Literature DB >> 25625331

KH-RNA interactions: back in the groove.

Giuseppe Nicastro1, Ian A Taylor1, Andres Ramos2.   

Abstract

The hnRNP K-homology (KH) domain is a single stranded nucleic acid binding domain that mediates RNA target recognition by a large group of gene regulators. The structure of the KH fold is well characterised and some initial rules for KH-RNA recognition have been drafted. However, recent findings have shown that these rules need to be revisited and have now provided a better understanding of how the domain can recognise a sequence landscape larger than previously thought as well as revealing the diversity of structural expansions to the KH domain. Finally, novel structural and functional data show how multiple KH domains act in a combinatorial fashion to both allow recognition of longer RNA motifs and remodelling of the RNA structure. These advances set the scene for a detailed molecular understanding of KH selection of the cellular targets.
Copyright © 2015 Elsevier Ltd. All rights reserved.

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Year:  2015        PMID: 25625331     DOI: 10.1016/j.sbi.2015.01.002

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  53 in total

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Journal:  J Biol Chem       Date:  2017-08-14       Impact factor: 5.157

2.  Domain definition and interaction mapping for the endonuclease complex hNob1/hPno1.

Authors:  Finaritra Raoelijaona; Stéphane Thore; Sébastien Fribourg
Journal:  RNA Biol       Date:  2018-09-18       Impact factor: 4.652

3.  Absence of the KhpA and KhpB (JAG/EloR) RNA-binding proteins suppresses the requirement for PBP2b by overproduction of FtsA in Streptococcus pneumoniae D39.

Authors:  Jiaqi J Zheng; Amilcar J Perez; Ho-Ching Tiffany Tsui; Orietta Massidda; Malcolm E Winkler
Journal:  Mol Microbiol       Date:  2017-11-02       Impact factor: 3.501

4.  A single KH domain in Bicaudal-C links mRNA binding and translational repression functions to maternal development.

Authors:  Megan E Dowdle; Sookhee Park; Susanne Blaser Imboden; Catherine A Fox; Douglas W Houston; Michael D Sheets
Journal:  Development       Date:  2019-05-15       Impact factor: 6.868

5.  RNA-Binding Specificity of the Human Fragile X Mental Retardation Protein.

Authors:  Youssi M Athar; Simpson Joseph
Journal:  J Mol Biol       Date:  2020-04-25       Impact factor: 5.469

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Authors:  Lysangela Ronalte Alves; Samuel Goldenberg
Journal:  World J Biol Chem       Date:  2016-02-26

7.  The Human Fragile X Mental Retardation Protein Inhibits the Elongation Step of Translation through Its RGG and C-Terminal Domains.

Authors:  Youssi M Athar; Simpson Joseph
Journal:  Biochemistry       Date:  2020-09-29       Impact factor: 3.162

Review 8.  RNA Structures as Mediators of Neurological Diseases and as Drug Targets.

Authors:  Viachaslau Bernat; Matthew D Disney
Journal:  Neuron       Date:  2015-07-01       Impact factor: 17.173

Review 9.  The potential of engineered eukaryotic RNA-binding proteins as molecular tools and therapeutics.

Authors:  Carl R Shotwell; John D Cleary; J Andrew Berglund
Journal:  Wiley Interdiscip Rev RNA       Date:  2019-11-03       Impact factor: 9.957

10.  Heterogeneous Ribonucleoprotein K (hnRNP K) Binds miR-122, a Mature Liver-Specific MicroRNA Required for Hepatitis C Virus Replication.

Authors:  Baochang Fan; F X Reymond Sutandy; Guan-Da Syu; Stefani Middleton; Guanghui Yi; Kuan-Yi Lu; Chien-Sheng Chen; C Cheng Kao
Journal:  Mol Cell Proteomics       Date:  2015-09-01       Impact factor: 5.911

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