Literature DB >> 21587863

(Z)-3-(2-{2-[1-(4-Hy-droxy-phen-yl)ethyl-idene]hydrazin-1-yl}-1,3-thia-zol-4-yl)-2H-chromen-2-one.

Afsheen Arshad, Hasnah Osman, Chan Kit Lam, Ching Kheng Quah, Hoong-Kun Fun.   

Abstract

In the title compound, C(20)H(15)N(3)O(3)S, an intra-molecular C-H⋯O hydrogen bond generates an S(6) ring motif. The chromene ring system is inclined at dihedral angles of 14.21 (9) and 9.91 (10)°, respectively, with respect to the thia-zole and benzene rings. The thia-zole ring makes a dihedral angle of 24.06 (11)° with the benzene ring. In the crystal structure, O-H⋯O hydrogen bonds link the mol-ecules into a zigzag chain along [20]. Weak N-H⋯O and C-H⋯O inter-actions connect the chains into a three-dimensional network. π-π stacking inter-actions with a centroid-centroid distance of 3.4209 (14) Å are also observed between the chains.

Entities:  

Year:  2010        PMID: 21587863      PMCID: PMC3006946          DOI: 10.1107/S1600536810021604

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For a related structure, see: Arshad et al. (2010 ▶). For the synthesis, see: Siddiqui et al. (2009 ▶); Liu et al. (2008 ▶). For general background to and the biological activity of coumarin derivatives, see: Anderson et al. (2002 ▶); Finn et al. (2004 ▶); Hofmanova et al. (1998 ▶). For the biological activity of amino­thia­zole derivatives, see: Hiremath et al. (1992 ▶); Gursoy & Karah (2000 ▶); Jayashree et al. (2005 ▶); Patt et al. (1992 ▶). For bond-length data, see: Allen et al. (1987 ▶). For the stability of the temperature controller used for the data collection, see: Cosier & Glazer (1986 ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

C20H15N3O3S M = 377.41 Monoclinic, a = 9.1117 (16) Å b = 16.225 (3) Å c = 12.113 (2) Å β = 104.657 (3)° V = 1732.5 (5) Å3 Z = 4 Mo Kα radiation μ = 0.21 mm−1 T = 100 K 0.38 × 0.06 × 0.05 mm

Data collection

Bruker SMART APEXII DUO CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.922, T max = 0.990 16535 measured reflections 3957 independent reflections 2932 reflections with I > 2σ(I) R int = 0.060

Refinement

R[F 2 > 2σ(F 2)] = 0.045 wR(F 2) = 0.161 S = 1.10 3957 reflections 253 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.40 e Å−3 Δρmin = −0.41 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810021604/is2557sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810021604/is2557Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C20H15N3O3SF(000) = 784
Mr = 377.41Dx = 1.447 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2347 reflections
a = 9.1117 (16) Åθ = 2.8–27.3°
b = 16.225 (3) ŵ = 0.21 mm1
c = 12.113 (2) ÅT = 100 K
β = 104.657 (3)°Needle, yellow
V = 1732.5 (5) Å30.38 × 0.06 × 0.05 mm
Z = 4
Bruker SMART APEXII DUO CCD area-detector diffractometer3957 independent reflections
Radiation source: fine-focus sealed tube2932 reflections with I > 2σ(I)
graphiteRint = 0.060
φ and ω scansθmax = 27.5°, θmin = 2.1°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −11→11
Tmin = 0.922, Tmax = 0.990k = −21→21
16535 measured reflectionsl = −15→15
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.045Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.161H atoms treated by a mixture of independent and constrained refinement
S = 1.10w = 1/[σ2(Fo2) + (0.0927P)2] where P = (Fo2 + 2Fc2)/3
3957 reflections(Δ/σ)max = 0.001
253 parametersΔρmax = 0.40 e Å3
0 restraintsΔρmin = −0.41 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cyrosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.38934 (7)0.12646 (3)0.08727 (5)0.01862 (18)
O1−0.03963 (18)−0.12925 (9)0.20648 (14)0.0161 (4)
O20.05580 (19)−0.00659 (10)0.25771 (15)0.0200 (4)
O30.8063 (2)0.48865 (10)−0.15666 (16)0.0223 (4)
N10.2563 (2)−0.00002 (11)−0.02742 (17)0.0157 (4)
N20.4034 (2)0.07847 (12)−0.12284 (19)0.0180 (4)
N30.4819 (2)0.15129 (11)−0.11761 (17)0.0153 (4)
C10.0479 (3)−0.06337 (13)0.1917 (2)0.0155 (5)
C2−0.0638 (2)−0.19722 (13)0.1346 (2)0.0148 (5)
C3−0.1574 (3)−0.25933 (14)0.1574 (2)0.0181 (5)
H3A−0.2042−0.25440.21700.022*
C4−0.1785 (3)−0.32860 (14)0.0888 (2)0.0198 (5)
H4A−0.2406−0.37080.10250.024*
C5−0.1085 (3)−0.33653 (14)−0.0009 (2)0.0212 (5)
H5A−0.1237−0.3838−0.04580.025*
C6−0.0166 (3)−0.27378 (14)−0.0225 (2)0.0190 (5)
H6A0.0295−0.2789−0.08250.023*
C70.0075 (2)−0.20265 (13)0.0454 (2)0.0152 (5)
C80.1015 (3)−0.13536 (13)0.0300 (2)0.0147 (5)
H8A0.1499−0.1381−0.02890.018*
C90.1230 (2)−0.06783 (13)0.0976 (2)0.0146 (5)
C100.2180 (2)0.00109 (13)0.07732 (19)0.0138 (5)
C110.2764 (3)0.06418 (14)0.1475 (2)0.0194 (5)
H11A0.25820.07300.21880.023*
C120.3457 (2)0.06236 (13)−0.0311 (2)0.0151 (5)
C130.5341 (3)0.17206 (13)−0.2030 (2)0.0160 (5)
C140.6101 (2)0.25398 (13)−0.1918 (2)0.0150 (5)
C150.5766 (3)0.31265 (14)−0.1168 (2)0.0184 (5)
H15A0.50770.2996−0.07450.022*
C160.6444 (3)0.38995 (14)−0.1045 (2)0.0207 (5)
H16A0.62130.4280−0.05410.025*
C170.7469 (3)0.41031 (13)−0.1679 (2)0.0177 (5)
C180.7836 (3)0.35256 (13)−0.2415 (2)0.0159 (5)
H18A0.85410.3655−0.28260.019*
C190.7150 (3)0.27562 (13)−0.2536 (2)0.0166 (5)
H19A0.73920.2377−0.30380.020*
C200.5172 (3)0.12174 (14)−0.3094 (2)0.0208 (5)
H20A0.41220.1084−0.34030.031*
H20B0.57490.0718−0.29140.031*
H20C0.55370.1528−0.36440.031*
H12N0.364 (3)0.0512 (15)−0.186 (2)0.016 (7)*
H13O0.894 (4)0.491 (2)−0.176 (3)0.060 (11)*
U11U22U33U12U13U23
S10.0201 (3)0.0173 (3)0.0188 (3)−0.0056 (2)0.0057 (3)−0.0023 (2)
O10.0168 (8)0.0155 (8)0.0185 (9)−0.0017 (6)0.0093 (7)−0.0006 (6)
O20.0204 (9)0.0213 (8)0.0198 (9)−0.0021 (6)0.0081 (8)−0.0047 (7)
O30.0233 (10)0.0163 (8)0.0321 (11)−0.0043 (7)0.0162 (9)−0.0022 (7)
N10.0157 (10)0.0157 (9)0.0173 (11)−0.0020 (7)0.0070 (9)0.0005 (7)
N20.0210 (11)0.0158 (9)0.0193 (12)−0.0052 (8)0.0089 (9)−0.0005 (8)
N30.0126 (9)0.0149 (9)0.0176 (11)−0.0022 (7)0.0023 (8)0.0020 (7)
C10.0134 (11)0.0169 (10)0.0156 (12)0.0005 (8)0.0024 (9)0.0012 (9)
C20.0131 (11)0.0149 (10)0.0152 (12)0.0017 (8)0.0016 (9)0.0007 (8)
C30.0165 (11)0.0222 (11)0.0162 (12)0.0000 (9)0.0053 (10)0.0032 (9)
C40.0169 (12)0.0190 (11)0.0236 (14)−0.0052 (9)0.0050 (10)0.0024 (9)
C50.0224 (13)0.0186 (11)0.0213 (14)−0.0040 (9)0.0033 (11)−0.0030 (10)
C60.0200 (12)0.0212 (11)0.0162 (13)−0.0018 (9)0.0055 (10)−0.0020 (9)
C70.0141 (11)0.0162 (10)0.0143 (12)0.0013 (8)0.0017 (9)0.0010 (8)
C80.0144 (11)0.0188 (11)0.0114 (12)0.0017 (8)0.0041 (9)0.0018 (8)
C90.0122 (11)0.0164 (10)0.0161 (12)0.0010 (8)0.0054 (9)0.0020 (9)
C100.0109 (11)0.0170 (10)0.0127 (12)0.0016 (8)0.0018 (9)0.0028 (8)
C110.0227 (12)0.0187 (11)0.0194 (13)−0.0024 (9)0.0100 (11)0.0000 (9)
C120.0129 (11)0.0161 (10)0.0159 (12)0.0014 (8)0.0029 (9)0.0017 (9)
C130.0129 (11)0.0174 (11)0.0178 (13)0.0009 (8)0.0041 (10)0.0027 (9)
C140.0127 (11)0.0179 (11)0.0140 (12)0.0011 (8)0.0027 (9)0.0037 (9)
C150.0174 (12)0.0202 (11)0.0207 (13)−0.0025 (9)0.0106 (10)0.0015 (9)
C160.0243 (13)0.0168 (11)0.0246 (14)−0.0010 (9)0.0127 (12)−0.0037 (9)
C170.0183 (12)0.0125 (10)0.0233 (14)−0.0009 (8)0.0073 (10)0.0027 (9)
C180.0139 (11)0.0193 (11)0.0162 (12)0.0004 (8)0.0067 (10)0.0028 (9)
C190.0166 (11)0.0188 (11)0.0149 (12)0.0033 (8)0.0049 (10)0.0015 (9)
C200.0208 (12)0.0223 (12)0.0198 (13)−0.0039 (9)0.0061 (11)−0.0015 (10)
S1—C111.730 (2)C6—H6A0.9300
S1—C121.735 (2)C7—C81.429 (3)
O1—C11.372 (3)C8—C91.352 (3)
O1—C21.388 (3)C8—H8A0.9300
O2—C11.210 (3)C9—C101.472 (3)
O3—C171.375 (3)C10—C111.351 (3)
O3—H13O0.89 (4)C11—H11A0.9300
N1—C121.307 (3)C13—C141.489 (3)
N1—C101.399 (3)C13—C201.500 (3)
N2—C121.369 (3)C14—C191.400 (3)
N2—N31.374 (3)C14—C151.401 (3)
N2—H12N0.88 (3)C15—C161.389 (3)
N3—C131.288 (3)C15—H15A0.9300
C1—C91.471 (3)C16—C171.391 (3)
C2—C31.393 (3)C16—H16A0.9300
C2—C71.397 (3)C17—C181.391 (3)
C3—C41.382 (3)C18—C191.387 (3)
C3—H3A0.9300C18—H18A0.9300
C4—C51.397 (3)C19—H19A0.9300
C4—H4A0.9300C20—H20A0.9600
C5—C61.385 (3)C20—H20B0.9600
C5—H5A0.9300C20—H20C0.9600
C6—C71.402 (3)
C11—S1—C1287.85 (11)C11—C10—C9128.6 (2)
C1—O1—C2122.81 (18)N1—C10—C9115.73 (19)
C17—O3—H13O112 (2)C10—C11—S1110.99 (18)
C12—N1—C10108.79 (19)C10—C11—H11A124.5
C12—N2—N3115.41 (19)S1—C11—H11A124.5
C12—N2—H12N117.1 (17)N1—C12—N2123.1 (2)
N3—N2—H12N124.5 (17)N1—C12—S1116.75 (18)
C13—N3—N2118.8 (2)N2—C12—S1120.13 (17)
O2—C1—O1116.5 (2)N3—C13—C14114.7 (2)
O2—C1—C9126.0 (2)N3—C13—C20124.7 (2)
O1—C1—C9117.55 (19)C14—C13—C20120.6 (2)
O1—C2—C3117.3 (2)C19—C14—C15117.8 (2)
O1—C2—C7120.29 (19)C19—C14—C13122.7 (2)
C3—C2—C7122.4 (2)C15—C14—C13119.5 (2)
C4—C3—C2117.9 (2)C16—C15—C14121.3 (2)
C4—C3—H3A121.1C16—C15—H15A119.4
C2—C3—H3A121.1C14—C15—H15A119.4
C3—C4—C5121.4 (2)C15—C16—C17119.8 (2)
C3—C4—H4A119.3C15—C16—H16A120.1
C5—C4—H4A119.3C17—C16—H16A120.1
C6—C5—C4119.7 (2)O3—C17—C16117.8 (2)
C6—C5—H5A120.1O3—C17—C18122.3 (2)
C4—C5—H5A120.1C16—C17—C18119.8 (2)
C5—C6—C7120.5 (2)C19—C18—C17120.0 (2)
C5—C6—H6A119.8C19—C18—H18A120.0
C7—C6—H6A119.8C17—C18—H18A120.0
C2—C7—C6118.1 (2)C18—C19—C14121.3 (2)
C2—C7—C8117.6 (2)C18—C19—H19A119.4
C6—C7—C8124.3 (2)C14—C19—H19A119.4
C9—C8—C7122.7 (2)C13—C20—H20A109.5
C9—C8—H8A118.7C13—C20—H20B109.5
C7—C8—H8A118.7H20A—C20—H20B109.5
C8—C9—C1119.0 (2)C13—C20—H20C109.5
C8—C9—C10121.0 (2)H20A—C20—H20C109.5
C1—C9—C10120.02 (19)H20B—C20—H20C109.5
C11—C10—N1115.6 (2)
C12—N2—N3—C13−177.2 (2)C8—C9—C10—N112.9 (3)
C2—O1—C1—O2177.4 (2)C1—C9—C10—N1−166.16 (19)
C2—O1—C1—C9−2.4 (3)N1—C10—C11—S1−1.4 (3)
C1—O1—C2—C3−178.8 (2)C9—C10—C11—S1176.69 (18)
C1—O1—C2—C72.9 (3)C12—S1—C11—C100.95 (18)
O1—C2—C3—C4−177.9 (2)C10—N1—C12—N2180.0 (2)
C7—C2—C3—C40.3 (4)C10—N1—C12—S1−0.4 (2)
C2—C3—C4—C50.0 (4)N3—N2—C12—N1173.3 (2)
C3—C4—C5—C6−0.4 (4)N3—N2—C12—S1−6.3 (3)
C4—C5—C6—C70.4 (4)C11—S1—C12—N1−0.31 (19)
O1—C2—C7—C6177.9 (2)C11—S1—C12—N2179.3 (2)
C3—C2—C7—C6−0.3 (3)N2—N3—C13—C14176.85 (19)
O1—C2—C7—C8−1.6 (3)N2—N3—C13—C20−0.7 (3)
C3—C2—C7—C8−179.8 (2)N3—C13—C14—C19158.3 (2)
C5—C6—C7—C2−0.1 (3)C20—C13—C14—C19−24.1 (3)
C5—C6—C7—C8179.4 (2)N3—C13—C14—C15−21.8 (3)
C2—C7—C8—C9−0.1 (3)C20—C13—C14—C15155.9 (2)
C6—C7—C8—C9−179.6 (2)C19—C14—C15—C160.4 (4)
C7—C8—C9—C10.5 (3)C13—C14—C15—C16−179.6 (2)
C7—C8—C9—C10−178.6 (2)C14—C15—C16—C170.4 (4)
O2—C1—C9—C8−179.2 (2)C15—C16—C17—O3177.3 (2)
O1—C1—C9—C80.7 (3)C15—C16—C17—C18−1.4 (4)
O2—C1—C9—C10−0.1 (4)O3—C17—C18—C19−177.0 (2)
O1—C1—C9—C10179.81 (19)C16—C17—C18—C191.6 (4)
C12—N1—C10—C111.2 (3)C17—C18—C19—C14−0.9 (4)
C12—N1—C10—C9−177.19 (19)C15—C14—C19—C18−0.1 (3)
C8—C9—C10—C11−165.2 (2)C13—C14—C19—C18179.8 (2)
C1—C9—C10—C1115.7 (4)
D—H···AD—HH···AD···AD—H···A
N2—H12N···O3i0.88 (2)2.36 (2)3.213 (3)164 (2)
O3—H13O···O2ii0.89 (4)1.87 (4)2.743 (3)169 (3)
C5—H5A···O3iii0.932.463.386 (3)173
C11—H11A···O20.932.392.915 (3)115
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H12N⋯O3i0.88 (2)2.36 (2)3.213 (3)164 (2)
O3—H13O⋯O2ii0.89 (4)1.87 (4)2.743 (3)169 (3)
C5—H5A⋯O3iii0.932.463.386 (3)173
C11—H11A⋯O20.932.392.915 (3)115

Symmetry codes: (i) ; (ii) ; (iii) .

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Authors:  Samina Khan Yusufzai; Hasnah Osman; Aisyah Saad Abdul Rahim; Suhana Arshad; Ibrahim Abdul Razak
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-07-10

3.  Ethyl 2-[(2-oxo-2H-chromen-7-yl)-oxy]acetate.

Authors:  Hoong-Kun Fun; Ching Kheng Quah; Krishnendu Aich; Sangita Das; Shyamaprosad Goswami
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-03-06
  3 in total

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