 3'UTR functions as a ceRNA in promoting angiogenesis by sponging miR-29 family in osteosarcoma.

Authors:  Shuming Gao; Cai Cheng; Hanwen Chen; Min Li; Kehun Liu; Guangya Wang
Journal:  J Mol Histol       Date:  2016-01-12       Impact factor: 2.611

Review 5.  Endogenous microRNA sponges: evidence and controversy.

Authors:  Daniel W Thomson; Marcel E Dinger
Journal:  Nat Rev Genet       Date:  2016-04-04       Impact factor: 53.242

6.  Pseudogenes: A Novel Source of Trans-Acting Antisense RNAs.

Authors:  Nicholas C Lister; Per Johnsson; Paul D Waters; Kevin V Morris
Journal:  Methods Mol Biol       Date:  2021

7.  Pseudogenes as Competitive Endogenous RNAs: Testing miRNA Dependency.

Authors:  Xiaonan Xu; Florian A Karreth
Journal:  Methods Mol Biol       Date:  2021

Review 8.  The development and controversy of competitive endogenous RNA hypothesis in non-coding genes.

Authors:  Weimin Lin; Hongcheng Liu; Yonghang Tang; Yuchen Wei; Wei Wei; Lifan Zhang; Jie Chen
Journal:  Mol Cell Biochem       Date:  2020-09-25       Impact factor: 3.396

9.  PseudoFuN: Deriving functional potentials of pseudogenes from integrative relationships with genes and microRNAs across 32 cancers.

Authors:  Travis S Johnson; Sihong Li; Eric Franz; Zhi Huang; Shuyu Dan Li; Moray J Campbell; Kun Huang; Yan Zhang
Journal:  Gigascience       Date:  2019-05-01       Impact factor: 6.524

10.  Network analysis of pseudogene-gene relationships: from pseudogene evolution to their functional potentials.

Authors:  Travis S Johnson; Sihong Li; Jonathan R Kho; Kun Huang; Yan Zhang
Journal:  Pac Symp Biocomput       Date:  2018
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