Literature DB >> 25598080

Biomarkers of NAFLD progression: a lipidomics approach to an epidemic.

D Lee Gorden1, David S Myers2, Pavlina T Ivanova2, Eoin Fahy3, Mano R Maurya3, Shakti Gupta3, Jun Min3, Nathanael J Spann4, Jeffrey G McDonald5, Samuel L Kelly6, Jingjing Duan6, M Cameron Sullards6, Thomas J Leiker7, Robert M Barkley7, Oswald Quehenberger8, Aaron M Armando9, Stephen B Milne2, Thomas P Mathews2, Michelle D Armstrong2, Chijun Li10, Willie V Melvin11, Ronald H Clements11, M Kay Washington12, Alisha M Mendonsa13, Joseph L Witztum14, Ziqiang Guan10, Christopher K Glass4, Robert C Murphy7, Edward A Dennis15, Alfred H Merrill6, David W Russell5, Shankar Subramaniam16, H Alex Brown17.   

Abstract

The spectrum of nonalcoholic fatty liver disease (NAFLD) includes steatosis, nonalcoholic steatohepatitis (NASH), and cirrhosis. Recognition and timely diagnosis of these different stages, particularly NASH, is important for both potential reversibility and limitation of complications. Liver biopsy remains the clinical standard for definitive diagnosis. Diagnostic tools minimizing the need for invasive procedures or that add information to histologic data are important in novel management strategies for the growing epidemic of NAFLD. We describe an "omics" approach to detecting a reproducible signature of lipid metabolites, aqueous intracellular metabolites, SNPs, and mRNA transcripts in a double-blinded study of patients with different stages of NAFLD that involves profiling liver biopsies, plasma, and urine samples. Using linear discriminant analysis, a panel of 20 plasma metabolites that includes glycerophospholipids, sphingolipids, sterols, and various aqueous small molecular weight components involved in cellular metabolic pathways, can be used to differentiate between NASH and steatosis. This identification of differential biomolecular signatures has the potential to improve clinical diagnosis and facilitate therapeutic intervention of NAFLD.
Copyright © 2015 by the American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  diagnostic tools; mass spectrometry; nonalcoholic fatty liver disease; nonalcoholic steatohepatitis; phospholipids; sphingolipids

Mesh:

Substances:

Year:  2015        PMID: 25598080      PMCID: PMC4340319          DOI: 10.1194/jlr.P056002

Source DB:  PubMed          Journal:  J Lipid Res        ISSN: 0022-2275            Impact factor:   5.922


  69 in total

1.  A genomic and proteomic study of the spectrum of nonalcoholic fatty liver disease.

Authors:  Zobair M Younossi; Ancha Baranova; Katharine Ziegler; Luca Del Giacco; Karen Schlauch; Timothy L Born; Hazem Elariny; Francesco Gorreta; Amy VanMeter; Abraham Younoszai; Janus P Ong; Zachary Goodman; Vikas Chandhoke
Journal:  Hepatology       Date:  2005-09       Impact factor: 17.425

2.  OSA: a fast and accurate alignment tool for RNA-Seq.

Authors:  Jun Hu; Huanying Ge; Matt Newman; Kejun Liu
Journal:  Bioinformatics       Date:  2012-05-15       Impact factor: 6.937

3.  Analysis of Diacylglycerol Molecular Species in Cellular Lipid Extracts by Normal-Phase LC-Electrospray Mass Spectrometry.

Authors:  Thomas J Leiker; Robert M Barkley; Robert C Murphy
Journal:  Int J Mass Spectrom       Date:  2011-08-15       Impact factor: 1.986

4.  Nonalcoholic fatty liver, steatohepatitis, and the metabolic syndrome.

Authors:  Giulio Marchesini; Elisabetta Bugianesi; Gabriele Forlani; Fernanda Cerrelli; Marco Lenzi; Rita Manini; Stefania Natale; Ester Vanni; Nicola Villanova; Nazario Melchionda; Mario Rizzetto
Journal:  Hepatology       Date:  2003-04       Impact factor: 17.425

5.  Biophysical properties of novel 1-deoxy-(dihydro)ceramides occurring in mammalian cells.

Authors:  Noemi Jiménez-Rojo; Jesús Sot; Jon V Busto; Walt A Shaw; Jingjing Duan; Alfred H Merrill; Alicia Alonso; Félix M Goñi
Journal:  Biophys J       Date:  2014-12-16       Impact factor: 4.033

6.  Separation of cellular nonpolar neutral lipids by normal-phase chromatography and analysis by electrospray ionization mass spectrometry.

Authors:  Patrick M Hutchins; Robert M Barkley; Robert C Murphy
Journal:  J Lipid Res       Date:  2008-01-25       Impact factor: 5.922

7.  Deoxysphingolipids, novel biomarkers for type 2 diabetes, are cytotoxic for insulin-producing cells.

Authors:  Richard A Zuellig; Thorsten Hornemann; Alaa Othman; Adrian B Hehl; Heiko Bode; Tanja Güntert; Omolara O Ogunshola; Enrica Saponara; Kamile Grabliauskaite; Jae-Hwi Jang; Udo Ungethuem; Yu Wei; Arnold von Eckardstein; Rolf Graf; Sabrina Sonda
Journal:  Diabetes       Date:  2013-12-30       Impact factor: 9.461

8.  Differential expression analysis for sequence count data.

Authors:  Simon Anders; Wolfgang Huber
Journal:  Genome Biol       Date:  2010-10-27       Impact factor: 13.583

9.  Human breast cancer tissues contain abundant phosphatidylcholine(36∶1) with high stearoyl-CoA desaturase-1 expression.

Authors:  Yoshimi Ide; Michihiko Waki; Takahiro Hayasaka; Tomohisa Nishio; Yoshifumi Morita; Hiroki Tanaka; Takeshi Sasaki; Kei Koizumi; Ryoichi Matsunuma; Yuko Hosokawa; Hiroyuki Ogura; Norihiko Shiiya; Mitsutoshi Setou
Journal:  PLoS One       Date:  2013-04-16       Impact factor: 3.240

10.  Pnpla3I148M knockin mice accumulate PNPLA3 on lipid droplets and develop hepatic steatosis.

Authors:  Eriks Smagris; Soumik BasuRay; John Li; Yongcheng Huang; Ka-man V Lai; Jesper Gromada; Jonathan C Cohen; Helen H Hobbs
Journal:  Hepatology       Date:  2014-10-01       Impact factor: 17.425

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  113 in total

1.  Lipid Profiling of In Vitro Cell Models of Adipogenic Differentiation: Relationships With Mouse Adipose Tissues.

Authors:  Lucy Liaw; Igor Prudovsky; Robert A Koza; Rea V Anunciado-Koza; Matthew E Siviski; Volkhard Lindner; Robert E Friesel; Clifford J Rosen; Paul R S Baker; Brigitte Simons; Calvin P H Vary
Journal:  J Cell Biochem       Date:  2016-03-16       Impact factor: 4.429

Review 2.  An Intestinal Microbiota-Farnesoid X Receptor Axis Modulates Metabolic Disease.

Authors:  Frank J Gonzalez; Changtao Jiang; Andrew D Patterson
Journal:  Gastroenterology       Date:  2016-09-14       Impact factor: 22.682

Review 3.  Composite prognostic models across the non-alcoholic fatty liver disease spectrum: Clinical application in developing countries.

Authors:  Hilmar K Lückhoff; Frederik C Kruger; Maritha J Kotze
Journal:  World J Hepatol       Date:  2015-05-28

4.  Serum microRNAs explain discordance of non-alcoholic fatty liver disease in monozygotic and dizygotic twins: a prospective study.

Authors:  Amir Zarrinpar; Shakti Gupta; Mano R Maurya; Shankar Subramaniam; Rohit Loomba
Journal:  Gut       Date:  2015-05-22       Impact factor: 23.059

Review 5.  Evolution of the liver biopsy and its future.

Authors:  Dhanpat Jain; Richard Torres; Romulo Celli; Jeremy Koelmel; Georgia Charkoftaki; Vasilis Vasiliou
Journal:  Transl Gastroenterol Hepatol       Date:  2021-04-05

Review 6.  Distinct but complementary contributions of PPAR isotypes to energy homeostasis.

Authors:  Vanessa Dubois; Jérôme Eeckhoute; Philippe Lefebvre; Bart Staels
Journal:  J Clin Invest       Date:  2017-04-03       Impact factor: 14.808

7.  Niche-Specific Reprogramming of Epigenetic Landscapes Drives Myeloid Cell Diversity in Nonalcoholic Steatohepatitis.

Authors:  Jason S Seidman; Ty D Troutman; Mashito Sakai; Anita Gola; Nathanael J Spann; Hunter Bennett; Cassi M Bruni; Zhengyu Ouyang; Rick Z Li; Xiaoli Sun; BaoChau T Vu; Martina P Pasillas; Kaori M Ego; David Gosselin; Verena M Link; Ling-Wa Chong; Ronald M Evans; Bonne M Thompson; Jeffrey G McDonald; Mojgan Hosseini; Joseph L Witztum; Ronald N Germain; Christopher K Glass
Journal:  Immunity       Date:  2020-05-01       Impact factor: 31.745

Review 8.  The role of hypoxia-inducible factors in metabolic diseases.

Authors:  Frank J Gonzalez; Cen Xie; Changtao Jiang
Journal:  Nat Rev Endocrinol       Date:  2018-12       Impact factor: 43.330

9.  A Novel Combination of Fruits and Vegetables Prevents Diet-Induced Hepatic Steatosis and Metabolic Dysfunction in Mice.

Authors:  Weimin Guo; Dayong Wu; Maria C Dao; Lijun Li; Erin D Lewis; Edwin F Ortega; Heesun Eom; Michael Thomas; Mariana Nikolova-Karakashian; Mohsen Meydani; Simin N Meydani
Journal:  J Nutr       Date:  2020-11-19       Impact factor: 4.798

10.  Development of an in vitro human liver system for interrogating nonalcoholic steatohepatitis.

Authors:  Ryan E Feaver; Banumathi K Cole; Mark J Lawson; Stephen A Hoang; Svetlana Marukian; Brett R Blackman; Robert A Figler; Arun J Sanyal; Brian R Wamhoff; Ajit Dash
Journal:  JCI Insight       Date:  2016-12-08
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