Literature DB >> 25561456

Breast segmentation and density estimation in breast MRI: a fully automatic framework.

Albert Gubern-Mérida, Michiel Kallenberg, Ritse M Mann, Robert Martí, Nico Karssemeijer.   

Abstract

Breast density measurement is an important aspect in breast cancer diagnosis as dense tissue has been related to the risk of breast cancer development. The purpose of this study is to develop a method to automatically compute breast density in breast MRI. The framework is a combination of image processing techniques to segment breast and fibroglandular tissue. Intra- and interpatient signal intensity variability is initially corrected. The breast is segmented by automatically detecting body-breast and air-breast surfaces. Subsequently, fibroglandular tissue is segmented in the breast area using expectation-maximization. A dataset of 50 cases with manual segmentations was used for evaluation. Dice similarity coefficient (DSC), total overlap, false negative fraction (FNF), and false positive fraction (FPF) are used to report similarity between automatic and manual segmentations. For breast segmentation, the proposed approach obtained DSC, total overlap, FNF, and FPF values of 0.94, 0.96, 0.04, and 0.07, respectively. For fibroglandular tissue segmentation, we obtained DSC, total overlap, FNF, and FPF values of 0.80, 0.85, 0.15, and 0.22, respectively. The method is relevant for researchers investigating breast density as a risk factor for breast cancer and all the described steps can be also applied in computer aided diagnosis systems.

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Year:  2015        PMID: 25561456     DOI: 10.1109/JBHI.2014.2311163

Source DB:  PubMed          Journal:  IEEE J Biomed Health Inform        ISSN: 2168-2194            Impact factor:   5.772


  22 in total

1.  Fully Automated Quantitative Estimation of Volumetric Breast Density from Digital Breast Tomosynthesis Images: Preliminary Results and Comparison with Digital Mammography and MR Imaging.

Authors:  Said Pertuz; Elizabeth S McDonald; Susan P Weinstein; Emily F Conant; Despina Kontos
Journal:  Radiology       Date:  2015-10-21       Impact factor: 11.105

Review 2.  Principles and methods for automatic and semi-automatic tissue segmentation in MRI data.

Authors:  Lei Wang; Teodora Chitiboi; Hans Meine; Matthias Günther; Horst K Hahn
Journal:  MAGMA       Date:  2016-01-11       Impact factor: 2.310

3.  Breast density estimation from high spectral and spatial resolution MRI.

Authors:  Hui Li; William A Weiss; Milica Medved; Hiroyuki Abe; Gillian M Newstead; Gregory S Karczmar; Maryellen L Giger
Journal:  J Med Imaging (Bellingham)       Date:  2016-12-28

4.  Automated Segmentation of Tissues Using CT and MRI: A Systematic Review.

Authors:  Leon Lenchik; Laura Heacock; Ashley A Weaver; Robert D Boutin; Tessa S Cook; Jason Itri; Christopher G Filippi; Rao P Gullapalli; James Lee; Marianna Zagurovskaya; Tara Retson; Kendra Godwin; Joey Nicholson; Ponnada A Narayana
Journal:  Acad Radiol       Date:  2019-08-10       Impact factor: 3.173

5.  Fully Automated Convolutional Neural Network Method for Quantification of Breast MRI Fibroglandular Tissue and Background Parenchymal Enhancement.

Authors:  Richard Ha; Peter Chang; Eralda Mema; Simukayi Mutasa; Jenika Karcich; Ralph T Wynn; Michael Z Liu; Sachin Jambawalikar
Journal:  J Digit Imaging       Date:  2019-02       Impact factor: 4.056

6.  A deep learning framework for efficient analysis of breast volume and fibroglandular tissue using MR data with strong artifacts.

Authors:  Tatyana Ivanovska; Thomas G Jentschke; Amro Daboul; Katrin Hegenscheid; Henry Völzke; Florentin Wörgötter
Journal:  Int J Comput Assist Radiol Surg       Date:  2019-03-06       Impact factor: 2.924

7.  Quantitative Volumetric K-Means Cluster Segmentation of Fibroglandular Tissue and Skin in Breast MRI.

Authors:  Anton Niukkanen; Otso Arponen; Aki Nykänen; Amro Masarwah; Anna Sutela; Timo Liimatainen; Ritva Vanninen; Mazen Sudah
Journal:  J Digit Imaging       Date:  2018-08       Impact factor: 4.056

8.  Reproducible automated breast density measure with no ionizing radiation using fat-water decomposition MRI.

Authors:  Jie Ding; Alison T Stopeck; Yi Gao; Marilyn T Marron; Betsy C Wertheim; Maria I Altbach; Jean-Philippe Galons; Denise J Roe; Fang Wang; Gertraud Maskarinec; Cynthia A Thomson; Patricia A Thompson; Chuan Huang
Journal:  J Magn Reson Imaging       Date:  2018-04-06       Impact factor: 4.813

9.  Three-Dimensional Whole Breast Segmentation in Sagittal and Axial Breast MRI With Dense Depth Field Modeling and Localized Self-Adaptation for Chest-Wall Line Detection.

Authors:  Dong Wei; Susan Weinstein; Meng-Kang Hsieh; Lauren Pantalone; Despina Kontos
Journal:  IEEE Trans Biomed Eng       Date:  2018-10-15       Impact factor: 4.538

10.  A level set based framework for quantitative evaluation of breast tissue density from MRI data.

Authors:  Tatyana Ivanovska; René Laqua; Lei Wang; Volkmar Liebscher; Henry Völzke; Katrin Hegenscheid
Journal:  PLoS One       Date:  2014-11-25       Impact factor: 3.240

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