Literature DB >> 21578780

3-(2-Amino-1,3-thia-zol-4-yl)-6-bromo-2H-chromen-2-one.

Deepak Chopra, A R Choudhury, K N Venugopala, Thavendran Govender, Hendrik G Kruger, Glenn E M Maguire, T N Guru Row.   

Abstract

The mol-ecule of the title compound, C(12)H(7)BrN(2)O(2)S, is essentially planar with a maximum deviation of 0.234 (3) Å from the mean plane through all non-H atoms. The dihedral angle between the coumarin ring plane and that of the five-membered thia-zole ring is 12.9 (1)°. In the crystal, strong N-H⋯O, N-H⋯N and weak but highly directional C-H⋯O hydrogen bonds provide the links between the mol-ecules. In addition, C-H⋯π and π-π inter-actions [centroid-centroid distances = 3.950 (3)-4.024 (3) Å] provide additional stability to the inter-layer regions in the lattice.

Entities:  

Year:  2009        PMID: 21578780      PMCID: PMC2971769          DOI: 10.1107/S1600536809046674

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For applications of coumarin compounds in photochemistry, see: Vishnumurthy et al. (2001 ▶). For their roles as dyes or laser dyes, see: Hooper et al. (1982 ▶); Nemkovich et al. (1997 ▶). For graph-set motifs, see: Bernstein et al. (1995 ▶). For the synthesis of the title compound, see: Venugopala et al. (2004 ▶). For related structures see: Vishnumurthy et al. (2001 ▶).

Experimental

Crystal data

C12H7BrN2O2S M = 323.17 Monoclinic, a = 7.031 (4) Å b = 13.804 (8) Å c = 12.453 (7) Å β = 90.047 (9)° V = 1208.6 (12) Å3 Z = 4 Mo Kα radiation μ = 3.57 mm−1 T = 290 K 0.32 × 0.12 × 0.11 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick,1996 ▶) T min = 0.641, T max = 0.675 9232 measured reflections 2431 independent reflections 2017 reflections with I > 2σ(I) R int = 0.019

Refinement

R[F 2 > 2σ(F 2)] = 0.034 wR(F 2) = 0.090 S = 1.03 2431 reflections 163 parameters H-atom parameters constrained Δρmax = 0.54 e Å−3 Δρmin = −0.56 e Å−3 Data collection: SMART (Bruker, 2000 ▶); cell refinement: SAINT (Bruker, 2000 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and CAMERON (Watkin et al., 1993 ▶); software used to prepare material for publication: PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809046674/sj2669sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809046674/sj2669Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C12H7BrN2O2SF(000) = 640
Mr = 323.17Dx = 1.776 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 895 reflections
a = 7.031 (4) Åθ = 1.5–25.8°
b = 13.804 (8) ŵ = 3.57 mm1
c = 12.453 (7) ÅT = 290 K
β = 90.047 (9)°Needle, yellow
V = 1208.6 (12) Å30.32 × 0.12 × 0.11 mm
Z = 4
Bruker SMART CCD area-detector diffractometer2431 independent reflections
Radiation source: fine-focus sealed tube2017 reflections with I > 2σ(I)
graphiteRint = 0.019
φ and ω scansθmax = 26.4°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Sheldrick,1996)h = −8→8
Tmin = 0.641, Tmax = 0.675k = −17→17
9232 measured reflectionsl = −14→15
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.034Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.090H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.0453P)2 + 0.6906P] where P = (Fo2 + 2Fc2)/3
2431 reflections(Δ/σ)max = 0.001
163 parametersΔρmax = 0.54 e Å3
0 restraintsΔρmin = −0.56 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Br10.15344 (4)0.88591 (3)1.08569 (3)0.06615 (15)
S11.40939 (9)0.60168 (5)0.82189 (6)0.04711 (19)
N11.0835 (3)0.61538 (14)0.91596 (17)0.0384 (5)
N21.2684 (4)0.48369 (18)0.9743 (2)0.0507 (6)
O11.0382 (3)0.84207 (14)0.68021 (15)0.0525 (5)
O20.7679 (3)0.88987 (13)0.74985 (15)0.0489 (5)
C10.9241 (4)0.83052 (17)0.7517 (2)0.0407 (6)
C20.9369 (3)0.75986 (16)0.83941 (19)0.0368 (5)
C30.8015 (4)0.75970 (18)0.9159 (2)0.0405 (6)
C40.4977 (4)0.82387 (19)0.9903 (2)0.0445 (6)
C50.3471 (4)0.88597 (19)0.9794 (2)0.0463 (6)
C60.3340 (4)0.9488 (2)0.8935 (3)0.0552 (7)
C70.4756 (4)0.9503 (2)0.8172 (3)0.0560 (7)
C80.6280 (4)0.88711 (17)0.8272 (2)0.0412 (6)
C90.6421 (3)0.82394 (17)0.91312 (19)0.0383 (5)
C101.0974 (3)0.69189 (17)0.84259 (19)0.0373 (5)
C111.2368 (3)0.56253 (17)0.9130 (2)0.0382 (5)
C121.2599 (4)0.6948 (2)0.7847 (2)0.0445 (6)
H2A1.18200.46441.01830.060*
H2B1.37220.45180.96760.060*
H30.81230.71610.97280.048*
H40.50370.78191.04850.053*
H60.23030.99020.88750.066*
H70.46940.99290.75950.068*
H121.28760.74070.73240.053*
U11U22U33U12U13U23
Br10.0496 (2)0.0818 (3)0.0671 (2)0.01305 (15)0.01552 (15)−0.00836 (16)
S10.0350 (3)0.0504 (4)0.0559 (4)0.0006 (3)0.0136 (3)−0.0006 (3)
N10.0351 (10)0.0393 (11)0.0408 (11)0.0034 (8)0.0086 (9)−0.0015 (9)
N20.0430 (13)0.0463 (13)0.0628 (16)0.0119 (11)0.0172 (12)0.0071 (12)
O10.0600 (12)0.0502 (11)0.0474 (11)−0.0031 (9)0.0160 (9)0.0069 (9)
O20.0570 (11)0.0453 (10)0.0445 (10)0.0075 (8)0.0061 (9)0.0110 (8)
C10.0488 (14)0.0358 (12)0.0374 (13)−0.0036 (11)0.0051 (11)−0.0033 (10)
C20.0408 (13)0.0321 (11)0.0374 (12)−0.0021 (10)0.0029 (10)−0.0008 (10)
C30.0445 (14)0.0371 (13)0.0399 (14)0.0044 (10)0.0036 (11)0.0048 (11)
C40.0452 (14)0.0455 (14)0.0429 (14)0.0055 (11)0.0039 (11)0.0011 (12)
C50.0425 (14)0.0498 (15)0.0466 (15)0.0068 (11)0.0029 (12)−0.0077 (12)
C60.0507 (16)0.0538 (17)0.0610 (18)0.0174 (14)−0.0025 (14)0.0001 (14)
C70.0622 (18)0.0512 (17)0.0547 (17)0.0134 (14)−0.0053 (14)0.0085 (14)
C80.0441 (14)0.0401 (13)0.0396 (14)0.0026 (11)0.0024 (11)0.0013 (10)
C90.0409 (13)0.0354 (12)0.0386 (13)0.0031 (10)0.0011 (10)−0.0009 (10)
C100.0396 (12)0.0347 (12)0.0376 (12)−0.0029 (10)0.0045 (10)−0.0026 (10)
C110.0344 (12)0.0380 (12)0.0423 (13)0.0000 (10)0.0064 (10)−0.0054 (10)
C120.0402 (14)0.0444 (14)0.0489 (15)−0.0025 (11)0.0083 (12)0.0036 (12)
Br1—C51.900 (3)C3—C91.431 (4)
S1—C121.722 (3)C3—H30.9300
S1—C111.748 (3)C11—N21.344 (3)
N1—C111.303 (3)C5—C61.379 (4)
N1—C101.399 (3)C2—C11.469 (3)
O2—C11.370 (3)C8—C71.383 (4)
O2—C81.379 (3)C8—C91.384 (4)
C4—C51.369 (4)C6—C71.380 (4)
C4—C91.399 (4)C6—H60.9300
C4—H40.9300C7—H70.9300
O1—C11.209 (3)N2—H2A0.8600
C10—C121.353 (4)N2—H2B0.8600
C10—C21.468 (3)C12—H120.9300
C3—C21.348 (3)
C12—S1—C1188.97 (13)O2—C8—C7118.2 (2)
C11—N1—C10110.3 (2)O2—C8—C9120.4 (2)
C1—O2—C8123.0 (2)C7—C8—C9121.4 (3)
C5—C4—C9119.6 (3)O1—C1—O2116.3 (2)
C5—C4—H4120.2O1—C1—C2126.5 (2)
C9—C4—H4120.2O2—C1—C2117.3 (2)
C12—C10—N1115.4 (2)C5—C6—C7119.7 (3)
C12—C10—C2128.1 (2)C5—C6—H6120.2
N1—C10—C2116.5 (2)C7—C6—H6120.2
C2—C3—C9122.3 (2)C6—C7—C8119.2 (3)
C2—C3—H3118.8C6—C7—H7120.4
C9—C3—H3118.8C8—C7—H7120.4
N1—C11—N2124.9 (2)C8—C9—C4118.6 (2)
N1—C11—S1114.80 (19)C8—C9—C3117.8 (2)
N2—C11—S1120.32 (19)C4—C9—C3123.5 (2)
C4—C5—C6121.4 (3)C11—N2—H2A120.0
C4—C5—Br1119.0 (2)C11—N2—H2B120.0
C6—C5—Br1119.5 (2)H2A—N2—H2B120.0
C3—C2—C10121.5 (2)C10—C12—S1110.5 (2)
C3—C2—C1119.1 (2)C10—C12—H12124.7
C10—C2—C1119.4 (2)S1—C12—H12124.7
D—H···AD—HH···AD···AD—H···A
N2—H2A···N1i0.862.323.141 (4)160
N2—H2B···O1ii0.862.473.058 (3)127
C4—H4···O1iii0.932.383.304 (4)172
C7—H7···Cg1iv0.932.743.587 (4)151
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N2—H2A⋯N1i 0.862.323.141 (4)160
N2—H2B⋯O1ii 0.862.473.058 (3)127
C4—H4⋯O1iii 0.932.383.304 (4)172
C7—H7⋯Cg1iv 0.932.743.587 (4)151

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) . Cg1 is the centroid of the thiazoyl ring.

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