Literature DB >> 21456647

Analytical treatment of biased diffusion in tubes with periodic dead ends.

Alexander M Berezhkovskii1, Leonardo Dagdug.   

Abstract

Effective mobility and diffusion coefficient of a particle in a tube with identical periodic dead ends characterize the motion on large time scale, when the particle displacement significantly exceeds the tube period. We derive formulas that show how these transport coefficients depend on the driving force and the geometric parameters of the system. Numerical tests show that values of the transport coefficients obtained from Brownian dynamics simulations are in excellent agreement with our theoretical predictions.

Mesh:

Year:  2011        PMID: 21456647      PMCID: PMC3078163          DOI: 10.1063/1.3567187

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  43 in total

1.  Surface relaxation and the long-time diffusion coefficient in porous media: Periodic geometries.

Authors: 
Journal:  Phys Rev B Condens Matter       Date:  1994-01-01

2.  Mobility in periodic channels formed by cylindrical cavities.

Authors:  Fabio Marchesoni
Journal:  J Chem Phys       Date:  2010-04-28       Impact factor: 3.488

3.  Cell cavities increase tortuosity in brain extracellular space.

Authors:  A Tao; L Tao; C Nicholson
Journal:  J Theor Biol       Date:  2005-06-21       Impact factor: 2.691

4.  A channel Brownian pump powered by an unbiased external force.

Authors:  Bao-Quan Ai; Liang-Gang Liu
Journal:  J Chem Phys       Date:  2008-01-14       Impact factor: 3.488

5.  One-dimensional description of diffusion in a tube of abruptly changing diameter: Boundary homogenization based approach.

Authors:  Alexander M Berezhkovskii; Alexander V Barzykin; Vladimir Yu Zitserman
Journal:  J Chem Phys       Date:  2009-12-14       Impact factor: 3.488

6.  Entropic transport: a test bed for the Fick-Jacobs approximation.

Authors:  P Sekhar Burada; Gerhard Schmid; Peter Hänggi
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2009-08-28       Impact factor: 4.226

7.  Rectification currents in two-dimensional artificial channels.

Authors:  Fabio Marchesoni; Sergey Savel'ev
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2009-07-17

8.  Directed transport driven by the transverse wall vibration.

Authors:  Bao-quan Ai
Journal:  J Chem Phys       Date:  2009-08-07       Impact factor: 3.488

9.  Communication: Turnover behavior of effective mobility in a tube with periodic entropy potential.

Authors:  Leonardo Dagdug; Alexander M Berezhkovskii; Yurii A Makhnovskii; Vladimir Yu Zitserman; Sergey M Bezrukov
Journal:  J Chem Phys       Date:  2011-03-14       Impact factor: 3.488

Review 10.  Contribution of dead-space microdomains to tortuosity of brain extracellular space.

Authors:  Sabina Hrabetová; Charles Nicholson
Journal:  Neurochem Int       Date:  2004-09       Impact factor: 3.921

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  2 in total

1.  Biased diffusion in tubes of alternating diameter: analytical treatment in the case of strong bias.

Authors:  Vladimir Yu Zitserman; Alexander M Berezhkovskii; Anatoly E Antipov; Yurii A Makhnovskii
Journal:  J Chem Phys       Date:  2014-12-07       Impact factor: 3.488

2.  Biased diffusion in three-dimensional comb-like structures.

Authors:  Alexander M Berezhkovskii; Leonardo Dagdug; Sergey M Bezrukov
Journal:  J Chem Phys       Date:  2015-04-07       Impact factor: 3.488

  2 in total

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