Literature DB >> 25580184

ELUCIDATING BRAIN CONNECTIVITY NETWORKS IN MAJOR DEPRESSIVE DISORDER USING CLASSIFICATION-BASED SCORING.

Matthew D Sacchet1, Gautam Prasad2, Lara C Foland-Ross3, Paul M Thompson4, Ian H Gotlib1.   

Abstract

Graph theory is increasingly used in the field of neuroscience to understand the large-scale network structure of the human brain. There is also considerable interest in applying machine learning techniques in clinical settings, for example, to make diagnoses or predict treatment outcomes. Here we used support-vector machines (SVMs), in conjunction with whole-brain tractography, to identify graph metrics that best differentiate individuals with Major Depressive Disorder (MDD) from nondepressed controls. To do this, we applied a novel feature-scoring procedure that incorporates iterative classifier performance to assess feature robustness. We found that small-worldness, a measure of the balance between global integration and local specialization, most reliably differentiated MDD from nondepressed individuals. Post-hoc regional analyses suggested that heightened connectivity of the subcallosal cingulate gyrus (SCG) in MDDs contributes to these differences. The current study provides a novel way to assess the robustness of classification features and reveals anomalies in large-scale neural networks in MDD.

Entities:  

Keywords:  Major Depressive Disorder (MDD); graph theoretical analysis; machine learning; small-world; support vector machine (SVM)

Year:  2014        PMID: 25580184      PMCID: PMC4287315          DOI: 10.1109/ISBI.2014.6867855

Source DB:  PubMed          Journal:  Proc IEEE Int Symp Biomed Imaging        ISSN: 1945-7928


  13 in total

Review 1.  The subcallosal cingulate gyrus in the context of major depression.

Authors:  Clement Hamani; Helen Mayberg; Scellig Stone; Adrian Laxton; Suzanne Haber; Andres M Lozano
Journal:  Biol Psychiatry       Date:  2010-12-08       Impact factor: 13.382

Review 2.  Using Support Vector Machine to identify imaging biomarkers of neurological and psychiatric disease: a critical review.

Authors:  Graziella Orrù; William Pettersson-Yeo; Andre F Marquand; Giuseppe Sartori; Andrea Mechelli
Journal:  Neurosci Biobehav Rev       Date:  2012-01-28       Impact factor: 8.989

3.  Quantitative comparison of algorithms for inter-subject registration of 3D volumetric brain MRI scans.

Authors:  Babak A Ardekani; Stephen Guckemus; Alvin Bachman; Matthew J Hoptman; Michelle Wojtaszek; Jay Nierenberg
Journal:  J Neurosci Methods       Date:  2005-03-15       Impact factor: 2.390

4.  Complex network measures of brain connectivity: uses and interpretations.

Authors:  Mikail Rubinov; Olaf Sporns
Journal:  Neuroimage       Date:  2009-10-09       Impact factor: 6.556

5.  TRACTOGRAPHY DENSITY AND NETWORK MEASURES IN ALZHEIMER'S DISEASE.

Authors:  Gautam Prasad; Talia M Nir; Arthur W Toga; Paul M Thompson
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2013-04

6.  A preliminary study of the dysregulation of the resting networks in first-episode medication-naive adolescent depression.

Authors:  Chenwang Jin; Chengge Gao; Ce Chen; Shaohui Ma; Rana Netra; Yuan Wang; Ming Zhang; Dan Li
Journal:  Neurosci Lett       Date:  2011-08-17       Impact factor: 3.046

7.  Anomalous gray matter structural networks in major depressive disorder.

Authors:  Manpreet K Singh; Shelli R Kesler; S M Hadi Hosseini; Ryan G Kelley; Debha Amatya; J Paul Hamilton; Michael C Chen; Ian H Gotlib
Journal:  Biol Psychiatry       Date:  2013-04-18       Impact factor: 13.382

Review 8.  FSL.

Authors:  Mark Jenkinson; Christian F Beckmann; Timothy E J Behrens; Mark W Woolrich; Stephen M Smith
Journal:  Neuroimage       Date:  2011-09-16       Impact factor: 6.556

9.  Evaluation of 14 nonlinear deformation algorithms applied to human brain MRI registration.

Authors:  Arno Klein; Jesper Andersson; Babak A Ardekani; John Ashburner; Brian Avants; Ming-Chang Chiang; Gary E Christensen; D Louis Collins; James Gee; Pierre Hellier; Joo Hyun Song; Mark Jenkinson; Claude Lepage; Daniel Rueckert; Paul Thompson; Tom Vercauteren; Roger P Woods; J John Mann; Ramin V Parsey
Journal:  Neuroimage       Date:  2009-01-13       Impact factor: 6.556

10.  Increased cortical-limbic anatomical network connectivity in major depression revealed by diffusion tensor imaging.

Authors:  Peng Fang; Ling-Li Zeng; Hui Shen; Lubin Wang; Baojuan Li; Li Liu; Dewen Hu
Journal:  PLoS One       Date:  2012-09-26       Impact factor: 3.240

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  6 in total

1.  Psychoradiological patterns of small-world properties and a systematic review of connectome studies of patients with 6 major psychiatric disorders.

Authors:  Xueling Suo; Du Lei; Lei Li; Wenbin Li; Jing Dai; Song Wang; Manxi He; Hongyan Zhu; Graham J Kemp; Qiyong Gong
Journal:  J Psychiatry Neurosci       Date:  2018-06-28       Impact factor: 6.186

Review 2.  Emerging Frontiers of Neuroengineering: A Network Science of Brain Connectivity.

Authors:  Danielle S Bassett; Ankit N Khambhati; Scott T Grafton
Journal:  Annu Rev Biomed Eng       Date:  2017-03-27       Impact factor: 9.590

Review 3.  White Matter-Based Structural Brain Network of Major Depression.

Authors:  Taolin Chen; Ziqi Chen; Qiyong Gong
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

4.  Psychoradiological patterns of small-world properties and a systematic review of connectome studies of patients with 6 major psychiatric disorders

Authors:  Xueling Suo; Du Lei; Lei Li; Wenbin Li; Jing Dai; Song Wang; Manxi He; Hongyan Zhu; Graham J. Kemp; Qiyong Gong
Journal:  J Psychiatry Neurosci       Date:  2018-11-01       Impact factor: 6.186

5.  Positive affect, surprise, and fatigue are correlates of network flexibility.

Authors:  Richard F Betzel; Theodore D Satterthwaite; Joshua I Gold; Danielle S Bassett
Journal:  Sci Rep       Date:  2017-03-31       Impact factor: 4.379

6.  Resting-State Functional Network Scale Effects and Statistical Significance-Based Feature Selection in Machine Learning Classification.

Authors:  Hao Guo; Yao Li; Godfred Kim Mensah; Yong Xu; Junjie Chen; Jie Xiang; Dongwei Chen
Journal:  Comput Math Methods Med       Date:  2019-11-04       Impact factor: 2.238

  6 in total

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