Literature DB >> 33824924

Evolution of the liver biopsy and its future.

Dhanpat Jain1, Richard Torres2, Romulo Celli1, Jeremy Koelmel3, Georgia Charkoftaki3, Vasilis Vasiliou3.   

Abstract

Liver biopsies are commonly used to evaluate a wide variety of medical disorders, including neoplasms and post-transplant complications. However, its use is being impacted by improved clinical diagnosis of disorders, and non-invasive methods for evaluating liver tissue and as a result the indications of a liver biopsy have undergone major changes in the last decade. The evolution of highly effective treatments for some of the common indications for liver biopsy in the last decade (e.g., viral hepatitis B and C) has led to a decline in the number of liver biopsies in recent years. At the same time, the emergence of better technologies for histologic evaluation, tissue content analysis and genomics are among the many new and exciting developments in the field that hold great promise for the future and are going to shape the indications for a liver biopsy in the future. Recent advances in slide scanners now allow creation of "digital/virtual" slides that have image of the entire tissue section present in a slide [whole slide imaging (WSI)]. WSI can now be done very rapidly and at very high resolution, allowing its use in routine clinical practice. In addition, a variety of technologies have been developed in recent years that use different light sources and/or microscopes allowing visualization of tissues in a completely different way. One such technique that is applicable to liver specimens combines multiphoton microscopy (MPM) with advanced clearing and fluorescent stains known as Clearing Histology with MultiPhoton Microscopy (CHiMP). Although it has not yet been extensively validated, the technique has the potential to decrease inefficiency, reduce artifacts, and increase data while being readily integrable into clinical workflows. Another technology that can provide rapid and in-depth characterization of thousands of molecules in a tissue sample, including liver tissues, is matrix assisted laser desorption/ionization (MALDI) mass spectrometry. MALDI has already been applied in a clinical research setting with promising diagnostic and prognostic capabilities, as well as being able to elucidate mechanisms of liver diseases that may be targeted for the development of new therapies. The logical next step in huge data sets obtained from such advanced analysis of liver tissues is the application of machine learning (ML) algorithms and application of artificial intelligence (AI), for automated generation of diagnoses and prognoses. This review discusses the evolving role of liver biopsies in clinical practice over the decades, and describes newer technologies that are likely to have a significant impact on how they will be used in the future. 2021 Translational Gastroenterology and Hepatology. All rights reserved.

Entities:  

Keywords:  Clearing Histology with MultiPhoton Microscopy (CHiMP); Liver biopsy; matrix assisted laser desorption imaging (MALDI); whole slide imaging (WSI)

Year:  2021        PMID: 33824924      PMCID: PMC7829074          DOI: 10.21037/tgh.2020.04.01

Source DB:  PubMed          Journal:  Transl Gastroenterol Hepatol        ISSN: 2415-1289


  132 in total

1.  Ex vivo imaging and quantification of liver fibrosis using second-harmonic generation microscopy.

Authors:  Tzu-Lin Sun; Yuan Liu; Ming-Chin Sung; Hsiao-Ching Chen; Chun-Hui Yang; Vladimir Hovhannisyan; Wei-Chou Lin; Yung-Ming Jeng; Wei-Liang Chen; Ling-Ling Chiou; Guan-Tarn Huang; Ki-Hean Kim; Peter T C So; Yang-Fang Chen; Hsuan-Shu Lee; Chen-Yuan Dong
Journal:  J Biomed Opt       Date:  2010 May-Jun       Impact factor: 3.170

2.  Indications of Liver Biopsy in the Era of Noninvasive Assessment of Liver Fibrosis.

Authors:  Deepak Amarapurkar; Anjali Amarapurkar
Journal:  J Clin Exp Hepatol       Date:  2015-10-23

Review 3.  Biomarkers of disease and post-mortem changes - Heat stabilization, a necessary tool for measurement of protein regulation.

Authors:  Kim Kultima; Karl Sköld; Mats Borén
Journal:  J Proteomics       Date:  2011-06-17       Impact factor: 4.044

4.  Evaluation of the Bruker MALDI Biotyper for identification of Gram-positive rods: development of a diagnostic algorithm for the clinical laboratory.

Authors:  Bettina Schulthess; Guido V Bloemberg; Reinhard Zbinden; Erik C Böttger; Michael Hombach
Journal:  J Clin Microbiol       Date:  2014-01-22       Impact factor: 5.948

5.  Direct and indirect evidence for the reversibility of cirrhosis.

Authors:  Jeanne Serpaggi; Françoise Carnot; Bertrand Nalpas; Danièle Canioni; Jérôme Guéchot; Pascal Lebray; Anaïs Vallet-Pichard; Hélène Fontaine; Pierre Bedossa; Stanislas Pol
Journal:  Hum Pathol       Date:  2006-09-25       Impact factor: 3.466

6.  Optical biopsy of liver fibrosis by use of multiphoton microscopy.

Authors:  Hsuan-Shu Lee; Yuan Liu; Hsiao-Ching Chen; Ling-Ling Chiou; Guan-Tarn Huang; Wen Lo; Chen-Yuan Dong
Journal:  Opt Lett       Date:  2004-11-15       Impact factor: 3.776

7.  Examining heat treatment for stabilization of the lipidome.

Authors:  Jeremy P Koelmel; Christina M Jones; Candice Z Ulmer; Timothy J Garrett; Richard A Yost; Tracey B Schock; John A Bowden
Journal:  Bioanalysis       Date:  2018-02-16       Impact factor: 2.681

8.  Determination of the formation rate of phosphatidylethanol by phospholipase D (PLD) in blood and test of two selective PLD inhibitors.

Authors:  Alexandra Schröck; Anna Henzi; Peter Bütikofer; Stefan König; Wolfgang Weinmann
Journal:  Alcohol       Date:  2018-03-20       Impact factor: 2.405

9.  Spatial Systems Lipidomics Reveals Nonalcoholic Fatty Liver Disease Heterogeneity.

Authors:  Klára Ščupáková; Zita Soons; Gökhan Ertaylan; Keely A Pierzchalski; Gert B Eijkel; Shane R Ellis; Jan W Greve; Ann Driessen; Joanne Verheij; Theo M De Kok; Steven W M Olde Damink; Sander S Rensen; Ron M A Heeren
Journal:  Anal Chem       Date:  2018-04-03       Impact factor: 6.986

10.  Application of maldi-tof mass spectrometry in clinical virology: a review.

Authors:  Fernando Cobo
Journal:  Open Virol J       Date:  2013-09-27
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  4 in total

1.  A Framework for Augmented Intelligence in Allergy and Immunology Practice and Research-A Work Group Report of the AAAAI Health Informatics, Technology, and Education Committee.

Authors:  Paneez Khoury; Renganathan Srinivasan; Sujani Kakumanu; Sebastian Ochoa; Anjeni Keswani; Rachel Sparks; Nicholas L Rider
Journal:  J Allergy Clin Immunol Pract       Date:  2022-03-15

2.  Multimodal NASH prognosis using 3D imaging flow cytometry and artificial intelligence to characterize liver cells.

Authors:  Ramkumar Subramanian; Rui Tang; Zunming Zhang; Vaidehi Joshi; Jeffrey N Miner; Yu-Hwa Lo
Journal:  Sci Rep       Date:  2022-07-01       Impact factor: 4.996

3.  Ex Vivo Fluorescence Confocal Microscopy in Specimens of the Liver: A Proof-of-Concept Study.

Authors:  Ulf Titze; Karl-Dietrich Sievert; Barbara Titze; Birte Schulz; Heiko Schlieker; Zsolt Madarasz; Christian Weise; Torsten Hansen
Journal:  Cancers (Basel)       Date:  2022-01-25       Impact factor: 6.639

Review 4.  Nonalcoholic Fatty Liver Disease (NAFLD): Pathogenesis and Noninvasive Diagnosis.

Authors:  Vicneswarry Dorairaj; Siti Aishah Sulaiman; Nadiah Abu; Nor Azian Abdul Murad
Journal:  Biomedicines       Date:  2021-12-22
  4 in total

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