Literature DB >> 25593676

Recognizing patterns of visual field loss using unsupervised machine learning.

Siamak Yousefi1, Michael H Goldbaum1, Linda M Zangwill1, Felipe A Medeiros1, Christopher Bowd1.   

Abstract

Glaucoma is a potentially blinding optic neuropathy that results in a decrease in visual sensitivity. Visual field abnormalities (decreased visual sensitivity on psychophysical tests) are the primary means of glaucoma diagnosis. One form of visual field testing is Frequency Doubling Technology (FDT) that tests sensitivity at 52 points within the visual field. Like other psychophysical tests used in clinical practice, FDT results yield specific patterns of defect indicative of the disease. We used Gaussian Mixture Model with Expectation Maximization (GEM), (EM is used to estimate the model parameters) to automatically separate FDT data into clusters of normal and abnormal eyes. Principal component analysis (PCA) was used to decompose each cluster into different axes (patterns). FDT measurements were obtained from 1,190 eyes with normal FDT results and 786 eyes with abnormal (i.e., glaucomatous) FDT results, recruited from a university-based, longitudinal, multi-center, clinical study on glaucoma. The GEM input was the 52-point FDT threshold sensitivities for all eyes. The optimal GEM model separated the FDT fields into 3 clusters. Cluster 1 contained 94% normal fields (94% specificity) and clusters 2 and 3 combined, contained 77% abnormal fields (77% sensitivity). For clusters 1, 2 and 3 the optimal number of PCA-identified axes were 2, 2 and 5, respectively. GEM with PCA successfully separated FDT fields from healthy and glaucoma eyes and identified familiar glaucomatous patterns of loss.

Entities:  

Keywords:  glaucoma; machine learning; pattern recognition; unsupervised clustering; visual field loss

Year:  2014        PMID: 25593676      PMCID: PMC4292883          DOI: 10.1117/12.2043145

Source DB:  PubMed          Journal:  Proc SPIE Int Soc Opt Eng        ISSN: 0277-786X


  27 in total

1.  Development of efficient threshold strategies for frequency doubling technology perimetry using computer simulation.

Authors:  Andrew Turpin; Allison M McKendrick; Chris A Johnson; Algis J Vingrys
Journal:  Invest Ophthalmol Vis Sci       Date:  2002-02       Impact factor: 4.799

Review 2.  Machine learning for medical diagnosis: history, state of the art and perspective.

Authors:  I Kononenko
Journal:  Artif Intell Med       Date:  2001-08       Impact factor: 5.326

3.  Separation of preterm infection model from normal pregnancy in mice using texture analysis of second harmonic generation images.

Authors:  S Yousefi; N Kehtarnavaz; M Akins; K Luby-Phelps; M Mahendroo
Journal:  Annu Int Conf IEEE Eng Med Biol Soc       Date:  2010

4.  Visual field defects in early open angle glaucoma.

Authors:  M F Armaly
Journal:  Trans Am Ophthalmol Soc       Date:  1971

5.  The early field defects in glaucoma.

Authors:  S M Drance
Journal:  Invest Ophthalmol       Date:  1969-02

6.  The number of people with glaucoma worldwide in 2010 and 2020.

Authors:  H A Quigley; A T Broman
Journal:  Br J Ophthalmol       Date:  2006-03       Impact factor: 4.638

7.  Interpretation of automated perimetry for glaucoma by neural network.

Authors:  M H Goldbaum; P A Sample; H White; B Côlt; P Raphaelian; R D Fechtner; R N Weinreb
Journal:  Invest Ophthalmol Vis Sci       Date:  1994-08       Impact factor: 4.799

8.  Patterns of visual field defects in chronic angle-closure glaucoma with different disease severity.

Authors:  Ling-Ing Lau; Catherine Jui-ling Liu; Joe Ching-Kuang Chou; Wen-Ming Hsu; Jorn-Hon Liu
Journal:  Ophthalmology       Date:  2003-10       Impact factor: 12.079

9.  Glaucomatous patterns in Frequency Doubling Technology (FDT) perimetry data identified by unsupervised machine learning classifiers.

Authors:  Christopher Bowd; Robert N Weinreb; Madhusudhanan Balasubramanian; Intae Lee; Giljin Jang; Siamak Yousefi; Linda M Zangwill; Felipe A Medeiros; Christopher A Girkin; Jeffrey M Liebmann; Michael H Goldbaum
Journal:  PLoS One       Date:  2014-01-30       Impact factor: 3.240

10.  Using unsupervised learning with variational bayesian mixture of factor analysis to identify patterns of glaucomatous visual field defects.

Authors:  Pamela A Sample; Kwokleung Chan; Catherine Boden; Te-Won Lee; Eytan Z Blumenthal; Robert N Weinreb; Antje Bernd; John Pascual; Jiucang Hao; Terrence Sejnowski; Michael H Goldbaum
Journal:  Invest Ophthalmol Vis Sci       Date:  2004-08       Impact factor: 4.799

View more
  9 in total

1.  Monitoring Glaucomatous Functional Loss Using an Artificial Intelligence-Enabled Dashboard.

Authors:  Siamak Yousefi; Tobias Elze; Louis R Pasquale; Osamah Saeedi; Mengyu Wang; Lucy Q Shen; Sarah R Wellik; Carlos G De Moraes; Jonathan S Myers; Michael V Boland
Journal:  Ophthalmology       Date:  2020-03-10       Impact factor: 12.079

2.  An Objective and Easy-to-Use Glaucoma Functional Severity Staging System Based on Artificial Intelligence.

Authors:  Xiaoqin Huang; Fatemeh Saki; Mengyu Wang; Tobias Elze; Michael V Boland; Louis R Pasquale; Chris A Johnson; Siamak Yousefi
Journal:  J Glaucoma       Date:  2022-06-03       Impact factor: 2.290

3.  Detecting glaucomatous change in visual fields: Analysis with an optimization framework.

Authors:  Siamak Yousefi; Michael H Goldbaum; Ehsan S Varnousfaderani; Akram Belghith; Tzyy-Ping Jung; Felipe A Medeiros; Linda M Zangwill; Robert N Weinreb; Jeffrey M Liebmann; Christopher A Girkin; Christopher Bowd
Journal:  J Biomed Inform       Date:  2015-10-09       Impact factor: 6.317

4.  Prediction of Visual Field Progression from OCT Structural Measures in Moderate to Advanced Glaucoma.

Authors:  Kouros Nouri-Mahdavi; Vahid Mohammadzadeh; Alessandro Rabiolo; Kiumars Edalati; Joseph Caprioli; Siamak Yousefi
Journal:  Am J Ophthalmol       Date:  2021-01-30       Impact factor: 5.488

5.  Convex Representations Using Deep Archetypal Analysis for Predicting Glaucoma.

Authors:  Anshul Thakur; Michael Goldbaum; Siamak Yousefi
Journal:  IEEE J Transl Eng Health Med       Date:  2020-05-28

6.  Unsupervised Gaussian Mixture-Model With Expectation Maximization for Detecting Glaucomatous Progression in Standard Automated Perimetry Visual Fields.

Authors:  Siamak Yousefi; Madhusudhanan Balasubramanian; Michael H Goldbaum; Felipe A Medeiros; Linda M Zangwill; Robert N Weinreb; Jeffrey M Liebmann; Christopher A Girkin; Christopher Bowd
Journal:  Transl Vis Sci Technol       Date:  2016-05-03       Impact factor: 3.283

7.  Retinal Nerve Fiber Layer Features Identified by Unsupervised Machine Learning on Optical Coherence Tomography Scans Predict Glaucoma Progression.

Authors:  Mark Christopher; Akram Belghith; Robert N Weinreb; Christopher Bowd; Michael H Goldbaum; Luke J Saunders; Felipe A Medeiros; Linda M Zangwill
Journal:  Invest Ophthalmol Vis Sci       Date:  2018-06-01       Impact factor: 4.799

8.  Development of a new algorithm based on FDT Matrix perimetry and SD-OCT to improve early glaucoma detection in primary care.

Authors:  Angela Morejon; Agustin Mayo-Iscar; Raul Martin; Fernando Ussa
Journal:  Clin Ophthalmol       Date:  2018-12-27

9.  Unsupervised learning for large-scale corneal topography clustering.

Authors:  Pierre Zéboulon; Guillaume Debellemanière; Damien Gatinel
Journal:  Sci Rep       Date:  2020-10-12       Impact factor: 4.379

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.