Literature DB >> 25553038

Crystal structure of (Z)-3-{3-(4-chloro-phen-yl)-2-[(4-chloro-phen-yl)imino]-2,3-di-hydro-thia-zol-4-yl}-2H-chromen-2-one.

M Kayalvizhi1, G Vasuki1, R Raj Kumar2, V Rajeswar Rao2.   

Abstract

In the title compound, C24H14Cl2N2O2S, the 2H-chromene ring system is approximately planar, with a maximum deviation of 0.025 (2) Å. The thia-zole ring is almost planar, with an r.m.s. deviation of 0.0022 Å, and makes a dihedral angle of 58.52 (7)° with the chromene ring system. The chromene ring system is inclined at angles of 58.3 (1) and 55.39 (9)° with respect to the two chloro-phenyl rings. The two chloro-phenyl rings show significant deviation from coplanarity, with a dihedral angle between them of 47.69 (8)°. The crystal structure features C-H⋯Cl inter-actions extending in (100) and propagating along the a-axis direction and weak π-π inter-actions [centroid-centroid separation = 3.867 (2) Å].

Entities:  

Keywords:  2H-chromen-2-one; bioactivity; crystal structure; hydrogen bonding; π–π inter­actions

Year:  2014        PMID: 25553038      PMCID: PMC4257461          DOI: 10.1107/S1600536814024775

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the bioactivity of coumarin, see: Yusufzai et al. (2012 ▶). For related structures, see: Arshad, Osman, Chan et al. (2010 ▶); Arshad, Osman, Lam et al. (2010a ▶,b ▶). For synthetic chemistry, medicinal chemistry, photochemistry and solid-state chemistry applications of coumarin derivatives, see: Chopra et al. (2009 ▶). For the synthesis, see: Raj Kumar & Rajeswar Rao (2014 ▶).

Experimental

Crystal data

C24H14Cl2N2O2S M = 465.33 Monoclinic, a = 9.1491 (7) Å b = 10.3099 (8) Å c = 11.9347 (10) Å β = 111.587 (2)° V = 1046.80 (14) Å3 Z = 2 Mo Kα radiation μ = 0.44 mm−1 T = 296 K 0.35 × 0.30 × 0.25 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 1999 ▶) T min = 0.897, T max = 1.000 15409 measured reflections 5549 independent reflections 4070 reflections with I > 2σ(I) R int = 0.024

Refinement

R[F 2 > 2σ(F 2)] = 0.034 wR(F 2) = 0.075 S = 1.03 5549 reflections 280 parameters 1 restraint H-atom parameters constrained Δρmax = 0.17 e Å−3 Δρmin = −0.20 e Å−3 Absolute structure: Flack x determined using 1604 quotients [(I +)−(I −)]/[(I +)+(I −)] (Parsons et al., 2013 ▶) Absolute structure parameter: −0.004 (19)

Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: APEX2 and SAINT (Bruker, 2004 ▶); data reduction: SAINT and XPREP (Bruker, 2004 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶); software used to prepare material for publication: PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) I, global, 206R. DOI: 10.1107/S1600536814024775/zs2320sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814024775/zs2320Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S1600536814024775/zs2320Isup3.cdx Click here for additional data file. Supporting information file. DOI: 10.1107/S1600536814024775/zs2320Isup4.cml Click here for additional data file. . DOI: 10.1107/S1600536814024775/zs2320fig1.tif The mol­ecular structure of the title compound showing atom numbering, with displacement ellipsoids drawn at the 50% probability level. Click here for additional data file. a . DOI: 10.1107/S1600536814024775/zs2320fig2.tif Crystal packing of the title compound in the unit cell, viewed along the a axis, showing C—H⋯Cl inter­actions as dashed lines. Click here for additional data file. . DOI: 10.1107/S1600536814024775/zs2320fig3.tif The partial packing of the title compound, showing the π–π inter­actions. CCDC reference: 1027667 Additional supporting information: crystallographic information; 3D view; checkCIF report
C24H14Cl2N2O2SF(000) = 476
Mr = 465.33Dx = 1.476 Mg m3
Monoclinic, P21Mo Kα radiation, λ = 0.71073 Å
a = 9.1491 (7) ÅCell parameters from 5853 reflections
b = 10.3099 (8) Åθ = 4.8–29.9°
c = 11.9347 (10) ŵ = 0.44 mm1
β = 111.587 (2)°T = 296 K
V = 1046.80 (14) Å3Block, colourless
Z = 20.35 × 0.30 × 0.25 mm
Bruker Kappa APEXII CCD diffractometer5549 independent reflections
Radiation source: fine-focus sealed tube4070 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.024
ω and φ scansθmax = 30.2°, θmin = 2.4°
Absorption correction: multi-scan (SADABS; Bruker, 1999)h = −12→12
Tmin = 0.897, Tmax = 1.000k = −13→14
15409 measured reflectionsl = −16→16
Refinement on F2Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: fullH-atom parameters constrained
R[F2 > 2σ(F2)] = 0.034w = 1/[σ2(Fo2) + (0.0251P)2 + 0.1767P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.075(Δ/σ)max < 0.001
S = 1.03Δρmax = 0.17 e Å3
5549 reflectionsΔρmin = −0.20 e Å3
280 parametersAbsolute structure: Flack x determined using 1604 quotients [(I+)-(I-)]/[(I+)+(I-)] (Parsons et al., 2013)
1 restraintAbsolute structure parameter: −0.004 (19)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
xyzUiso*/Ueq
Cl10.73427 (9)0.67172 (10)1.28483 (6)0.0611 (2)
Cl20.07802 (15)0.15926 (9)0.32829 (9)0.0911 (3)
S10.42551 (10)0.84490 (8)0.71595 (7)0.0526 (2)
O10.2030 (2)0.7096 (2)0.17243 (18)0.0552 (6)
O20.3924 (2)0.6405 (2)0.33588 (19)0.0611 (6)
N10.3118 (2)0.6598 (2)0.56482 (18)0.0408 (5)
N20.4358 (3)0.5837 (2)0.7613 (2)0.0536 (7)
C10.2735 (3)0.7030 (3)0.2954 (2)0.0438 (7)
C20.1989 (3)0.7740 (3)0.3656 (2)0.0366 (6)
C30.0669 (3)0.8415 (3)0.3101 (2)0.0386 (6)
H30.01940.88460.35620.046*
C4−0.0030 (3)0.8489 (3)0.1811 (2)0.0392 (6)
C5−0.1396 (4)0.9181 (3)0.1185 (3)0.0511 (8)
H5−0.19120.96310.16070.061*
C6−0.1983 (4)0.9202 (4)−0.0050 (3)0.0606 (9)
H6−0.28930.9667−0.04650.073*
C7−0.1228 (4)0.8536 (4)−0.0675 (3)0.0690 (10)
H7−0.16310.8562−0.15130.083*
C80.0110 (4)0.7834 (4)−0.0087 (3)0.0645 (9)
H80.06110.7378−0.05150.077*
C90.0692 (3)0.7822 (3)0.1157 (2)0.0452 (7)
C100.2782 (3)0.7744 (3)0.4978 (2)0.0379 (6)
C110.3305 (4)0.8795 (3)0.5646 (3)0.0462 (7)
H110.31740.96320.53330.055*
C120.3931 (3)0.6762 (3)0.6869 (2)0.0428 (6)
C130.5081 (3)0.6096 (3)0.8852 (3)0.0453 (7)
C140.6503 (4)0.5525 (3)0.9501 (3)0.0551 (8)
H140.69920.50050.91060.066*
C150.7211 (4)0.5712 (3)1.0723 (3)0.0559 (9)
H150.81780.53301.11490.067*
C160.6480 (3)0.6468 (3)1.1310 (2)0.0422 (6)
C170.5071 (3)0.7039 (3)1.0692 (3)0.0531 (8)
H170.45840.75541.10920.064*
C180.4369 (3)0.6845 (4)0.9460 (3)0.0556 (8)
H180.34020.72270.90360.067*
C190.1469 (4)0.3047 (3)0.4032 (3)0.0506 (8)
C200.3036 (4)0.3174 (3)0.4712 (3)0.0536 (8)
H200.37230.24850.47920.064*
C210.3576 (4)0.4336 (3)0.5275 (3)0.0492 (8)
H210.46360.44370.57450.059*
C220.2553 (3)0.5348 (3)0.5145 (2)0.0377 (6)
C230.0977 (3)0.5194 (3)0.4499 (3)0.0443 (7)
H230.02850.58710.44480.053*
C240.0419 (4)0.4032 (3)0.3925 (3)0.0527 (8)
H24−0.06450.39200.34760.063*
U11U22U33U12U13U23
Cl10.0589 (4)0.0805 (6)0.0361 (4)−0.0094 (4)0.0086 (3)0.0030 (4)
Cl20.1509 (9)0.0438 (4)0.0690 (6)−0.0333 (6)0.0292 (6)−0.0135 (5)
S10.0634 (5)0.0460 (4)0.0382 (4)−0.0074 (4)0.0069 (3)−0.0095 (3)
O10.0514 (11)0.0756 (15)0.0401 (11)0.0026 (11)0.0187 (10)−0.0100 (10)
O20.0481 (12)0.0787 (17)0.0577 (13)0.0119 (12)0.0209 (10)−0.0019 (12)
N10.0441 (12)0.0374 (11)0.0330 (11)−0.0043 (11)0.0050 (9)−0.0020 (11)
N20.0641 (17)0.0458 (15)0.0380 (13)−0.0036 (12)0.0037 (12)−0.0006 (11)
C10.0427 (15)0.0492 (16)0.0404 (15)−0.0036 (14)0.0162 (13)−0.0047 (13)
C20.0404 (15)0.0341 (13)0.0357 (14)−0.0053 (12)0.0144 (12)−0.0038 (11)
C30.0476 (15)0.0300 (12)0.0390 (14)−0.0045 (13)0.0170 (12)−0.0054 (12)
C40.0445 (14)0.0337 (13)0.0367 (13)−0.0076 (13)0.0117 (12)−0.0020 (12)
C50.0561 (19)0.0434 (16)0.0460 (17)0.0003 (14)0.0096 (15)0.0001 (14)
C60.063 (2)0.058 (2)0.0460 (18)0.0005 (17)0.0026 (16)0.0053 (16)
C70.078 (2)0.082 (2)0.0355 (16)−0.005 (2)0.0079 (17)0.0021 (19)
C80.066 (2)0.088 (3)0.0402 (17)−0.007 (2)0.0208 (16)−0.0091 (18)
C90.0461 (16)0.0518 (17)0.0372 (15)−0.0077 (14)0.0146 (13)−0.0026 (13)
C100.0371 (14)0.0396 (15)0.0352 (14)−0.0007 (12)0.0112 (12)−0.0027 (12)
C110.0566 (19)0.0402 (17)0.0398 (16)−0.0039 (13)0.0154 (14)−0.0043 (12)
C120.0399 (13)0.0471 (17)0.0370 (14)−0.0047 (14)0.0090 (11)−0.0071 (14)
C130.0475 (16)0.0430 (15)0.0381 (15)−0.0052 (13)0.0069 (13)0.0019 (13)
C140.066 (2)0.0477 (17)0.0456 (17)0.0145 (16)0.0142 (16)0.0030 (14)
C150.0490 (18)0.061 (2)0.0464 (18)0.0120 (15)0.0039 (15)0.0077 (15)
C160.0402 (14)0.0489 (16)0.0332 (13)−0.0061 (13)0.0086 (11)0.0064 (13)
C170.0462 (16)0.072 (2)0.0430 (16)0.0079 (16)0.0182 (13)0.0052 (15)
C180.0384 (14)0.081 (2)0.0429 (16)0.0096 (17)0.0095 (13)0.0070 (18)
C190.079 (2)0.0358 (15)0.0362 (15)−0.0115 (15)0.0207 (15)−0.0025 (12)
C200.072 (2)0.0378 (17)0.0506 (18)0.0081 (14)0.0218 (17)0.0017 (13)
C210.0434 (17)0.0474 (18)0.0496 (18)0.0029 (14)0.0089 (14)−0.0011 (14)
C220.0441 (16)0.0356 (14)0.0315 (13)−0.0028 (12)0.0118 (12)−0.0021 (11)
C230.0390 (15)0.0445 (17)0.0459 (16)−0.0006 (12)0.0114 (13)−0.0011 (13)
C240.0486 (17)0.0565 (19)0.0447 (17)−0.0186 (16)0.0075 (14)0.0003 (15)
Cl1—C161.731 (3)C8—C91.380 (4)
Cl2—C191.741 (3)C8—H80.9300
S1—C111.729 (3)C10—C111.326 (4)
S1—C121.777 (3)C11—H110.9300
O1—C11.371 (3)C13—C181.376 (4)
O1—C91.382 (4)C13—C141.378 (4)
O2—C11.203 (3)C14—C151.374 (4)
N1—C121.381 (3)C14—H140.9300
N1—C101.396 (4)C15—C161.375 (4)
N1—C221.436 (3)C15—H150.9300
N2—C121.263 (4)C16—C171.362 (4)
N2—C131.406 (4)C17—C181.386 (4)
C1—C21.457 (4)C17—H170.9300
C2—C31.339 (4)C18—H180.9300
C2—C101.474 (4)C19—C201.369 (5)
C3—C41.435 (3)C19—C241.371 (5)
C3—H30.9300C20—C211.373 (4)
C4—C91.378 (4)C20—H200.9300
C4—C51.394 (4)C21—C221.371 (4)
C5—C61.371 (4)C21—H210.9300
C5—H50.9300C22—C231.371 (4)
C6—C71.372 (5)C23—C241.381 (4)
C6—H60.9300C23—H230.9300
C7—C81.372 (5)C24—H240.9300
C7—H70.9300
C11—S1—C1290.84 (13)N2—C12—N1123.8 (3)
C1—O1—C9122.3 (2)N2—C12—S1128.0 (2)
C12—N1—C10114.9 (2)N1—C12—S1108.2 (2)
C12—N1—C22121.5 (2)C18—C13—C14118.4 (3)
C10—N1—C22123.41 (19)C18—C13—N2122.1 (3)
C12—N2—C13120.0 (3)C14—C13—N2119.4 (3)
O2—C1—O1117.1 (3)C15—C14—C13121.0 (3)
O2—C1—C2125.8 (3)C15—C14—H14119.5
O1—C1—C2117.1 (2)C13—C14—H14119.5
C3—C2—C1120.3 (2)C14—C15—C16119.5 (3)
C3—C2—C10121.8 (2)C14—C15—H15120.2
C1—C2—C10117.8 (2)C16—C15—H15120.2
C2—C3—C4121.5 (3)C17—C16—C15120.7 (3)
C2—C3—H3119.2C17—C16—Cl1118.8 (2)
C4—C3—H3119.2C15—C16—Cl1120.5 (2)
C9—C4—C5118.3 (3)C16—C17—C18119.2 (3)
C9—C4—C3117.6 (2)C16—C17—H17120.4
C5—C4—C3124.1 (3)C18—C17—H17120.4
C6—C5—C4120.2 (3)C13—C18—C17121.1 (3)
C6—C5—H5119.9C13—C18—H18119.5
C4—C5—H5119.9C17—C18—H18119.5
C5—C6—C7120.0 (3)C20—C19—C24121.9 (3)
C5—C6—H6120.0C20—C19—Cl2119.3 (3)
C7—C6—H6120.0C24—C19—Cl2118.7 (3)
C6—C7—C8121.2 (3)C19—C20—C21118.9 (3)
C6—C7—H7119.4C19—C20—H20120.5
C8—C7—H7119.4C21—C20—H20120.5
C7—C8—C9118.3 (3)C22—C21—C20120.0 (3)
C7—C8—H8120.9C22—C21—H21120.0
C9—C8—H8120.9C20—C21—H21120.0
C4—C9—C8122.0 (3)C23—C22—C21120.6 (3)
C4—C9—O1121.1 (2)C23—C22—N1118.7 (2)
C8—C9—O1117.0 (3)C21—C22—N1120.7 (2)
C11—C10—N1113.1 (2)C22—C23—C24120.0 (3)
C11—C10—C2124.9 (3)C22—C23—H23120.0
N1—C10—C2121.9 (2)C24—C23—H23120.0
C10—C11—S1113.0 (2)C19—C24—C23118.5 (3)
C10—C11—H11123.5C19—C24—H24120.7
S1—C11—H11123.5C23—C24—H24120.7
C9—O1—C1—O2−177.6 (3)C13—N2—C12—N1−175.3 (3)
C9—O1—C1—C21.5 (4)C13—N2—C12—S15.4 (4)
O2—C1—C2—C3179.3 (3)C10—N1—C12—N2−178.8 (3)
O1—C1—C2—C30.3 (4)C22—N1—C12—N26.4 (4)
O2—C1—C2—C102.7 (4)C10—N1—C12—S10.5 (3)
O1—C1—C2—C10−176.4 (2)C22—N1—C12—S1−174.3 (2)
C1—C2—C3—C4−1.5 (4)C11—S1—C12—N2178.9 (3)
C10—C2—C3—C4175.0 (2)C11—S1—C12—N1−0.4 (2)
C2—C3—C4—C91.0 (4)C12—N2—C13—C1856.7 (4)
C2—C3—C4—C5−179.7 (3)C12—N2—C13—C14−127.2 (3)
C9—C4—C5—C6−0.7 (4)C18—C13—C14—C15−1.0 (5)
C3—C4—C5—C6179.9 (3)N2—C13—C14—C15−177.2 (3)
C4—C5—C6—C70.2 (5)C13—C14—C15—C160.8 (5)
C5—C6—C7—C80.5 (6)C14—C15—C16—C17−0.5 (5)
C6—C7—C8—C9−0.6 (6)C14—C15—C16—Cl1179.9 (3)
C5—C4—C9—C80.6 (4)C15—C16—C17—C180.4 (5)
C3—C4—C9—C8−180.0 (3)Cl1—C16—C17—C18−180.0 (3)
C5—C4—C9—O1−178.6 (3)C14—C13—C18—C170.9 (5)
C3—C4—C9—O10.8 (4)N2—C13—C18—C17177.0 (3)
C7—C8—C9—C40.1 (5)C16—C17—C18—C13−0.6 (5)
C7—C8—C9—O1179.3 (3)C24—C19—C20—C21−1.9 (5)
C1—O1—C9—C4−2.0 (4)Cl2—C19—C20—C21178.3 (2)
C1—O1—C9—C8178.7 (3)C19—C20—C21—C22−0.4 (5)
C12—N1—C10—C11−0.4 (3)C20—C21—C22—C233.0 (5)
C22—N1—C10—C11174.3 (3)C20—C21—C22—N1−175.1 (3)
C12—N1—C10—C2177.1 (2)C12—N1—C22—C23122.6 (3)
C22—N1—C10—C2−8.2 (4)C10—N1—C22—C23−51.8 (4)
C3—C2—C10—C11−58.0 (4)C12—N1—C22—C21−59.4 (4)
C1—C2—C10—C11118.6 (3)C10—N1—C22—C21126.3 (3)
C3—C2—C10—N1124.9 (3)C21—C22—C23—C24−3.2 (4)
C1—C2—C10—N1−58.5 (4)N1—C22—C23—C24174.9 (3)
N1—C10—C11—S10.0 (3)C20—C19—C24—C231.7 (5)
C2—C10—C11—S1−177.3 (2)Cl2—C19—C24—C23−178.6 (2)
C12—S1—C11—C100.2 (3)C22—C23—C24—C190.9 (4)
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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-05-26

5.  3-{2-[2-(Diphenyl-methyl-ene)hydrazin-yl]thia-zol-4-yl}-2H-chromen-2-one.

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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-06-26

6.  3-(2-Methyl-amino-1,3-thia-zol-4-yl)-2H-chromen-2-one.

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7.  Use of intensity quotients and differences in absolute structure refinement.

Authors:  Simon Parsons; Howard D Flack; Trixie Wagner
Journal:  Acta Crystallogr B Struct Sci Cryst Eng Mater       Date:  2013-05-17

8.  Structure validation in chemical crystallography.

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Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  8 in total

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