Literature DB >> 26981197

RNA-binding proteins related to stress response and differentiation in protozoa.

Lysangela Ronalte Alves1, Samuel Goldenberg1.   

Abstract

RNA-binding proteins (RBPs) are key regulators of gene expression. There are several distinct families of RBPs and they are involved in the cellular response to environmental changes, cell differentiation and cell death. The RBPs can differentially combine with RNA molecules and form ribonucleoprotein (RNP) complexes, defining the function and fate of RNA molecules in the cell. RBPs display diverse domains that allow them to be categorized into distinct families. They play important roles in the cellular response to physiological stress, in cell differentiation, and, it is believed, in the cellular localization of certain mRNAs. In several protozoa, a physiological stress (nutritional, temperature or pH) triggers differentiation to a distinct developmental stage. Most of the RBPs characterized in protozoa arise from trypanosomatids. In these protozoa gene expression regulation is mostly post-transcriptional, which suggests that some RBPs might display regulatory functions distinct from those described for other eukaryotes. mRNA stability can be altered as a response to stress. Transcripts are sequestered to RNA granules that ultimately modulate their availability to the translation machinery, storage or degradation, depending on the associated proteins. These aggregates of mRNPs containing mRNAs that are not being translated colocalize in cytoplasmic foci, and their numbers and size vary according to cell conditions such as oxidative stress, nutritional status and treatment with drugs that inhibit translation.

Entities:  

Keywords:  Gene expression regulation; Protozoa; RNA granules; RNA-binding proteins; RNA-protein complexes; Stress and cell differentiation

Year:  2016        PMID: 26981197      PMCID: PMC4768126          DOI: 10.4331/wjbc.v7.i1.78

Source DB:  PubMed          Journal:  World J Biol Chem        ISSN: 1949-8454


  95 in total

Review 1.  Aminoacyl-tRNA synthetases: a new image for a classical family.

Authors:  S A Martinis; P Plateau; J Cavarelli; C Florentz
Journal:  Biochimie       Date:  1999-07       Impact factor: 4.079

Review 2.  How cells get the message: dynamic assembly and function of mRNA-protein complexes.

Authors:  Michaela Müller-McNicoll; Karla M Neugebauer
Journal:  Nat Rev Genet       Date:  2013-03-12       Impact factor: 53.242

3.  The Plasmodium falciparum sexual development transcriptome: a microarray analysis using ontology-based pattern identification.

Authors:  Jason A Young; Quinton L Fivelman; Peter L Blair; Patricia de la Vega; Karine G Le Roch; Yingyao Zhou; Daniel J Carucci; David A Baker; Elizabeth A Winzeler
Journal:  Mol Biochem Parasitol       Date:  2005-09       Impact factor: 1.759

4.  Formation of GW bodies is a consequence of microRNA genesis.

Authors:  Kaleb M Pauley; Theophany Eystathioy; Andrew Jakymiw; John C Hamel; Marvin J Fritzler; Edward K L Chan
Journal:  EMBO Rep       Date:  2006-08-11       Impact factor: 8.807

5.  Developmental progression to infectivity in Trypanosoma brucei triggered by an RNA-binding protein.

Authors:  Nikolay G Kolev; Kiantra Ramey-Butler; George A M Cross; Elisabetta Ullu; Christian Tschudi
Journal:  Science       Date:  2012-12-07       Impact factor: 47.728

6.  Disruption of the nucleolus mediates stabilization of p53 in response to DNA damage and other stresses.

Authors:  Carlos P Rubbi; Jo Milner
Journal:  EMBO J       Date:  2003-11-17       Impact factor: 11.598

7.  Sequence-specific binding of transfer RNA by glyceraldehyde-3-phosphate dehydrogenase.

Authors:  R Singh; M R Green
Journal:  Science       Date:  1993-01-15       Impact factor: 47.728

8.  Direct binding of glyceraldehyde 3-phosphate dehydrogenase to telomeric DNA protects telomeres against chemotherapy-induced rapid degradation.

Authors:  Neil A Demarse; Suriyan Ponnusamy; Eleanor K Spicer; Elif Apohan; John E Baatz; Besim Ogretmen; Christopher Davies
Journal:  J Mol Biol       Date:  2009-10-02       Impact factor: 5.469

9.  An essential nuclear protein in trypanosomes is a component of mRNA transcription/export pathway.

Authors:  Mariana Serpeloni; Carolina Borsoi Moraes; João Renato Carvalho Muniz; Maria Cristina Machado Motta; Augusto Savio Peixoto Ramos; Rafael Luis Kessler; Alexandre Haruo Inoue; Wanderson Duarte daRocha; Sueli Fumie Yamada-Ogatta; Stenio Perdigão Fragoso; Samuel Goldenberg; Lucio H Freitas-Junior; Andréa Rodrigues Avila
Journal:  PLoS One       Date:  2011-06-08       Impact factor: 3.240

10.  The post-transcriptional trans-acting regulator, TbZFP3, co-ordinates transmission-stage enriched mRNAs in Trypanosoma brucei.

Authors:  Pegine B Walrad; Paul Capewell; Katelyn Fenn; Keith R Matthews
Journal:  Nucleic Acids Res       Date:  2011-12-02       Impact factor: 16.971

View more
  6 in total

1.  Polysome Profiling in Leishmania, Human Cells and Mouse Testis.

Authors:  Zemfira N Karamysheva; Elena B Tikhonova; Petar N Grozdanov; James C Huffman; Kristen R Baca; Alexander Karamyshev; R Brian Denison; Clinton C MacDonald; Kai Zhang; Andrey L Karamyshev
Journal:  J Vis Exp       Date:  2018-04-08       Impact factor: 1.355

2.  Assessing the partners of the RBP9-mRNP complex in Trypanosoma cruzi using shotgun proteomics and RNA-seq.

Authors:  Helisa Helena Wippel; Alexandre Haruo Inoue; Newton Medeiros Vidal; Jimena Ferreira da Costa; Bruna Hilzendeger Marcon; Bruno Accioly Alves Romagnoli; Marlon Dias Mariano Santos; Paulo Costa Carvalho; Samuel Goldenberg; Lysangela Ronalte Alves
Journal:  RNA Biol       Date:  2018-09-10       Impact factor: 4.652

3.  RNA-binding proteins and their role in the regulation of gene expression in Trypanosoma cruzi and Saccharomyces cerevisiae.

Authors:  Camila Oliveira; Helisson Faoro; Lysangela Ronalte Alves; Samuel Goldenberg
Journal:  Genet Mol Biol       Date:  2017 Jan-Mar       Impact factor: 1.771

4.  Unveiling the partners of the DRBD2-mRNP complex, an RBP in Trypanosoma cruzi and ortholog to the yeast SR-protein Gbp2.

Authors:  Helisa Helena Wippel; Juliane Soldi Malgarin; Alexandre Haruo Inoue; Felipe da Veiga Leprevost; Paulo Costa Carvalho; Samuel Goldenberg; Lysangela Ronalte Alves
Journal:  BMC Microbiol       Date:  2019-06-11       Impact factor: 3.605

Review 5.  Redox Balance Keepers and Possible Cell Functions Managed by Redox Homeostasis in Trypanosoma cruzi.

Authors:  Andrea C Mesías; Nisha J Garg; M Paola Zago
Journal:  Front Cell Infect Microbiol       Date:  2019-12-20       Impact factor: 5.293

6.  Characterization of the RNA-Binding Protein TcSgn1 in Trypanosoma cruzi.

Authors:  Camila Oliveira; André P Gerber; Samuel Goldenberg; Lysangela R Alves
Journal:  Microorganisms       Date:  2021-05-02
  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.