Literature DB >> 2562219

E. coli ribosomes re-phase on retroviral frameshift signals at rates ranging from 2 to 50 percent.

R B Weiss1, D M Dunn, M Shuh, J F Atkins, R F Gesteland.   

Abstract

Many retroviruses express gag-pol or gag-pro-pol polypeptides by coupling their translation from overlapping reading frames with -1 ribosomal frameshifts. Here, we show that the well-known ribosomal frameshift signals found in retroviral mRNA will provoke Escherichia coli ribosomes to shift frame in the same manner as their eukaryotic counterparts. Ribosomes of E. coli respond in vivo to both the tandem slippery codons present at the retroviral frameshift site and the 3' flanking sequence. Slight alteration of the mouse mammary tumor virus gag-pro frameshift site from A-AAA-AAC to A-AAA-AAG boosts the level of frameshifting in E. coli to over 50%. This suggests that A-AAA-AAG, and its slippery relatives, may be utilized by E. coli genes as sites of high-level ribosomal frameshifting. This observed conservation of response to retroviral frameshift signals affords new avenues to dissect the mechanism of ribosomal frameshifting evoked by these mRNA sequences.

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Year:  1989        PMID: 2562219

Source DB:  PubMed          Journal:  New Biol        ISSN: 1043-4674


  100 in total

1.  Structural analysis of the -1 ribosomal frameshift elements in giardiavirus mRNA.

Authors:  L Li; A L Wang; C C Wang
Journal:  J Virol       Date:  2001-11       Impact factor: 5.103

Review 2.  Targeting frameshifting in the human immunodeficiency virus.

Authors:  Léa Brakier-Gingras; Johanie Charbonneau; Samuel E Butcher
Journal:  Expert Opin Ther Targets       Date:  2012-03       Impact factor: 6.902

3.  Translational recoding signals between gag and pol in diverse LTR retrotransposons.

Authors:  Xiang Gao; Ericka R Havecker; Pavel V Baranov; John F Atkins; Daniel F Voytas
Journal:  RNA       Date:  2003-12       Impact factor: 4.942

4.  Transfer RNA modifications that alter +1 frameshifting in general fail to affect -1 frameshifting.

Authors:  Jaunius Urbonavicius; Guillaume Stahl; Jérôme M B Durand; Samia N Ben Salem; Qiang Qian; Philip J Farabaugh; Glenn R Björk
Journal:  RNA       Date:  2003-06       Impact factor: 4.942

Review 5.  P-site tRNA is a crucial initiator of ribosomal frameshifting.

Authors:  Pavel V Baranov; Raymond F Gesteland; John F Atkins
Journal:  RNA       Date:  2004-02       Impact factor: 4.942

Review 6.  The 9-A solution: how mRNA pseudoknots promote efficient programmed -1 ribosomal frameshifting.

Authors:  Ewan P Plant; Kristi L Muldoon Jacobs; Jason W Harger; Arturas Meskauskas; Jonathan L Jacobs; Jennifer L Baxter; Alexey N Petrov; Jonathan D Dinman
Journal:  RNA       Date:  2003-02       Impact factor: 4.942

7.  Sequences that direct significant levels of frameshifting are frequent in coding regions of Escherichia coli.

Authors:  Olga L Gurvich; Pavel V Baranov; Jiadong Zhou; Andrew W Hammer; Raymond F Gesteland; John F Atkins
Journal:  EMBO J       Date:  2003-11-03       Impact factor: 11.598

8.  Ribosomal movement impeded at a pseudoknot required for frameshifting.

Authors:  C Tu; T H Tzeng; J A Bruenn
Journal:  Proc Natl Acad Sci U S A       Date:  1992-09-15       Impact factor: 11.205

9.  A -1 ribosomal frameshift in the transcript that encodes the major head protein of bacteriophage A2 mediates biosynthesis of a second essential component of the capsid.

Authors:  Pilar García; Isabel Rodríguez; Juan E Suárez
Journal:  J Bacteriol       Date:  2004-03       Impact factor: 3.490

10.  The pKO2 linear plasmid prophage of Klebsiella oxytoca.

Authors:  Sherwood R Casjens; Eddie B Gilcrease; Wai Mun Huang; Kim L Bunny; Marisa L Pedulla; Michael E Ford; Jennifer M Houtz; Graham F Hatfull; Roger W Hendrix
Journal:  J Bacteriol       Date:  2004-03       Impact factor: 3.490

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