Literature DB >> 25481125

Biased diffusion in tubes of alternating diameter: analytical treatment in the case of strong bias.

Vladimir Yu Zitserman1, Alexander M Berezhkovskii2, Anatoly E Antipov3, Yurii A Makhnovskii4.   

Abstract

This paper is devoted to the effective transport coefficients of a particle in a tube of alternating diameter. Analytical expressions are derived for the effective mobility and diffusivity under strong bias conditions, i.e., in the limiting case where the external biasing force tends to infinity. The expressions give the transport coefficients as functions of the geometric parameters of the tube and the external force. They show that the effective diffusivity is a linear function of the square of the external force, whereas the effective mobility is independent of the force. The problem of finding effective transport coefficients in a tube of alternating diameter is too complex to be analyzed by conventional methods. Therefore, the expressions are derived in the framework of an intuition-based approach and validated by Brownian dynamics simulations. The obtained results extend a short list of available analytical expressions for the effective transport coefficients.

Mesh:

Year:  2014        PMID: 25481125      PMCID: PMC4257964          DOI: 10.1063/1.4902552

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  12 in total

1.  Communication: drift velocity of Brownian particle in a periodically tapered tube induced by a time-periodic force with zero mean: dependence on the force period.

Authors:  V Yu Zitserman; A M Berezhkovskii; A E Antipov; Yu A Makhnovskii
Journal:  J Chem Phys       Date:  2011-09-28       Impact factor: 3.488

2.  Mobility in periodic channels formed by cylindrical cavities.

Authors:  Fabio Marchesoni
Journal:  J Chem Phys       Date:  2010-04-28       Impact factor: 3.488

3.  Variance of residence time spent by diffusing particle in a sub-domain. Path integral based approach.

Authors:  A M Berezhkovskii
Journal:  Chem Phys       Date:  2010-05-01       Impact factor: 2.348

4.  Communications: Drift and diffusion in a tube of periodically varying diameter. Driving force induced intermittency.

Authors:  Alexander M Berezhkovskii; Leonardo Dagdug; Yurii A Makhnovskii; Vladimir Yu Zitserman
Journal:  J Chem Phys       Date:  2010-06-14       Impact factor: 3.488

5.  Biased diffusion in tubes formed by spherical compartments.

Authors:  Alexander M Berezhkovskii; Leonardo Dagdug
Journal:  J Chem Phys       Date:  2010-10-07       Impact factor: 3.488

6.  Transient diffusion in a tube with dead ends.

Authors:  Leonardo Dagdug; Alexander M Berezhkovskii; Yurii A Makhnovskii; Vladimir Yu Zitserman
Journal:  J Chem Phys       Date:  2007-12-14       Impact factor: 3.488

Review 7.  Diffusion in confined geometries.

Authors:  P Sekhar Burada; Peter Hänggi; Fabio Marchesoni; Gerhard Schmid; Peter Talkner
Journal:  Chemphyschem       Date:  2009-01-12       Impact factor: 3.102

8.  Mapping of forced diffusion in quasi-one-dimensional systems.

Authors:  Pavol Kalinay
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2009-09-04

9.  Analytical treatment of biased diffusion in tubes with periodic dead ends.

Authors:  Alexander M Berezhkovskii; Leonardo Dagdug
Journal:  J Chem Phys       Date:  2011-03-28       Impact factor: 3.488

10.  Discriminating between anomalous diffusion and transient behavior in microheterogeneous environments.

Authors:  Alexander M Berezhkovskii; Leonardo Dagdug; Sergey M Bezrukov
Journal:  Biophys J       Date:  2014-01-21       Impact factor: 4.033

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  1 in total

1.  Biased diffusion in tubes of alternating diameter: Numerical study over a wide range of biasing force.

Authors:  Yurii A Makhnovskii; Alexander M Berezhkovskii; Anatoly E Antipov; Vladimir Yu Zitserman
Journal:  J Chem Phys       Date:  2015-11-07       Impact factor: 3.488

  1 in total

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