Literature DB >> 6572974

Nanosecond absorption spectroscopy of hemoglobin: elementary processes in kinetic cooperativity.

J Hofrichter, J H Sommer, E R Henry, W A Eaton.   

Abstract

A nanosecond absorption spectrometer has been used to measure the optical spectra of hemoglobin between 3 ns and 100 ms after photolysis of the CO complex. The data from a single experiment comprise a surface, defined by the time-ordered set of 50-100 spectra. Singular value decomposition is used to represent the observed spectra in terms of a minimal set of basis spectra and the time course of their amplitudes. Both CO rebinding and conformational changes are found to be multiphasic. Prior to the quaternary structural change, two relaxations are observed that are assigned to geminate recombination followed by a tertiary structural change. These relaxations are interpreted in terms of a kinetic model that points out their potential role in kinetic cooperativity. The rapid escape of CO from the heme pocket compared with the rate of rebinding observed for both R and T quaternary states shows that the quaternary structure controls the overall dissociation rate by changing the rate at which the Fe--CO bond is broken. A comparable description of the control of the overall association rates must await a more complete experimental description of the kinetics of the quaternary T state.

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Year:  1983        PMID: 6572974      PMCID: PMC393793          DOI: 10.1073/pnas.80.8.2235

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  20 in total

1.  Dissociation of CO from carboxyhemoglobin.

Authors:  V S Sharma; M R Schmidt; H M Ranney
Journal:  J Biol Chem       Date:  1976-07-25       Impact factor: 5.157

2.  The photochemical formation of a quickly reacting form of haemoglobin.

Authors:  Q H GIBSON
Journal:  Biochem J       Date:  1959-02       Impact factor: 3.857

3.  An allosteric model of hemoglobin. I. Kinetics.

Authors:  J J Hopfield; R G Shulman; S Ogawa
Journal:  J Mol Biol       Date:  1971-10-28       Impact factor: 5.469

4.  Stereochemistry of cooperative effects in haemoglobin.

Authors:  M F Perutz
Journal:  Nature       Date:  1970-11-21       Impact factor: 49.962

5.  Recombination kinetics following nanosecond laser photolysis of carbonmonoxyhaemogloblin.

Authors:  R Catterall; D A Duddell; R J Morris; J T Richards
Journal:  Biochim Biophys Acta       Date:  1982-07-26

6.  Geminate recombination of O2 and hemoglobin.

Authors:  D A Chernoff; R M Hochstrasser; A W Steele
Journal:  Proc Natl Acad Sci U S A       Date:  1980-10       Impact factor: 11.205

7.  Stopped-flow, rapid mixing measurements of ligand binding to hemoglobin and red cells.

Authors:  J S Olson
Journal:  Methods Enzymol       Date:  1981       Impact factor: 1.600

8.  Transient Raman study of CO-haemoprotein photolysis: origin of the quantum yield.

Authors:  J M Friedman; K B Lyons
Journal:  Nature       Date:  1980-04-10       Impact factor: 49.962

9.  Transient haem-globin interactions in photodeligated carboxyhaemoglobin and subunits.

Authors:  L Lindqvist; S El Mohsni; F Tfibel; B Alpert
Journal:  Nature       Date:  1980-12-25       Impact factor: 49.962

10.  Kinetic studies on the binding affinity of human hemoglobin for the 4th carbon monoxide molecule, L4.

Authors:  A DeYoung; R R Pennelly; A L Tan-Wilson; R W Noble
Journal:  J Biol Chem       Date:  1976-11-10       Impact factor: 5.157

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  48 in total

1.  Multiple geminate ligand recombinations in human hemoglobin.

Authors:  R M Esquerra; R A Goldbeck; S H Reaney; A M Batchelder; Y Wen; J W Lewis; D S Kliger
Journal:  Biophys J       Date:  2000-06       Impact factor: 4.033

2.  New insights into allosteric mechanisms from trapping unstable protein conformations in silica gels.

Authors:  Cristiano Viappiani; Stefano Bettati; Stefano Bruno; Luca Ronda; Stefania Abbruzzetti; Andrea Mozzarelli; William A Eaton
Journal:  Proc Natl Acad Sci U S A       Date:  2004-09-22       Impact factor: 11.205

3.  Structural dynamics of ligand diffusion in the protein matrix: A study on a new myoglobin mutant Y(B10) Q(E7) R(E10).

Authors:  M Brunori; F Cutruzzolà; C Savino; C Travaglini-Allocatelli; B Vallone; Q H Gibson
Journal:  Biophys J       Date:  1999-03       Impact factor: 4.033

4.  Protein structural dynamics in solution unveiled via 100-ps time-resolved x-ray scattering.

Authors:  Hyun Sun Cho; Naranbaatar Dashdorj; Friedrich Schotte; Timothy Graber; Robert Henning; Philip Anfinrud
Journal:  Proc Natl Acad Sci U S A       Date:  2010-04-06       Impact factor: 11.205

5.  Application of linear free energy relations to protein conformational changes: the quaternary structural change of hemoglobin.

Authors:  W A Eaton; E R Henry; J Hofrichter
Journal:  Proc Natl Acad Sci U S A       Date:  1991-05-15       Impact factor: 11.205

6.  Motion of proximal histidine and structural allosteric transition in soluble guanylate cyclase.

Authors:  Byung-Kuk Yoo; Isabelle Lamarre; Jean-Louis Martin; Fabrice Rappaport; Michel Negrerie
Journal:  Proc Natl Acad Sci U S A       Date:  2015-03-23       Impact factor: 11.205

7.  Allosteric action in real time: time-resolved crystallographic studies of a cooperative dimeric hemoglobin.

Authors:  James E Knapp; Reinhard Pahl; Vukica Srajer; William E Royer
Journal:  Proc Natl Acad Sci U S A       Date:  2006-05-09       Impact factor: 11.205

8.  Rate of allosteric change in hemoglobin measured by modulated excitation using fluorescence detection.

Authors:  A J Martino; F A Ferrone
Journal:  Biophys J       Date:  1989-10       Impact factor: 4.033

9.  The effect of water on the rate of conformational change in protein allostery.

Authors:  R A Goldbeck; S J Paquette; D S Kliger
Journal:  Biophys J       Date:  2001-11       Impact factor: 4.033

Review 10.  Myoglobin strikes back.

Authors:  Maurizio Brunori
Journal:  Protein Sci       Date:  2010-02       Impact factor: 6.725

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