Literature DB >> 25590813

Structure-activity relationship for the oxadiazole class of antibiotics.

Edward Spink1, Derong Ding, Zhihong Peng, Marc A Boudreau, Erika Leemans, Elena Lastochkin, Wei Song, Katerina Lichtenwalter, Peter I O'Daniel, Sebastian A Testero, Hualiang Pi, Valerie A Schroeder, William R Wolter, Nuno T Antunes, Mark A Suckow, Sergei Vakulenko, Mayland Chang, Shahriar Mobashery.   

Abstract

The structure-activity relationship (SAR) for the newly discovered oxadiazole class of antibiotics is described with evaluation of 120 derivatives of the lead structure. This class of antibiotics was discovered by in silico docking and scoring against the crystal structure of a penicillin-binding protein. They impair cell-wall biosynthesis and exhibit activities against the Gram-positive bacterium Staphylococcus aureus, including methicillin-resistant S. aureus (MRSA) and vancomycin-resistant and linezolid-resistant S. aureus. 5-(1H-Indol-5-yl)-3-(4-(4-(trifluoromethyl)phenoxy)phenyl)-1,2,4-oxadiazole (antibiotic 75b) was efficacious in a mouse model of MRSA infection, exhibiting a long half-life, a high volume of distribution, and low clearance. This antibiotic is bactericidal and is orally bioavailable in mice. This class of antibiotics holds great promise in recourse against infections by MRSA.

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Year:  2015        PMID: 25590813      PMCID: PMC6863074          DOI: 10.1021/jm501661f

Source DB:  PubMed          Journal:  J Med Chem        ISSN: 0022-2623            Impact factor:   7.446


  25 in total

1.  Resistance studies with daptomycin.

Authors:  J A Silverman; N Oliver; T Andrew; T Li
Journal:  Antimicrob Agents Chemother       Date:  2001-06       Impact factor: 5.191

2.  Predicting plasma protein binding of drugs: a new approach.

Authors:  Nicole A Kratochwil; Walter Huber; Francis Müller; Manfred Kansy; Paul R Gerber
Journal:  Biochem Pharmacol       Date:  2002-11-01       Impact factor: 5.858

3.  Extra precision glide: docking and scoring incorporating a model of hydrophobic enclosure for protein-ligand complexes.

Authors:  Richard A Friesner; Robert B Murphy; Matthew P Repasky; Leah L Frye; Jeremy R Greenwood; Thomas A Halgren; Paul C Sanschagrin; Daniel T Mainz
Journal:  J Med Chem       Date:  2006-10-19       Impact factor: 7.446

4.  Impact of pH on plasma protein binding in equilibrium dialysis.

Authors:  Christopher J Kochansky; Daniel R McMasters; Ping Lu; Kenneth A Koeplinger; Haley H Kerr; Magang Shou; Kenneth R Korzekwa
Journal:  Mol Pharm       Date:  2008-03-18       Impact factor: 4.939

5.  Linezolid resistance in a clinical isolate of Staphylococcus aureus.

Authors:  S Tsiodras; H S Gold; G Sakoulas; G M Eliopoulos; C Wennersten; L Venkataraman; R C Moellering; M J Ferraro
Journal:  Lancet       Date:  2001-07-21       Impact factor: 79.321

6.  Resistance to linezolid: characterization of mutations in rRNA and comparison of their occurrences in vancomycin-resistant enterococci.

Authors:  J Prystowsky; F Siddiqui; J Chosay; D L Shinabarger; J Millichap; L R Peterson; G A Noskin
Journal:  Antimicrob Agents Chemother       Date:  2001-07       Impact factor: 5.191

7.  Characterization of methicillin-resistant Staphylococcus aureus displaying increased MICs of ceftaroline.

Authors:  Rodrigo E Mendes; Athanassios Tsakris; Helio S Sader; Ronald N Jones; Donald Biek; Pamela McGhee; Peter C Appelbaum; Klaudia Kosowska-Shick
Journal:  J Antimicrob Chemother       Date:  2012-03-07       Impact factor: 5.790

8.  Bactericidal activity of orally available agents against methicillin-resistant Staphylococcus aureus.

Authors:  Anjum S Kaka; Adriana M Rueda; Samuel A Shelburne; Kristina Hulten; Richard J Hamill; Daniel M Musher
Journal:  J Antimicrob Chemother       Date:  2006-07-12       Impact factor: 5.790

9.  Experimental infection with Streptococcus pneumoniae in mice: correlation of in vitro activity and pharmacokinetic parameters with in vivo effect for 14 cephalosporins.

Authors:  N Frimodt-Møller; M W Bentzon; V F Thomsen
Journal:  J Infect Dis       Date:  1986-09       Impact factor: 5.226

10.  AutoDock4 and AutoDockTools4: Automated docking with selective receptor flexibility.

Authors:  Garrett M Morris; Ruth Huey; William Lindstrom; Michel F Sanner; Richard K Belew; David S Goodsell; Arthur J Olson
Journal:  J Comput Chem       Date:  2009-12       Impact factor: 3.376

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  19 in total

1.  In Vitro and In Vivo Synergy of the Oxadiazole Class of Antibacterials with β-Lactams.

Authors:  Jeshina Janardhanan; Jayda E Meisel; Derong Ding; Valerie A Schroeder; William R Wolter; Shahriar Mobashery; Mayland Chang
Journal:  Antimicrob Agents Chemother       Date:  2016-08-22       Impact factor: 5.191

2.  Endless Resistance. Endless Antibiotics?

Authors:  Jed F Fisher; Shahriar Mobashery
Journal:  Medchemcomm       Date:  2015-11-03       Impact factor: 3.597

Review 3.  Constructing and deconstructing the bacterial cell wall.

Authors:  Jed F Fisher; Shahriar Mobashery
Journal:  Protein Sci       Date:  2019-11-20       Impact factor: 6.725

4.  Exploration of the structure-activity relationship of 1,2,4-oxadiazole antibiotics.

Authors:  Derong Ding; Marc A Boudreau; Erika Leemans; Edward Spink; Takao Yamaguchi; Sebastian A Testero; Peter I O'Daniel; Elena Lastochkin; Mayland Chang; Shahriar Mobashery
Journal:  Bioorg Med Chem Lett       Date:  2015-06-18       Impact factor: 2.823

5.  Unconventional Antibacterials and Adjuvants.

Authors:  Mayland Chang; Kiran V Mahasenan; Juan A Hermoso; Shahriar Mobashery
Journal:  Acc Chem Res       Date:  2021-01-29       Impact factor: 22.384

Review 6.  The oxadiazole antibacterials.

Authors:  Jeshina Janardhanan; Mayland Chang; Shahriar Mobashery
Journal:  Curr Opin Microbiol       Date:  2016-05-27       Impact factor: 7.934

7.  Three-dimensional QSAR analysis and design of new 1,2,4-oxadiazole antibacterials.

Authors:  Erika Leemans; Kiran V Mahasenan; Malika Kumarasiri; Edward Spink; Derong Ding; Peter I O'Daniel; Marc A Boudreau; Elena Lastochkin; Sebastian A Testero; Takao Yamaguchi; Mijoon Lee; Dusan Hesek; Jed F Fisher; Mayland Chang; Shahriar Mobashery
Journal:  Bioorg Med Chem Lett       Date:  2015-12-12       Impact factor: 2.823

8.  Structure-Activity Relationship for the Oxadiazole Class of Antibacterials.

Authors:  Marc A Boudreau; Derong Ding; Jayda E Meisel; Jeshina Janardhanan; Edward Spink; Zhihong Peng; Yuanyuan Qian; Takao Yamaguchi; Sebastian A Testero; Peter I O'Daniel; Erika Leemans; Elena Lastochkin; Wei Song; Valerie A Schroeder; William R Wolter; Mark A Suckow; Shahriar Mobashery; Mayland Chang
Journal:  ACS Med Chem Lett       Date:  2019-10-03       Impact factor: 4.345

9.  Activities of Oxadiazole Antibacterials against Staphylococcus aureus and Other Gram-Positive Bacteria.

Authors:  Sara Ceballos; Choon Kim; Derong Ding; Shahriar Mobashery; Mayland Chang; Carmen Torres
Journal:  Antimicrob Agents Chemother       Date:  2018-07-27       Impact factor: 5.191

10.  Discovery of Pyrrolidine-2,3-diones as Novel Inhibitors of P. aeruginosa PBP3.

Authors:  Arancha López-Pérez; Stefan Freischem; Immanuel Grimm; Oliver Weiergräber; Andrew J Dingley; María Pascual López-Alberca; Herbert Waldmann; Waldemar Vollmer; Kamal Kumar; Cuong Vuong
Journal:  Antibiotics (Basel)       Date:  2021-05-04
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