Literature DB >> 25572281

RAG1-mediated ubiquitylation of histone H3 is required for chromosomal V(D)J recombination.

Zimu Deng1, Haifeng Liu1, Xiaolong Liu1.   

Abstract

RAG1 and RAG2 proteins are key components in V(D)J recombination. The core region of RAG1 is capable of catalyzing the recombination reaction; however, the biological function of non-core RAG1 remains largely unknown. Here, we show that in a murine-model carrying the RAG1 ring-finger conserved cysteine residue mutation (C325Y), V(D)J recombination was abrogated at the cleavage step, and this effect was accompanied by decreased mono-ubiquitylation of histone H3. Further analyses suggest that un-ubiquitylated histone H3 restrains RAG1 to the chromatin by interacting with the N-terminal 218 amino acids of RAG1. Our data provide evidence for a model in which ubiquitylation of histone H3 mediated by the ring-finger domain of RAG1 triggers the release of RAG1, thus allowing its transition into the cleavage phase. Collectively, our findings reveal that the non-core region of RAG1 facilitates chromosomal V(D)J recombination in a ubiquitylation-dependent pathway.

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Year:  2015        PMID: 25572281      PMCID: PMC4650572          DOI: 10.1038/cr.2015.1

Source DB:  PubMed          Journal:  Cell Res        ISSN: 1001-0602            Impact factor:   25.617


  36 in total

Review 1.  The RAG proteins and V(D)J recombination: complexes, ends, and transposition.

Authors:  S D Fugmann; A I Lee; P E Shockett; I J Villey; D G Schatz
Journal:  Annu Rev Immunol       Date:  2000       Impact factor: 28.527

2.  Histone acetylation and hSWI/SNF remodeling act in concert to stimulate V(D)J cleavage of nucleosomal DNA.

Authors:  J Kwon; K B Morshead; J R Guyon; R E Kingston; M A Oettinger
Journal:  Mol Cell       Date:  2000-11       Impact factor: 17.970

Review 3.  The mechanism and regulation of chromosomal V(D)J recombination.

Authors:  Craig H Bassing; Wojciech Swat; Frederick W Alt
Journal:  Cell       Date:  2002-04       Impact factor: 41.582

4.  The RAG1 N-terminal domain is an E3 ubiquitin ligase.

Authors:  Vyacheslav Yurchenko; Zhu Xue; Moshe Sadofsky
Journal:  Genes Dev       Date:  2003-03-01       Impact factor: 11.361

5.  Dramatically increased rearrangement and peripheral representation of Vbeta14 driven by the 3'Dbeta1 recombination signal sequence.

Authors:  Cherry Wu; Craig H Bassing; David Jung; Barbara B Woodman; Dan Foy; Frederick W Alt
Journal:  Immunity       Date:  2003-01       Impact factor: 31.745

6.  Increased frequency of aberrant V(D)J recombination products in core RAG-expressing mice.

Authors:  Sadiqur R Talukder; Darryll D Dudley; Frederick W Alt; Yousuke Takahama; Yoshiko Akamatsu
Journal:  Nucleic Acids Res       Date:  2004-08-24       Impact factor: 16.971

Review 7.  Intracellular trafficking of plasmids for gene therapy: mechanisms of cytoplasmic movement and nuclear import.

Authors:  Erin E Vaughan; James V DeGiulio; David A Dean
Journal:  Curr Gene Ther       Date:  2006-12       Impact factor: 4.391

8.  Definition of minimal domains of interaction within the recombination-activating genes 1 and 2 recombinase complex.

Authors:  V Aidinis; D C Dias; C A Gomez; D Bhattacharyya; E Spanopoulou; S Santagata
Journal:  J Immunol       Date:  2000-06-01       Impact factor: 5.422

9.  Localized epigenetic changes induced by DH recombination restricts recombinase to DJH junctions.

Authors:  Ramesh Subrahmanyam; Hansen Du; Irina Ivanova; Tirtha Chakraborty; Yanhong Ji; Yu Zhang; Frederick W Alt; David G Schatz; Ranjan Sen
Journal:  Nat Immunol       Date:  2012-10-28       Impact factor: 25.606

10.  Impaired V(D)J recombination and lymphocyte development in core RAG1-expressing mice.

Authors:  Darryll D Dudley; JoAnn Sekiguchi; Chengming Zhu; Moshe J Sadofsky; Scott Whitlow; Jeffrey DeVido; Robert J Monroe; Craig H Bassing; Frederick W Alt
Journal:  J Exp Med       Date:  2003-10-27       Impact factor: 14.307

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  11 in total

1.  RAG1 targeting in the genome is dominated by chromatin interactions mediated by the non-core regions of RAG1 and RAG2.

Authors:  Yaakov Maman; Grace Teng; Rashu Seth; Steven H Kleinstein; David G Schatz
Journal:  Nucleic Acids Res       Date:  2016-07-19       Impact factor: 16.971

Review 2.  RAG gene defects at the verge of immunodeficiency and immune dysregulation.

Authors:  Anna Villa; Luigi D Notarangelo
Journal:  Immunol Rev       Date:  2019-01       Impact factor: 12.988

3.  Nucleolar localization of RAG1 modulates V(D)J recombination activity.

Authors:  Ryan M Brecht; Catherine C Liu; Helen A Beilinson; Alexandra Khitun; Sarah A Slavoff; David G Schatz
Journal:  Proc Natl Acad Sci U S A       Date:  2020-02-11       Impact factor: 11.205

4.  The RAG1 Ubiquitin Ligase Domain Stimulates Recombination of TCRβ and TCRα Genes and Influences Development of αβ T Cell Lineages.

Authors:  Thomas N Burn; Charline Miot; Scott M Gordon; Erica J Culberson; Tamir Diamond; Portia A Kreiger; Katharina E Hayer; Anamika Bhattacharyya; Jessica M Jones; Craig H Bassing; Edward M Behrens
Journal:  J Immunol       Date:  2022-08-10       Impact factor: 5.426

Review 5.  Riches in RAGs: Revealing the V(D)J Recombinase through High-Resolution Structures.

Authors:  Karla K Rodgers
Journal:  Trends Biochem Sci       Date:  2016-11-05       Impact factor: 13.807

Review 6.  Human RAG mutations: biochemistry and clinical implications.

Authors:  Luigi D Notarangelo; Min-Sung Kim; Jolan E Walter; Yu Nee Lee
Journal:  Nat Rev Immunol       Date:  2016-03-21       Impact factor: 53.106

7.  Recruitment of RAG1 and RAG2 to Chromatinized DNA during V(D)J Recombination.

Authors:  Keerthi Shetty; David G Schatz
Journal:  Mol Cell Biol       Date:  2015-08-24       Impact factor: 4.272

8.  Characterization of an N-Terminal Non-Core Domain of RAG1 Gene Disrupted Syrian Hamster Model Generated by CRISPR Cas9.

Authors:  Jinxin Miao; Baoling Ying; Rong Li; Ann E Tollefson; Jacqueline F Spencer; William S M Wold; Seok-Hwan Song; Il-Keun Kong; Karoly Toth; Yaohe Wang; Zhongde Wang
Journal:  Viruses       Date:  2018-05-06       Impact factor: 5.048

9.  Histone methyltransferase DOT1L controls state-specific identity during B cell differentiation.

Authors:  Muhammad Assad Aslam; Mir Farshid Alemdehy; Eliza Mari Kwesi-Maliepaard; Fitriari Izzatunnisa Muhaimin; Marieta Caganova; Iris N Pardieck; Teun van den Brand; Tibor van Welsem; Iris de Rink; Ji-Ying Song; Elzo de Wit; Ramon Arens; Heinz Jacobs; Fred van Leeuwen
Journal:  EMBO Rep       Date:  2021-01-07       Impact factor: 8.807

10.  RAG Represents a Widespread Threat to the Lymphocyte Genome.

Authors:  Grace Teng; Yaakov Maman; Wolfgang Resch; Min Kim; Arito Yamane; Jason Qian; Kyong-Rim Kieffer-Kwon; Malay Mandal; Yanhong Ji; Eric Meffre; Marcus R Clark; Lindsay G Cowell; Rafael Casellas; David G Schatz
Journal:  Cell       Date:  2015-07-30       Impact factor: 41.582

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