Literature DB >> 29206338

Alphanumerical Visual Display Made of DNA Logic Gates for Drug Susceptibility Testing of Pathogens.

Ryan P Connelly1, Evgeny S Morozkin1, Yulia V Gerasimova1.   

Abstract

Molecular diagnostics of drug-resistant pathogens require the analysis of point mutations in bacterial or viral genomes, which is usually performed by trained professionals and/or by sophisticated computer algorithms. We have developed a DNA-based logic system that autonomously analyzes mutations found in the genome of Mycobacterium tuberculosis complex (MTC) bacteria and communicates the output to a human user as alphanumeric characters read by the naked eye. The five-gate system displays "O" ("no infection") for the absence of MTC infection and "P" or "F" for passing or failing a drug-susceptibility test, respectively.
© 2018 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  DNA logic gates; G-quadruplexes; deoxyribozymes; peroxidases; rifampin susceptibility

Mesh:

Substances:

Year:  2018        PMID: 29206338      PMCID: PMC5962014          DOI: 10.1002/cbic.201700626

Source DB:  PubMed          Journal:  Chembiochem        ISSN: 1439-4227            Impact factor:   3.164


  30 in total

Review 1.  Drug-resistant tuberculosis: past, present, future.

Authors:  Chen-Yuan Chiang; Rosella Centis; Giovanni Battista Migliori
Journal:  Respirology       Date:  2010-03-19       Impact factor: 6.424

2.  Visual detection of DNA from salmonella and mycobacterium using split DNAzymes.

Authors:  Aw Kang Lie Darius; Neo Jia Ling; Uttamchandani Mahesh
Journal:  Mol Biosyst       Date:  2010-03-19

Review 3.  Binary probes for nucleic acid analysis.

Authors:  Dmitry M Kolpashchikov
Journal:  Chem Rev       Date:  2010-08-11       Impact factor: 60.622

4.  Split DNA enzyme for visual single nucleotide polymorphism typing.

Authors:  Dmitry M Kolpashchikov
Journal:  J Am Chem Soc       Date:  2008-02-19       Impact factor: 15.419

5.  Characterization of the G-quadruplex structure of a catalytic DNA with peroxidase activity.

Authors:  De-Ming Kong; Li-Li Cai; Jun-Hong Guo; Jing Wu; Han-Xi Shen
Journal:  Biopolymers       Date:  2009-05       Impact factor: 2.505

6.  Highly effective colorimetric and visual detection of nucleic acids using an asymmetrically split peroxidase DNAzyme.

Authors:  Minggang Deng; Dan Zhang; Yangyang Zhou; Xiang Zhou
Journal:  J Am Chem Soc       Date:  2008-09-03       Impact factor: 15.419

7.  Visual SNP genotyping using asymmetric PCR and split DNA enzymes.

Authors:  Jia Ling Neo; Kanglie Darius Aw; Mahesh Uttamchandani
Journal:  Analyst       Date:  2011-03-07       Impact factor: 4.616

8.  DNA-based peroxidation catalyst--what is the exact role of topology on catalysis and is there a special binding site for catalysis?

Authors:  Shizuka Nakayama; Jingxin Wang; Herman O Sintim
Journal:  Chemistry       Date:  2011-04-05       Impact factor: 5.236

9.  A DNA Logic Gate Automaton for Detection of Rabies and Other Lyssaviruses.

Authors:  Pavithra Vijayakumar; Joanne Macdonald
Journal:  Chemphyschem       Date:  2017-05-03       Impact factor: 3.102

Review 10.  Biosensors with built-in biomolecular logic gates for practical applications.

Authors:  Yu-Hsuan Lai; Sin-Cih Sun; Min-Chieh Chuang
Journal:  Biosensors (Basel)       Date:  2014-08-27
View more
  1 in total

1.  Toward a Rational Approach to Design Split G-Quadruplex Probes.

Authors:  Ryan P Connelly; Charles Verduzco; Serena Farnell; Tamar Yishay; Yulia V Gerasimova
Journal:  ACS Chem Biol       Date:  2019-10-22       Impact factor: 5.100

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.