Literature DB >> 25513764

Divide and control: split design of multi-input DNA logic gates.

Yulia V Gerasimova1, Dmitry M Kolpashchikov.   

Abstract

Logic gates made of DNA have received significant attention as biocompatible building blocks for molecular circuits. The majority of DNA logic gates, however, are controlled by the minimum number of inputs: one, two or three. Here we report a strategy to design a multi-input logic gate by splitting a DNA construct.

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Year:  2014        PMID： 25513764      PMCID： PMC4494086          DOI： 10.1039/c4cc08241a

Source DB:  PubMed          Journal:  Chem Commun (Camb)        ISSN： 1359-7345            Impact factor:   6.222


  33 in total

Review 1.  Enzyme-based logic systems for information processing.

Authors:  Evgeny Katz; Vladimir Privman
Journal:  Chem Soc Rev       Date:  2010-03-09       Impact factor: 54.564

2.  Enzyme-free nucleic acid logic circuits.

Authors:  Georg Seelig; David Soloveichik; David Yu Zhang; Erik Winfree
Journal:  Science       Date:  2006-12-08       Impact factor: 47.728

3.  Deoxyribozyme-based three-input logic gates and construction of a molecular full adder.

Authors:  Harvey Lederman; Joanne Macdonald; Darko Stefanovic; Milan N Stojanovic
Journal:  Biochemistry       Date:  2006-01-31       Impact factor: 3.162

4.  Three-input majority logic gate and multiple input logic circuit based on DNA strand displacement.

Authors:  Wei Li; Yang Yang; Hao Yan; Yan Liu
Journal:  Nano Lett       Date:  2013-05-30       Impact factor: 11.189

5.  A binary deoxyribozyme for nucleic acid analysis.

Authors:  Dmitry M Kolpashchikov
Journal:  Chembiochem       Date:  2007-11-23       Impact factor: 3.164

6.  Nucleic acid detection using MNAzymes.

Authors:  Yulia V Gerasimova; Dmitry M Kolpashchikov
Journal:  Chem Biol       Date:  2010-02-26

7.  Visual displays that directly interface and provide read-outs of molecular states via molecular graphics processing units.

Authors:  Julia E Poje; Tamara Kastratovic; Andrew R Macdonald; Ana C Guillermo; Steven E Troetti; Omar J Jabado; M Leigh Fanning; Darko Stefanovic; Joanne Macdonald
Journal:  Angew Chem Int Ed Engl       Date:  2014-07-09       Impact factor: 15.336

8.  Intelligent layered nanoflare: "lab-on-a-nanoparticle" for multiple DNA logic gate operations and efficient intracellular delivery.

Authors:  Bin Yang; Xiao-Bing Zhang; Li-Ping Kang; Zhi-Mei Huang; Guo-Li Shen; Ru-Qin Yu; Weihong Tan
Journal:  Nanoscale       Date:  2014-08-07       Impact factor: 7.790

9.  Catalytic molecular logic devices by DNAzyme displacement.

Authors:  Carl W Brown; Matthew R Lakin; Darko Stefanovic; Steven W Graves
Journal:  Chembiochem       Date:  2014-04-01       Impact factor: 3.164

10.  MicroRNA: An emerging therapeutic target and intervention tool.

Authors:  Zhen Liu; Alhousseynou Sall; Decheng Yang
Journal:  Int J Mol Sci       Date:  2008-06-13       Impact factor: 6.208
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  4 in total

1.  Alphanumerical Visual Display Made of DNA Logic Gates for Drug Susceptibility Testing of Pathogens.

Authors:  Ryan P Connelly; Evgeny S Morozkin; Yulia V Gerasimova
Journal:  Chembiochem       Date:  2018-01-04       Impact factor: 3.164

2.  Bridging the Two Worlds: A Universal Interface between Enzymatic and DNA Computing Systems.

Authors:  Shay Mailloux; Yulia V Gerasimova; Nataliia Guz; Dmitry M Kolpashchikov; Evgeny Katz
Journal:  Angew Chem Int Ed Engl       Date:  2015-04-09       Impact factor: 15.336

3.  A mutation-resistant deoxyribozyme OR gate for highly selective detection of viral nucleic acids.

Authors:  Ola Kamar; Sin-Cih Sun; Chieh-Hua Lin; Wan-Yu Chung; Min-Shi Lee; Yu-Chieh Liao; Dmitry M Kolpashchikov; Min-Chieh Chuang
Journal:  Chem Commun (Camb)       Date:  2017-09-21       Impact factor: 6.222

4.  DNA Computing Systems Activated by Electrochemically-triggered DNA Release from a Polymer-brush-modified Electrode Array.

Authors:  Maria Gamella; Andrey Zakharchenko; Nataliia Guz; Madeline Masi; Sergiy Minko; Dmitry M Kolpashchikov; Heiko Iken; Arshak Poghossian; Michael J Schöning; Evgeny Katz
Journal:  Electroanalysis       Date:  2016-08-05       Impact factor: 3.223
  4 in total

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