Literature DB >> 25468967

Stoichiometry and geometry of the CXC chemokine receptor 4 complex with CXC ligand 12: molecular modeling and experimental validation.

Irina Kufareva1, Bryan S Stephens2, Lauren G Holden2, Ling Qin2, Chunxia Zhao2, Tetsuya Kawamura2, Ruben Abagyan2, Tracy M Handel1.   

Abstract

Chemokines and their receptors regulate cell migration during development, immune system function, and in inflammatory diseases, making them important therapeutic targets. Nevertheless, the structural basis of receptor:chemokine interaction is poorly understood. Adding to the complexity of the problem is the persistently dimeric behavior of receptors observed in cell-based studies, which in combination with structural and mutagenesis data, suggest several possibilities for receptor:chemokine complex stoichiometry. In this study, a combination of computational, functional, and biophysical approaches was used to elucidate the stoichiometry and geometry of the interaction between the CXC-type chemokine receptor 4 (CXCR4) and its ligand CXCL12. First, relevance and feasibility of a 2:1 stoichiometry hypothesis was probed using functional complementation experiments with multiple pairs of complementary nonfunctional CXCR4 mutants. Next, the importance of dimers of WT CXCR4 was explored using the strategy of dimer dilution, where WT receptor dimerization is disrupted by increasing expression of nonfunctional CXCR4 mutants. The results of these experiments were supportive of a 1:1 stoichiometry, although the latter could not simultaneously reconcile existing structural and mutagenesis data. To resolve the contradiction, cysteine trapping experiments were used to derive residue proximity constraints that enabled construction of a validated 1:1 receptor:chemokine model, consistent with the paradigmatic two-site hypothesis of receptor activation. The observation of a 1:1 stoichiometry is in line with accumulating evidence supporting monomers as minimal functional units of G protein-coupled receptors, and suggests transmission of conformational changes across the dimer interface as the most probable mechanism of altered signaling by receptor heterodimers.

Entities:  

Keywords:  GPCR dimerization; chemokine receptor; cysteine trapping; functional complementation; molecular docking

Mesh:

Substances:

Year:  2014        PMID: 25468967      PMCID: PMC4273337          DOI: 10.1073/pnas.1417037111

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  83 in total

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  33 in total

1.  Functional anatomy of the full-length CXCR4-CXCL12 complex systematically dissected by quantitative model-guided mutagenesis.

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Review 4.  New paradigms in chemokine receptor signal transduction: Moving beyond the two-site model.

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5.  Disulfide Trapping for Modeling and Structure Determination of Receptor: Chemokine Complexes.

Authors:  Irina Kufareva; Martin Gustavsson; Lauren G Holden; Ling Qin; Yi Zheng; Tracy M Handel
Journal:  Methods Enzymol       Date:  2016-01-13       Impact factor: 1.600

Review 6.  What Do Structures Tell Us About Chemokine Receptor Function and Antagonism?

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Review 10.  Chemokines and their receptors: insights from molecular modeling and crystallography.

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