Literature DB >> 25552555

Imaging local electric fields produced upon synchrotron X-ray exposure.

Christopher M Dettmar1, Justin A Newman1, Scott J Toth1, Michael Becker2, Robert F Fischetti2, Garth J Simpson3.   

Abstract

Electron-hole separation following hard X-ray absorption during diffraction analysis of soft materials under cryogenic conditions produces substantial local electric fields visualizable by second harmonic generation (SHG) microscopy. Monte Carlo simulations of X-ray photoelectron trajectories suggest the formation of substantial local electric fields in the regions adjacent to those exposed to X-rays, indicating a possible electric-field-induced SHG (EFISH) mechanism for generating the observed signal. In studies of amorphous vitreous solvents, analysis of the SHG spatial profiles following X-ray microbeam exposure was consistent with an EFISH mechanism. Within protein crystals, exposure to 12-keV (1.033-Å) X-rays resulted in increased SHG in the region extending ∼ 3 μm beyond the borders of the X-ray beam. Moderate X-ray exposures typical of those used for crystal centering by raster scanning through an X-ray beam were sufficient to produce static electric fields easily detectable by SHG. The X-ray-induced SHG activity was observed with no measurable loss for longer than 2 wk while maintained under cryogenic conditions, but disappeared if annealed to room temperature for a few seconds. These results provide direct experimental observables capable of validating simulations of X-ray-induced damage within soft materials. In addition, X-ray-induced local fields may potentially impact diffraction resolution through localized piezoelectric distortions of the lattice.

Entities:  

Keywords:  EFISH; X-ray damage; piezoelectric; structural biology; synchrotron

Mesh:

Year:  2014        PMID: 25552555      PMCID: PMC4311798          DOI: 10.1073/pnas.1407771112

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  22 in total

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Authors:  Raimond B G Ravelli; Pascal Theveneau; Sean McSweeney; Martin Caffrey
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2.  Structural changes in a cryo-cooled protein crystal owing to radiation damage.

Authors:  W P Burmeister
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2000-03

3.  Towards the measurement of ideal data for macromolecular crystallography using synchrotron sources.

Authors:  J R Helliwell; S Ealick; P Doing; T Irving; M Szebenyi
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1993-01-01

4.  Non-invasive measurement of X-ray beam heating on a surrogate crystal sample.

Authors:  Edward H Snell; Henry D Bellamy; Gerd Rosenbaum; Mark J van der Woerd
Journal:  J Synchrotron Radiat       Date:  2006-12-15       Impact factor: 2.616

5.  Radiation damage in protein crystals is reduced with a micron-sized X-ray beam.

Authors:  Ruslan Sanishvili; Derek W Yoder; Sudhir Babu Pothineni; Gerd Rosenbaum; Shenglan Xu; Stefan Vogt; Sergey Stepanov; Oleg A Makarov; Stephen Corcoran; Richard Benn; Venugopalan Nagarajan; Janet L Smith; Robert F Fischetti
Journal:  Proc Natl Acad Sci U S A       Date:  2011-03-28       Impact factor: 11.205

6.  Absorption of 20-eV to 50,000-eV electron beams in air and plastic.

Authors:  A Cole
Journal:  Radiat Res       Date:  1969-04       Impact factor: 2.841

7.  Primary radiation damage of protein crystals by an intense synchrotron X-ray beam.

Authors:  T Y Teng; K Moffat
Journal:  J Synchrotron Radiat       Date:  2000-09-01       Impact factor: 2.616

8.  Stabilization of an unusual salt bridge in ubiquitin by the extra C-terminal domain of the proteasome-associated deubiquitinase UCH37 as a mechanism of its exo specificity.

Authors:  Marie E Morrow; Myung-Il Kim; Judith A Ronau; Michael J Sheedlo; Rhiannon R White; Joseph Chaney; Lake N Paul; Markus A Lill; Katerina Artavanis-Tsakonas; Chittaranjan Das
Journal:  Biochemistry       Date:  2013-05-09       Impact factor: 3.162

9.  Radiation damage in macromolecular crystallography: what is it and why should we care?

Authors:  Elspeth F Garman
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

10.  Colouring cryo-cooled crystals: online microspectrophotometry.

Authors:  John McGeehan; Raimond B G Ravelli; James W Murray; Robin Leslie Owen; Florent Cipriani; Sean McSweeney; Martin Weik; Elspeth F Garman
Journal:  J Synchrotron Radiat       Date:  2009-02-25       Impact factor: 2.616

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  2 in total

1.  Dynamic X-ray diffraction sampling for protein crystal positioning.

Authors:  Nicole M Scarborough; G M Dilshan P Godaliyadda; Dong Hye Ye; David J Kissick; Shijie Zhang; Justin A Newman; Michael J Sheedlo; Azhad U Chowdhury; Robert F Fischetti; Chittaranjan Das; Gregery T Buzzard; Charles A Bouman; Garth J Simpson
Journal:  J Synchrotron Radiat       Date:  2017-01-01       Impact factor: 2.616

2.  Guiding synchrotron X-ray diffraction by multimodal video-rate protein crystal imaging.

Authors:  Justin A Newman; Shijie Zhang; Shane Z Sullivan; Ximeng Y Dow; Michael Becker; Michael J Sheedlo; Sergey Stepanov; Mark S Carlsen; R Michael Everly; Chittaranjan Das; Robert F Fischetti; Garth J Simpson
Journal:  J Synchrotron Radiat       Date:  2016-05-16       Impact factor: 2.616

  2 in total

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